284 lines
11 KiB
HTML
284 lines
11 KiB
HTML
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<a href="obitools-module.html">Package obitools</a> ::
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<a href="obitools.distances-module.html">Package distances</a> ::
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Class DistanceMatrix
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<!-- ==================== CLASS DESCRIPTION ==================== -->
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<h1 class="epydoc">Class DistanceMatrix</h1><span class="codelink"><a href="obitools.distances-pysrc.html#DistanceMatrix">source code</a></span><br /><br />
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<!-- ==================== INSTANCE METHODS ==================== -->
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<span class="summary-type"> </span>
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<td><span class="summary-sig"><a href="obitools.distances.DistanceMatrix-class.html#__init__" class="summary-sig-name">__init__</a>(<span class="summary-sig-arg">self</span>,
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<span class="summary-sig-arg">alignment</span>)</span><br />
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DistanceMatrix constructor.</td>
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<td align="right" valign="top">
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<span class="codelink"><a href="obitools.distances-pysrc.html#DistanceMatrix.__init__">source code</a></span>
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<span class="summary-type"> </span>
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<td><span class="summary-sig"><a name="evaluateDist"></a><span class="summary-sig-name">evaluateDist</span>(<span class="summary-sig-arg">self</span>,
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<span class="summary-sig-arg">x</span>,
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<span class="summary-sig-arg">y</span>)</span></td>
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<td align="right" valign="top">
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<span class="codelink"><a href="obitools.distances-pysrc.html#DistanceMatrix.evaluateDist">source code</a></span>
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<span class="summary-type"> </span>
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<td><span class="summary-sig"><a name="__getitem__"></a><span class="summary-sig-name">__getitem__</span>(<span class="summary-sig-arg">self</span>,
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<span class="summary-sig-arg">key</span>)</span></td>
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<span class="codelink"><a href="obitools.distances-pysrc.html#DistanceMatrix.__getitem__">source code</a></span>
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<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
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<code>__delattr__</code>,
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<code>__getattribute__</code>,
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<code>__hash__</code>,
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<code>__reduce__</code>,
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<code>__reduce_ex__</code>,
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<code>__setattr__</code>,
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<!-- ==================== PROPERTIES ==================== -->
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<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
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<code>__class__</code>
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<!-- ==================== METHOD DETAILS ==================== -->
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<a name="__init__"></a>
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<h3 class="epydoc"><span class="sig"><span class="sig-name">__init__</span>(<span class="sig-arg">self</span>,
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<span class="sig-arg">alignment</span>)</span>
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<br /><em class="fname">(Constructor)</em>
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</h3>
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</td><td align="right" valign="top"
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><span class="codelink"><a href="obitools.distances-pysrc.html#DistanceMatrix.__init__">source code</a></span>
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</td>
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</table>
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DistanceMatrix constructor.
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<dl class="fields">
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<dt>Parameters:</dt>
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<dd><ul class="nomargin-top">
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<li><strong class="pname"><code>alignment</code></strong> (obitools.align.Alignment) - aligment used to compute distance matrix</li>
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</ul></dd>
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<dt>Overrides:
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object.__init__
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<a href="epydoc-log.html">Generated by Epydoc
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3.0beta1 on Tue Apr 29 13:03:46 2008</a>
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