diff --git a/src/ecopcr.c b/src/ecopcr.c
index c531335..92e543d 100644
--- a/src/ecopcr.c
+++ b/src/ecopcr.c
@@ -6,7 +6,7 @@
 #include <getopt.h>
 
 
-#define VERSION "0.8.0"
+#define VERSION "1.0.0"
 
 
 /* ----------------------------------------------- */
@@ -80,7 +80,7 @@ static void PrintHelp()
         PP      "column 21 : sequence\n");
         PP      "column 22 : definition\n");
         PP      "------------------------------------------\n");
-        PP		" http://www.grenoble.prabi.fr/trac/ecoPCR/\n");
+        PP		" https://git.metabarcoding.org/obitools/ecopcr/wikis/home\n");
         PP      "------------------------------------------\n\n");        
         PP      "\n");
 
@@ -566,11 +566,11 @@ int main(int argc, char **argv)
 		        )
 		     {
 		
-				scname = taxonomy->taxons->taxon[seq->taxid].name;
-				strncpy(head,seq->SQ,10);
-				head[10]=0;
-				strncpy(tail,seq->SQ+seq->SQ_length-10,10);
-				tail[10]=0;
+				//scname = taxonomy->taxons->taxon[seq->taxid].name;
+				//strncpy(head,seq->SQ,10);
+				//head[10]=0;
+				//strncpy(tail,seq->SQ+seq->SQ_length-10,10);
+				//tail[10]=0;
 		
 				apatseq=ecoseq2apatseq(seq,apatseq,circular);
 				
@@ -613,15 +613,17 @@ int main(int argc, char **argv)
 										errj  =apatseq->hiterr[1]->val[j];
 										length = 0;
 										if (posj > posi)
-											length=posj - posi  - o1->patlen - o2->patlen; 
+											length = posj - posi - o1->patlen - o2->patlen;
 										if (posj < posi)
-											length= posj + apatseq->seqlen - posi - o1->patlen - o2->patlen;
-										if (length &&
+											//length = posj + apatseq->seqlen - posi - o1->patlen - o2->patlen;   // TODO
+											length = posi - posj - o1->patlen - o2->patlen;
+										if ((length>0) &&	// For when primers touch or overlap
 											(!lmin || (length >= lmin)) &&
-										    (!lmax || (length <= lmax)))
+											(!lmax || (length <= lmax)))
+										{
 										    printRepeat(seq,oligo1,oligo2,&tparm,o1,o2c,'D',kingdom_mode,posi,posj,erri,errj,taxonomy,delta);
 											//printf("%s\tD\t%s...%s (%d)\t%d\t%d\t%d\t%d\t%s\n",seq->AC,head,tail,seq->SQ_length,o1Hits,o2cHits,posi,posj,scname);
-	
+										}
 									}
 								}
 							}
@@ -666,15 +668,18 @@ int main(int argc, char **argv)
 
 										length = 0;
 										if (posj > posi)
-											length=posj - posi + 1  - o2->patlen - o1->patlen; /* - o1->patlen : suppress by <EC> */
+											//length = posj - posi + 1  - o2->patlen - o1->patlen; /* - o1->patlen : deleted by <EC> (prior to the OBITools3) */ TODO ????
+											length = posj - posi - o2->patlen - o1->patlen;
 										if (posj < posi)
-											length= posj + apatseq->seqlen - posi - o1->patlen - o2->patlen;
-
-										if (length &&
+											//length = posj + apatseq->seqlen - posi - o1->patlen - o2->patlen; TODO ????
+											length = posi - posj - o2->patlen - o1->patlen;
+										if ((length>0) &&	// For when primers touch or overlap
 											(!lmin || (length >= lmin)) &&
-										    (!lmax || (length <= lmax)))
+											(!lmax || (length <= lmax)))
+										{
 										    printRepeat(seq,oligo1,oligo2,&tparm,o2,o1c,'R',kingdom_mode,posi,posj,erri,errj,taxonomy,delta);
-											//printf("%s\tR\t%s...%s (%d)\t%d\t%d\t%d\t%d\t%s\n",seq->AC,head,tail,seq->SQ_length,o2Hits,o1cHits,posi,posj,scname);								
+											//printf("%s\tR\t%s...%s (%d)\t%d\t%d\t%d\t%d\t%s\n",seq->AC,head,tail,seq->SQ_length,o2Hits,o1cHits,posi,posj,scname);
+										}
 									}
 								}
 							}