From bee9fd0a0ddb6ffd8cb50227307934ce43bd1d83 Mon Sep 17 00:00:00 2001
From: Eric Coissac <eric.coissac@metabarcoding.org>
Date: Mon, 12 Jun 2023 09:18:45 +0200
Subject: [PATCH] Update Makefile to remove compilation of some software
 programs easily installable using package managers

Former-commit-id: 4d9f33c71f5e85c4cdea0303c20efb266685015f
Former-commit-id: d2e8c10c31065889ae35715e69869c42a38e8d41
---
 src/Makefile | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/src/Makefile b/src/Makefile
index 1ba116a..fc9aec9 100755
--- a/src/Makefile
+++ b/src/Makefile
@@ -18,11 +18,8 @@
 include ../config/auto.conf
 
 DIRS = aragorn   \
-       clustalo  \
        exonerate \
-       hmmer3    \
        kimono    \
-       muscle    \
        ncbiblast \
        prokov    \
        repseek   \
@@ -30,8 +27,11 @@ DIRS = aragorn   \
        sumaclust \
        sumatra   \
        getopt    \
-       cd-hit	 \
        ITSx
+#       muscle    \
+#       clustalo  \
+#       cd-hit	 \
+#       hmmer3    \
 
 include ../config/targets/propagate.targ