diff --git a/src/ecoprimer.c b/src/ecoprimer.c index 4f1724d..deb6127 100644 --- a/src/ecoprimer.c +++ b/src/ecoprimer.c @@ -57,6 +57,7 @@ static void PrintHelp() PP "-l : minimum [L]ength : define the minimum amplication length. \n\n"); PP "-L : maximum [L]ength : define the maximum amplicationlength. \n\n"); PP "-r : [R]estricts the search to the given taxonomic id (restrict the example taxon set).\n\n"); + PP "-E : [E]xception taxid allows to indicate than some subclade of example sequences are conterexamples.\n\n"); PP "-c : Consider that the database sequences are [c]ircular\n\n"); PP "-3 : Three prime strict match\n\n"); PP "-q : Strict matching [q]uorum, percentage of the sequences in which strict primers are found. By default it is 70\n\n");