From 58d0c850c2936e76f0581a170cec96611074ebd5 Mon Sep 17 00:00:00 2001 From: Celine Mercier Date: Fri, 15 Mar 2019 15:50:40 +0100 Subject: [PATCH] Made skip on error option True by default...... --- python/obitools3/apps/optiongroups/__init__.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/python/obitools3/apps/optiongroups/__init__.py b/python/obitools3/apps/optiongroups/__init__.py index c32c93b..e16a693 100755 --- a/python/obitools3/apps/optiongroups/__init__.py +++ b/python/obitools3/apps/optiongroups/__init__.py @@ -77,8 +77,8 @@ def __addImportInputOption(optionManager): group.add_argument('--skip-on-error', action="store_true", dest="obi:skiperror", - default=False, - help="Skip sequence entries with parse error") + default=True, + help="Skip sequence entries with parsing errors") group.add_argument('--no-quality', action="store_true", dest="obi:noquality",