From bfd16d2d8ebd265a4ebbd9d4643dc77d58184c47 Mon Sep 17 00:00:00 2001 From: Celine Mercier Date: Wed, 9 Jun 2021 04:46:58 +0200 Subject: [PATCH] Update Wolf tutorial with the OBITools3 --- Wolf-tutorial-with-the-OBITools3.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Wolf-tutorial-with-the-OBITools3.md b/Wolf-tutorial-with-the-OBITools3.md index be268da..9a8c8c1 100644 --- a/Wolf-tutorial-with-the-OBITools3.md +++ b/Wolf-tutorial-with-the-OBITools3.md @@ -119,15 +119,15 @@ Otherwise, to build the database yourself from the start: obi import --embl EMBL wolf/embl_refs -For EMBL files, you can give the path to a directory with several EMBL files. + For EMBL files, you can give the path to a directory with several EMBL files. -**Note:** The reference database can be built in another DMS. + **Note:** The reference database can be built in another DMS. 3. Download the taxonomy: wget https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz - Check the md5, as files downloaded from the NCBI are often corrupted on some networks. Compare https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz.md5 with: + Check the md5 sum, as files downloaded from the NCBI are often corrupted on some networks. Compare https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz.md5 with: md5sum taxdump.tar.gz