Eric Coissac 1f0233d033 refactor: make hwlocality optional and streamline release workflow ...

Extracts release creation into a dedicated `create-release` job that outputs a shared `release_id`, allowing downstream build jobs to upload binaries directly and ensuring atomic initialization. Introduces a `numa` feature flag for `obikindex` to make `hwlocality` optional, providing graceful fallbacks like a synthetic UMA node when disabled. Also bumps `obikmer` to 1.1.16.

2026-06-23 08:53:37 +02:00

..

obicompactvec

feat: add benchmark pipeline, expose APIs, and enforce strict paths

2026-06-22 10:18:33 +02:00

obidebruinj

feat: add benchmark pipeline, expose APIs, and enforce strict paths

2026-06-22 10:18:33 +02:00

obifastwrite

refactor: extract obikindex crate and remove deprecated CLI commands

2026-05-20 18:54:12 +02:00

obikindex

refactor: make hwlocality optional and streamline release workflow

2026-06-23 08:53:37 +02:00

obikmer

refactor: make hwlocality optional and streamline release workflow

2026-06-23 08:53:37 +02:00

obikpartitionner

feat: add vectorized column filters and optimize partitioner iteration

2026-06-22 09:54:51 +02:00

obikrope

✨ add PhantomData import for generic type safety

2026-04-30 07:04:03 +02:00

obikseq

refactor: optimize unitig iteration and graph traversal

2026-06-05 19:48:59 +02:00

obilayeredmap

feat: add optimized new_ones constructor for all-ones bit vectors

2026-06-22 10:00:01 +02:00

obipipeline

feat: add pipeline concurrency throttling and HPC build docs

2026-06-15 10:33:23 +02:00

obiread

perf: enable zero-allocation queries and memory-mapped indexes

2026-06-03 10:24:12 +02:00

obiskbuilder

refactor: migrate pipeline to NucPage-based stream processing

2026-05-29 09:10:25 +02:00

obiskio

feat: add iter_canonical_kmers iterator and tests

2026-05-30 16:30:02 +02:00

obisys

feat: add CPU-aware parallel worker pool for partition merging

2026-06-13 11:58:20 +02:00

obitaxonomy

feat: introduce obitaxonomy crate for hierarchical taxonomy parsing

2026-06-22 10:24:04 +02:00

Cargo.lock

refactor: make hwlocality optional and streamline release workflow

2026-06-23 08:53:37 +02:00

Cargo.toml

feat: add benchmark pipeline, expose APIs, and enforce strict paths

2026-06-22 10:18:33 +02:00

profile.json.gz

🗑️ Refactor entropy and minimizer logic into RollingStat

2026-04-20 16:45:57 +02:00

Synthese.docx

📦 Add obipipeline crate and refactor path handling

2026-04-23 21:06:11 +02:00