From 813e3958ba9aa23ed29d356fa086860924037650 Mon Sep 17 00:00:00 2001
From: Eric Coissac <eric.coissac@metabarcoding.org>
Date: Mon, 9 Nov 2015 17:35:59 +0100
Subject: [PATCH] Change minimum length for considering a match from 1000 to
 100.

Former-commit-id: 6bd827ca011ee71d83e98710edc837f56a089875
Former-commit-id: 454f080c0b163f238951541eec23b5946f914f28
---
 detectors/normalize/lib/lookforIR.lib.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/detectors/normalize/lib/lookforIR.lib.sh b/detectors/normalize/lib/lookforIR.lib.sh
index 3b35206..94ea75b 100644
--- a/detectors/normalize/lib/lookforIR.lib.sh
+++ b/detectors/normalize/lib/lookforIR.lib.sh
@@ -26,7 +26,7 @@ function lookForIR {
 		       -query ${QUERY} \
 		       -outfmt 6 \
 		       -max_target_seqs 10000 | \
-		  awk '($4 > 1000) && ($3>80) { \
+		  awk '($4 > 100) && ($3>80) { \
 		             SAME=(($7 < $8) && ($9 < $10)) || (($7 > $8) && ($9 > $10)); \
 			 		 if ($7 < $8) \
 			 			{print substr($2,1,3),$7,$8,SAME}  \