diff --git a/src/libecoprimer/pairs.c b/src/libecoprimer/pairs.c index a11030d..88fc9f5 100644 --- a/src/libecoprimer/pairs.c +++ b/src/libecoprimer/pairs.c @@ -188,7 +188,7 @@ static void buildPrimerPairsForOneSeq(uint32_t seqid, bool_t strand; //char prmr[50]; //float mtemp; - word_t w1, w1a, omask = (0x1L << options->strict_three_prime) -1;; + word_t w1, w1a, omask = (0x1L << (options->strict_three_prime*2)) -1; word_t w2, w2a, wtmp; uint32_t bp1,bp2;