setup.py

@@ -193,7 +193,8 @@ def findCython(root,base=None,pyrexs=None):
             pyrexs.append(Extension('.'.join(base+[module,path.splitext(path.basename(pyrex))[0]]),[pyrex]))
             pyrexs[-1].sources.extend(glob.glob(os.path.splitext(pyrex)[0]+'.ext.*.c'))
             print pyrexs[-1].sources
-            Main.compile([pyrex],timestamps=True,recursion=True)
+            Main.compile([pyrex],timestamps=True)
+#            Main.compile([pyrex],timestamps=True,recursion=True)
             
         pyrexs.extend(findCython(path.join(root,module),base+[module]))
     return pyrexs
@@ -220,7 +221,7 @@ def findC(root,base=None,pyrexs=None):
 #from obitools.version import version as obiversion
 #sys.path.pop(0)
 
-VERSION =  "1.0.000"
+VERSION =  "1.0.002"
 AUTHOR  = 'Eric Coissac'
 EMAIL   = 'eric@coissac.eu'
 URL     = 'metabarcoding.org/obitools'
@@ -256,13 +257,12 @@ setup(name="OBITools",
       classifiers=[
         'Development Status :: 5 - Production/Stable',
         'Environment :: Console',
-        'Intended Audience :: Research',
-        'License :: CeCILL-V2',
-        'Operating System :: Unix like',
+        'Intended Audience :: Science/Research',
+        'License :: Other/Proprietary License',
+        'Operating System :: Unix',
         'Programming Language :: Python',
         'Programming Language :: Python :: 2',
-        'Topic :: NGS Data processing',
-        'Topic :: DNA metabarcoding',
+        'Topic :: Scientific/Engineering :: Bio-Informatics',
         'Topic :: Utilities',
       ],
       version=VERSION,

src/obitools/ecopcr/__init__.py

@@ -8,7 +8,7 @@ import sys
 class EcoPCRFile(utils.ColumnFile):
     def __init__(self,stream):
         utils.ColumnFile.__init__(self,
-                                  stream, '|', True, 
+                                  stream, ' | ', True, 
                                   (str,int,int,
                                    str,int,str,
                                    int,str,int,

src/obitools/version.py

@@ -1,5 +1,5 @@
 major = 1
 minor = 0
-serial= '000'
+serial= '002'
 
 version = "%2d.%02d %s" % (major,minor,serial)