diff --git a/python/obitools3/obidms/_obiseq.pyx b/python/obitools3/obidms/_obiseq.pyx index 11e990e..4eb9ac4 100644 --- a/python/obitools3/obidms/_obiseq.pyx +++ b/python/obitools3/obidms/_obiseq.pyx @@ -56,7 +56,7 @@ cdef class OBI_Nuc_Seq(OBI_Seq) : cdef class OBI_Nuc_Seq_Stored(OBIView_line) : - # TODO store the str version of column name macros + # TODO store the str version of column name macros? cpdef set_id(self, object id) : self[bytes2str(ID_COLUMN)] = id @@ -80,13 +80,13 @@ cdef class OBI_Nuc_Seq_Stored(OBIView_line) : if (type(quality) == list) or (quality is None) : self[bytes2str(QUALITY_COLUMN)] = quality else : # Quality is in str form - (((self.view).columns)[bytes2str(QUALITY_COLUMN)]).set_str_line(self.index, quality) + (((self._view).columns)[bytes2str(QUALITY_COLUMN)]).set_str_line(self._index, quality) cpdef object get_quality(self) : return self[bytes2str(QUALITY_COLUMN)] cpdef object get_str_quality(self) : - return ((self.view).columns)[bytes2str(QUALITY_COLUMN)].get_str_line(self.index) + return ((self._view).columns)[bytes2str(QUALITY_COLUMN)].get_str_line(self._index) # def __str__(self) : # return self[bytes2str(NUC_SEQUENCE_COLUMN)] # or not