From 4e4cf46b1676b445dc18d3ed79d7694adef9a6ca Mon Sep 17 00:00:00 2001
From: Celine Mercier <celine.mercier@metabarcoding.org>
Date: Wed, 27 Apr 2016 10:44:24 +0200
Subject: [PATCH] Added all C files as source files for all cython files to
 stop having that kind of problem with linux systems

---
 .../obitools3/obidms/_obidmscolumn_bool.cfiles | 14 ++++++++++++--
 .../obitools3/obidms/_obidmscolumn_char.cfiles | 14 ++++++++++++--
 .../obidms/_obidmscolumn_float.cfiles          | 18 ++++++++++++++----
 .../obitools3/obidms/_obidmscolumn_int.cfiles  | 18 ++++++++++++++----
 .../obitools3/obidms/_obidmscolumn_seq.cfiles  | 14 ++++++++++++--
 .../obitools3/obidms/_obidmscolumn_str.cfiles  | 14 ++++++++++++--
 6 files changed, 76 insertions(+), 16 deletions(-)

diff --git a/python/obitools3/obidms/_obidmscolumn_bool.cfiles b/python/obitools3/obidms/_obidmscolumn_bool.cfiles
index 1ee8f82..9f0ab06 100644
--- a/python/obitools3/obidms/_obidmscolumn_bool.cfiles
+++ b/python/obitools3/obidms/_obidmscolumn_bool.cfiles
@@ -1,5 +1,3 @@
-../../../src/obidmscolumn_bool.c
-../../../src/obidmscolumn_bool.h
 ../../../src/bloom.h
 ../../../src/bloom.c
 ../../../src/char_str_indexer.h
@@ -39,3 +37,15 @@
 ../../../src/obiview.c
 ../../../src/utils.h
 ../../../src/utils.c
+../../../src/obidmscolumn_bool.c
+../../../src/obidmscolumn_bool.h
+../../../src/obidmscolumn_char.c
+../../../src/obidmscolumn_char.h
+../../../src/obidmscolumn_float.c
+../../../src/obidmscolumn_float.h
+../../../src/obidmscolumn_int.c
+../../../src/obidmscolumn_int.h
+../../../src/obidmscolumn_seq.c
+../../../src/obidmscolumn_seq.h
+../../../src/obidmscolumn_str.c
+../../../src/obidmscolumn_str.h
diff --git a/python/obitools3/obidms/_obidmscolumn_char.cfiles b/python/obitools3/obidms/_obidmscolumn_char.cfiles
index 4f67cb3..9f0ab06 100644
--- a/python/obitools3/obidms/_obidmscolumn_char.cfiles
+++ b/python/obitools3/obidms/_obidmscolumn_char.cfiles
@@ -1,5 +1,3 @@
-../../../src/obidmscolumn_char.c
-../../../src/obidmscolumn_char.h
 ../../../src/bloom.h
 ../../../src/bloom.c
 ../../../src/char_str_indexer.h
@@ -39,3 +37,15 @@
 ../../../src/obiview.c
 ../../../src/utils.h
 ../../../src/utils.c
+../../../src/obidmscolumn_bool.c
+../../../src/obidmscolumn_bool.h
+../../../src/obidmscolumn_char.c
+../../../src/obidmscolumn_char.h
+../../../src/obidmscolumn_float.c
+../../../src/obidmscolumn_float.h
+../../../src/obidmscolumn_int.c
+../../../src/obidmscolumn_int.h
+../../../src/obidmscolumn_seq.c
+../../../src/obidmscolumn_seq.h
+../../../src/obidmscolumn_str.c
+../../../src/obidmscolumn_str.h
diff --git a/python/obitools3/obidms/_obidmscolumn_float.cfiles b/python/obitools3/obidms/_obidmscolumn_float.cfiles
index 1bc1f0e..9f0ab06 100644
--- a/python/obitools3/obidms/_obidmscolumn_float.cfiles
+++ b/python/obitools3/obidms/_obidmscolumn_float.cfiles
@@ -1,9 +1,7 @@
-../../../src/obidmscolumn_float.c
-../../../src/obidmscolumn_float.h
-../../../src/char_str_indexer.h
-../../../src/char_str_indexer.c
 ../../../src/bloom.h
 ../../../src/bloom.c
+../../../src/char_str_indexer.h
+../../../src/char_str_indexer.c
 ../../../src/crc64.h
 ../../../src/crc64.c
 ../../../src/dna_seq_indexer.h
@@ -39,3 +37,15 @@
 ../../../src/obiview.c
 ../../../src/utils.h
 ../../../src/utils.c
+../../../src/obidmscolumn_bool.c
+../../../src/obidmscolumn_bool.h
+../../../src/obidmscolumn_char.c
+../../../src/obidmscolumn_char.h
+../../../src/obidmscolumn_float.c
+../../../src/obidmscolumn_float.h
+../../../src/obidmscolumn_int.c
+../../../src/obidmscolumn_int.h
+../../../src/obidmscolumn_seq.c
+../../../src/obidmscolumn_seq.h
+../../../src/obidmscolumn_str.c
+../../../src/obidmscolumn_str.h
diff --git a/python/obitools3/obidms/_obidmscolumn_int.cfiles b/python/obitools3/obidms/_obidmscolumn_int.cfiles
index 2b1168e..9f0ab06 100644
--- a/python/obitools3/obidms/_obidmscolumn_int.cfiles
+++ b/python/obitools3/obidms/_obidmscolumn_int.cfiles
@@ -1,9 +1,7 @@
-../../../src/obidmscolumn_int.c
-../../../src/obidmscolumn_int.h
-../../../src/char_str_indexer.h
-../../../src/char_str_indexer.c
 ../../../src/bloom.h
 ../../../src/bloom.c
+../../../src/char_str_indexer.h
+../../../src/char_str_indexer.c
 ../../../src/crc64.h
 ../../../src/crc64.c
 ../../../src/dna_seq_indexer.h
@@ -39,3 +37,15 @@
 ../../../src/obiview.c
 ../../../src/utils.h
 ../../../src/utils.c
+../../../src/obidmscolumn_bool.c
+../../../src/obidmscolumn_bool.h
+../../../src/obidmscolumn_char.c
+../../../src/obidmscolumn_char.h
+../../../src/obidmscolumn_float.c
+../../../src/obidmscolumn_float.h
+../../../src/obidmscolumn_int.c
+../../../src/obidmscolumn_int.h
+../../../src/obidmscolumn_seq.c
+../../../src/obidmscolumn_seq.h
+../../../src/obidmscolumn_str.c
+../../../src/obidmscolumn_str.h
diff --git a/python/obitools3/obidms/_obidmscolumn_seq.cfiles b/python/obitools3/obidms/_obidmscolumn_seq.cfiles
index 1dc1a64..9f0ab06 100644
--- a/python/obitools3/obidms/_obidmscolumn_seq.cfiles
+++ b/python/obitools3/obidms/_obidmscolumn_seq.cfiles
@@ -1,5 +1,3 @@
-../../../src/obidmscolumn_seq.c
-../../../src/obidmscolumn_seq.h
 ../../../src/bloom.h
 ../../../src/bloom.c
 ../../../src/char_str_indexer.h
@@ -39,3 +37,15 @@
 ../../../src/obiview.c
 ../../../src/utils.h
 ../../../src/utils.c
+../../../src/obidmscolumn_bool.c
+../../../src/obidmscolumn_bool.h
+../../../src/obidmscolumn_char.c
+../../../src/obidmscolumn_char.h
+../../../src/obidmscolumn_float.c
+../../../src/obidmscolumn_float.h
+../../../src/obidmscolumn_int.c
+../../../src/obidmscolumn_int.h
+../../../src/obidmscolumn_seq.c
+../../../src/obidmscolumn_seq.h
+../../../src/obidmscolumn_str.c
+../../../src/obidmscolumn_str.h
diff --git a/python/obitools3/obidms/_obidmscolumn_str.cfiles b/python/obitools3/obidms/_obidmscolumn_str.cfiles
index c2325aa..9f0ab06 100644
--- a/python/obitools3/obidms/_obidmscolumn_str.cfiles
+++ b/python/obitools3/obidms/_obidmscolumn_str.cfiles
@@ -1,5 +1,3 @@
-../../../src/obidmscolumn_str.c
-../../../src/obidmscolumn_str.h
 ../../../src/bloom.h
 ../../../src/bloom.c
 ../../../src/char_str_indexer.h
@@ -39,3 +37,15 @@
 ../../../src/obiview.c
 ../../../src/utils.h
 ../../../src/utils.c
+../../../src/obidmscolumn_bool.c
+../../../src/obidmscolumn_bool.h
+../../../src/obidmscolumn_char.c
+../../../src/obidmscolumn_char.h
+../../../src/obidmscolumn_float.c
+../../../src/obidmscolumn_float.h
+../../../src/obidmscolumn_int.c
+../../../src/obidmscolumn_int.h
+../../../src/obidmscolumn_seq.c
+../../../src/obidmscolumn_seq.h
+../../../src/obidmscolumn_str.c
+../../../src/obidmscolumn_str.h