diff --git a/Release-notes.md b/Release-notes.md index 7bdf7f5..836f919 100644 --- a/Release-notes.md +++ b/Release-notes.md @@ -21,6 +21,12 @@ ### Enhancement +- Some sequences in the Genbank and EMBL databases are several gigabases long. The + sequence parser had to reallocate and recopy memory many times to read them, + resulting in a complexity of O(N^2) for reading such large sequences. + The new file chunk reader has a linear algorithm that speeds up the reading + of very long sequences. + - A new option **--csv** is added to every obitools to indicate that the input format is CSV diff --git a/pkg/obioptions/version.go b/pkg/obioptions/version.go index bde6c12..6107b75 100644 --- a/pkg/obioptions/version.go +++ b/pkg/obioptions/version.go @@ -8,7 +8,7 @@ import ( // corresponds to the last commit, and not the one when the file will be // commited -var _Commit = "937a483" +var _Commit = "3a1cf4f" var _Version = "Release 4.4.0" // Version returns the version of the obitools package.