From 7130f3a88d1974589ca4267500150311ac61e3fe Mon Sep 17 00:00:00 2001 From: Celine Mercier Date: Fri, 13 Dec 2019 11:17:37 +0100 Subject: [PATCH] mercier created page: Installing the OBITools3 --- Installing-the-OBITools3.md | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) create mode 100644 Installing-the-OBITools3.md diff --git a/Installing-the-OBITools3.md b/Installing-the-OBITools3.md new file mode 100644 index 0000000..d2969e1 --- /dev/null +++ b/Installing-the-OBITools3.md @@ -0,0 +1,20 @@ +Installing the OBITools3 +------------------------ + +The OBITools3 are now available to download from git, and will soon be on Nix ([pull request](https://github.com/NixOS/nixpkgs/pull/69644)). + +Requirements: **python3, python3-venv, git, CMake** + +Then you can do: + + git clone https://git.metabarcoding.org/obitools/obitools3.git + cd obitools3 + python3 -m venv obi3-env + . obi3-env/bin/activate + pip install cython + python3 setup.py install + . obi_completion_script.sh + +And test the installation with: + + obi test \ No newline at end of file