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test a new obitools script for organelle assembling

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This commit is contained in:
Eric Coissac
2012-06-18 15:38:42 +00:00
parent a14fcc5b59
commit 470f3bd883
1 changed files with 3 additions and 3 deletions
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6
src/obindex.py
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@ -126,7 +126,7 @@ if __name__ == '__main__':
create table sequence ( create table sequence (
id int primary key, id int primary key,
forward text, forward text,
reverse text, reverse text
); );
""") """)
@ -167,7 +167,7 @@ if __name__ == '__main__':
c = db.execute(""" c = db.execute("""
insert into sequence (id,forward,reverse) insert into sequence (id,forward,reverse)
values (%d,'%s','%s') values (%d,'%s','%s');
""" % (seqid,tseq[0],tseq[1])) """ % (seqid,tseq[0],tseq[1]))
db.commit() db.commit()
@ -183,7 +183,7 @@ if __name__ == '__main__':
wordid+=1 wordid+=1
c = db.execute(""" insert into composition (seqid,wid) values (%d,%d) """ % (seqid,wid)) c = db.execute(""" insert into composition (seqid,wid) values (%d,%d) ;""" % (seqid,wid))
db.commit() db.commit()