From 4d36538c6e006150148b6b4e59dcae9a4b463389 Mon Sep 17 00:00:00 2001
From: cmercier <cmercier@TunturiL>
Date: Fri, 17 Apr 2020 15:07:52 +0200
Subject: [PATCH] C: SSE lcs alignment: band-aid for memory bug I don't
 understand (triggered on specific db on ubuntu)

---
 python/obitools3/version.py    | 2 +-
 src/sse_banded_LCS_alignment.c | 3 +++
 2 files changed, 4 insertions(+), 1 deletion(-)

diff --git a/python/obitools3/version.py b/python/obitools3/version.py
index 12c12c0..606976a 100755
--- a/python/obitools3/version.py
+++ b/python/obitools3/version.py
@@ -1,5 +1,5 @@
 major = 3
 minor = 0
-serial= '0-beta14'
+serial= '0-beta14a'
 
 version ="%d.%02d.%s" % (major,minor,serial)
diff --git a/src/sse_banded_LCS_alignment.c b/src/sse_banded_LCS_alignment.c
index 63652ea..8ba90fc 100755
--- a/src/sse_banded_LCS_alignment.c
+++ b/src/sse_banded_LCS_alignment.c
@@ -686,6 +686,9 @@ int calculateSizeToAllocate(int maxLen, int LCSmin)
 	size *=  3;
 	size +=  16;
 
+	size += 10;  // band-aid for memory bug I don't understand (triggered on specific db on ubuntu)
+				 // bug might have to do with the way different systems behave when aligning the address in obi_get_memory_aligned_on_16
+
 	return(size*sizeof(int16_t));
 }