From fc821d6be8c4441475b4482e3ee14e010a25b2b4 Mon Sep 17 00:00:00 2001
From: Eric Coissac <eric.coissac@metabarcoding.org>
Date: Thu, 25 Jan 2018 08:53:27 +0100
Subject: [PATCH] Final small changes to patch the bug related to complex
 filenames

Former-commit-id: c59d7b5e7f8c8f37e955e44b354521c312cfc2c4
Former-commit-id: e9d8bc55d4542b276e91104672ba7dddb53c0c6a
---
 detectors/cds/bin/go_cds.csh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/detectors/cds/bin/go_cds.csh b/detectors/cds/bin/go_cds.csh
index ecfe64b..96c46d1 100755
--- a/detectors/cds/bin/go_cds.csh
+++ b/detectors/cds/bin/go_cds.csh
@@ -83,7 +83,7 @@ foreach dir ("core" "shell" "dust")
   endif
 end
 
-cp $temp/$Genome.cds.fasta $Genome.cds.fasta 
+cp $temp/genome.cds.fasta $Genome.cds.fasta 
 
 #
 # pass2: transsplicing