From d159b921ebcfd502e63cb21fd6d6bf33baa0b836 Mon Sep 17 00:00:00 2001
From: Celine Mercier <celine.mercier@metabarcoding.org>
Date: Wed, 27 Apr 2016 13:14:19 +0200
Subject: [PATCH] Fixed obi import trying to print all lines at the end (source
 of segfault?)

---
 python/obitools3/commands/import.pyx | 9 +++++----
 1 file changed, 5 insertions(+), 4 deletions(-)

diff --git a/python/obitools3/commands/import.pyx b/python/obitools3/commands/import.pyx
index 7df883b..923a63a 100644
--- a/python/obitools3/commands/import.pyx
+++ b/python/obitools3/commands/import.pyx
@@ -106,7 +106,7 @@ def run(config):
         raise RuntimeError('No file format specified')
     
     # Temporary way to handle NA values
-    NA_list = ["nan"]
+    #NA_list = ["nan"]
     
     # Create DMS
     d = OBIDMS(config['obi']['defaultdms'])
@@ -126,10 +126,11 @@ def run(config):
             view[i][tag] = seq['tags'][tag]
         i+=1
 
-    print(view)
-   # print(view.__repr__())
+   #print(view)
+    print(view.__repr__())
 
     view.save_and_close()
     d.close()
-
+    
+    print("Done.")
         
\ No newline at end of file