doc/sphinx/source/attributes/cluster.rst

@@ -0,0 +1,8 @@
+cluster
+=======
+
+    A integer value indicating the cluster this sequence belongs to.
+    
+       
+    Attribute added by the programs:
+        - :doc:`obiannotate <../scripts/obiannotate>`

src/obitools/options/bioseqedittag.py

@@ -111,14 +111,14 @@ def addSequenceEditTagOptions(optionManager):
                              dest='taxonrank',
                              default=[],
                              type="string",
-                             help="add taxonomy annotation at a speciefied rank level")
+                             help="add taxonomy annotation at a specified rank level")
     
     group.add_option('-m','--mcl',
                              action="store", dest="mcl",
                              metavar="<mclfile>",
                              type="string",
                              default=None,
-                             help="split following mcl graph clustering partition")
+                             help="add cluster tag to sequences according to a mcl graph clustering partition")
     
     group.add_option('--uniq-id',
                              action="store_true", dest="uniqids",