From d32cfdcce5b3b4260dd927ee9042b4a7d2b67a19 Mon Sep 17 00:00:00 2001 From: Celine Mercier Date: Wed, 12 Feb 2020 14:23:17 +0100 Subject: [PATCH] ecotag: fixed the generated column comments formatting that would generate errors --- src/obi_ecotag.c | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/src/obi_ecotag.c b/src/obi_ecotag.c index 1c73c68..b498cfa 100755 --- a/src/obi_ecotag.c +++ b/src/obi_ecotag.c @@ -100,35 +100,35 @@ int print_assignment_result(Obiview_p output_view, index_t line, static int create_output_columns(Obiview_p o_view) { // Score column - if (obi_view_add_column(o_view, ECOTAG_SCORE_COLUMN_NAME, -1, NULL, OBI_FLOAT, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_SCORE_COLUMN_NAME, true) < 0) + if (obi_view_add_column(o_view, ECOTAG_SCORE_COLUMN_NAME, -1, NULL, OBI_FLOAT, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0) { obidebug(1, "\nError creating the column for the score in ecotag"); return -1; } // Assigned taxid column - if (obi_view_add_column(o_view, ECOTAG_TAXID_COLUMN_NAME, -1, NULL, OBI_INT, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_TAXID_COLUMN_NAME, true) < 0) + if (obi_view_add_column(o_view, ECOTAG_TAXID_COLUMN_NAME, -1, NULL, OBI_INT, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0) { obidebug(1, "\nError creating the column for the assigned taxid in ecotag"); return -1; } // Assigned scientific name column - if (obi_view_add_column(o_view, ECOTAG_NAME_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_NAME_COLUMN_NAME, true) < 0) + if (obi_view_add_column(o_view, ECOTAG_NAME_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0) { obidebug(1, "\nError creating the column for the assigned scientific name in ecotag"); return -1; } // Assignement status column - if (obi_view_add_column(o_view, ECOTAG_STATUS_COLUMN_NAME, -1, NULL, OBI_BOOL, 0, 1, NULL, false, false, false, NULL, NULL, -1, ECOTAG_STATUS_COLUMN_NAME, true) < 0) + if (obi_view_add_column(o_view, ECOTAG_STATUS_COLUMN_NAME, -1, NULL, OBI_BOOL, 0, 1, NULL, false, false, false, NULL, NULL, -1, "{}", true) < 0) { obidebug(1, "\nError creating the column for the assignment status in ecotag"); return -1; } // Column for array of best match ids - if (obi_view_add_column(o_view, ECOTAG_BEST_MATCH_IDS_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, true, false, NULL, NULL, -1, ECOTAG_BEST_MATCH_IDS_COLUMN_NAME, true) < 0) + if (obi_view_add_column(o_view, ECOTAG_BEST_MATCH_IDS_COLUMN_NAME, -1, NULL, OBI_STR, 0, 1, NULL, false, true, false, NULL, NULL, -1, "{}", true) < 0) { obidebug(1, "\nError creating the column for the array of ids of the best match in ecotag"); return -1;