diff --git a/summarize_annot.sh b/summarize_annot.sh new file mode 100755 index 0000000..ab8101f --- /dev/null +++ b/summarize_annot.sh @@ -0,0 +1,12 @@ +#!/bin/bash + +egrep "^FT (CDS|rRNA|tRNA) |/gene=" $1 \ + | awk ' + /\/gene=/ && (gene!=1) { + print $0; + gene=1 + } + /^FT (CDS|rRNA|tRNA)/ { + print $0; + gene=0 + }' \ No newline at end of file