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obikmer/Makefile
T
Eric Coissac 1a839a295a
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feat: add numa feature flag and automate release workflow
Refactor the Gitea release pipeline to generate releases via API and upload binaries using a shared ID. Automate changelog generation by fetching recent commits with `jj log` and producing markdown notes via `aichat`. Convert `hwlocality` to an optional dependency gated by a default `numa` feature, providing fallback implementations for graceful degradation when NUMA support is disabled. Bump obikmer to 1.1.18.
2026-06-23 09:07:04 +02:00

98 lines
3.4 KiB
Makefile

VENV := .venv
PYTHON := $(VENV)/bin/python
PIP := $(VENV)/bin/pip
MKDOCS := $(VENV)/bin/mkdocs
CARGO_DIR := src
DOC_DIR := docmd
DOC_FILE := mkdocs.yml
DOC_SITE := doc
DOC_PORT := 8001
# ── virtualenv ────────────────────────────────────────────────────────────────
$(VENV)/bin/activate:
python3 -m venv $(VENV)
$(MKDOCS): $(VENV)/bin/activate
$(PIP) install --quiet --upgrade pip
$(PIP) install --quiet \
livereload watchdog \
mkdocs mkdocs-material \
mkdocs-mermaid2-plugin \
mkdocs-bibtex
$(PIP) install --quiet --upgrade InSilicoSeq
# ── obikmer binary ───────────────────────────────────────────────────────────
PROFILE_FILE := profile.pb
PPROF_PORT := 8081
.PHONY: obikmer
obikmer:
cargo build --release --manifest-path $(CARGO_DIR)/Cargo.toml --bin obikmer
.PHONY: debug
debug:
cargo build --manifest-path $(CARGO_DIR)/Cargo.toml --bin obikmer
.PHONY: profile-build
profile-build:
cargo build --release --manifest-path $(CARGO_DIR)/Cargo.toml \
--bin obikmer --features obikmer/profiling
.PHONY: profile-view
profile-view:
go tool pprof -http=127.0.0.1:$(PPROF_PORT) $(PROFILE_FILE)
# ── documentation ─────────────────────────────────────────────────────────────
.PHONY: doc
doc: $(MKDOCS)
$(MKDOCS) build -f $(DOC_FILE)
.PHONY: doc-serve
doc-serve: $(MKDOCS)
$(MKDOCS) serve -f $(DOC_FILE) \
--dev-addr=127.0.0.1:$(DOC_PORT) \
--livereload
.PHONY: clean-doc
clean-doc:
rm -rf $(DOC_SITE)/
.PHONY: clean
clean: clean-doc
rm -rf $(VENV)
# ── release ───────────────────────────────────────────────────────────────────
CARGO_TOML := $(CARGO_DIR)/obikmer/Cargo.toml
.PHONY: bump-version
bump-version:
@current=$$(grep '^version = ' $(CARGO_TOML) | head -n 1 | sed 's/version = "\(.*\)"/\1/'); \
if [ -n "$(RELEASE)" ]; then \
new_version="$(RELEASE)"; \
else \
major=$$(echo $$current | cut -d. -f1); \
minor=$$(echo $$current | cut -d. -f2); \
patch=$$(echo $$current | cut -d. -f3); \
new_patch=$$((patch + 1)); \
new_version="$$major.$$minor.$$new_patch"; \
fi; \
echo "Version: $$current -> $$new_version"; \
sed -i.bak "s/^version = \"$$current\"/version = \"$$new_version\"/" $(CARGO_TOML) && \
rm $(CARGO_TOML).bak
.PHONY: release
release: bump-version
@jj auto-describe
@jj git push --change @
@new_version=$$(grep '^version = ' $(CARGO_TOML) | head -n 1 | sed 's/version = "\(.*\)"/\1/'); \
git_hash=$$(jj log -r @ --no-graph -T 'commit_id'); \
commits=$$(jj log -r 'latest(tags())..@' --no-graph -T 'description ++ "\n"' 2>/dev/null || \
jj log --no-graph -T 'description ++ "\n"' --limit 30); \
notes=$$(printf 'Write concise markdown release notes for obikmer (a Rust kmer genomics tool). Be technical and direct. Base them strictly on these commit messages:\n\n%s' "$$commits" | aichat); \
git tag -a "v$$new_version" -m "$$notes" "$$git_hash" && \
git push origin "v$$new_version"