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Patch a bug for primers without tags

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This commit is contained in:
Eric Coissac
2012-06-26 21:49:04 +00:00
parent a2ecbace5e
commit 617638a4c1
1 changed files with 3 additions and 3 deletions
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6
src/obitools/word/_readindex.pyx
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@ -709,7 +709,7 @@ cdef class ReadIndex:
cdef char* pseq cdef char* pseq
cdef bytes bseqf cdef bytes bseqf
cdef bytes bseqr cdef bytes bseqr
cdef bytes n=b"/2" cdef bytes n=b"/1"
delta = <void*>word - <void*>self._buffer delta = <void*>word - <void*>self._buffer
delta/= self._seqsize delta/= self._seqsize
@ -717,9 +717,9 @@ cdef class ReadIndex:
start1=self._buffer+ delta * self._seqsize start1=self._buffer+ delta * self._seqsize
start2=start1 + self._seqsize / 2 start2=start1 + self._seqsize / 2
if word < start2: if word >= start2:
start1=start2 start1=start2
n=b"/1" n=b"/2"
if lock: if lock:
if GET_SEQUSED(start1[0])==1: if GET_SEQUSED(start1[0])==1: