From 275d85dc5daf99054f40008058c27bfae0e4134f Mon Sep 17 00:00:00 2001
From: Celine Mercier <celine.mercier@metabarcoding.org>
Date: Sat, 28 Jul 2018 17:11:51 +0200
Subject: [PATCH] Cython: fixed a bug when reading an uncompressed file in
 binary mode where the first 4 characters would not be read

---
 python/obitools3/files/uncompress.pyx | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/python/obitools3/files/uncompress.pyx b/python/obitools3/files/uncompress.pyx
index 0de9180..59a1fd2 100644
--- a/python/obitools3/files/uncompress.pyx
+++ b/python/obitools3/files/uncompress.pyx
@@ -99,6 +99,8 @@ cdef class CompressedFile:
                 self.accessor = c(magic)
         
         if self.accessor is None:
+            if 'b' in magic.stream_mode:
+                magic.binary.seek(0)
             self.accessor = magic
         
         if ((hasattr(stream, 'headers') and