# # Make chloro DB's for use by CDS prediction program # mkdir myDB mkdir myDB/download cp GBKorEMBLEntries myDB/download [optional cp ORG_HOME/data/cds/chlorodb/parameters.sh myDB myDB/parameters.sh ] go_chlorodb.sh myDB and... wait... (typical time : 5h for 500 Entries) then (after checking) mv ORG_HOME/data/cds/chlorodb ORG_HOME/data/cds/chlorodb.old mv myDB ORG_HOME/data/cds/chlorodb # # notes # calculation of models currently requires R (without any specific package) this will be replaced in the future... in addition, optional graphics output (plot.models.r) requires the following graphic packages : grid gridExtra vcd plotrix