diff --git a/Release-notes.md b/Release-notes.md index dbbc690..fb837fb 100644 --- a/Release-notes.md +++ b/Release-notes.md @@ -20,7 +20,7 @@ Its development is still in progress. - Correction of a bug when using paired sequence file with the **--out** option. -- Correction of a bug in `obitag` when trying to annotate very short sequence of +- Correction of a bug in `obitag` when trying to annotate very short sequences of 4 bases or less. diff --git a/pkg/obitools/obiconvert/options.go b/pkg/obitools/obiconvert/options.go index 832f6b9..f3a9cea 100644 --- a/pkg/obitools/obiconvert/options.go +++ b/pkg/obitools/obiconvert/options.go @@ -31,7 +31,6 @@ var __output_fastjson_format__ = false var __output_fastobi_format__ = false var __no_progress_bar__ = false -var __compressed__ = false var __skip_empty__ = false var __output_file_name__ = "-" diff --git a/pkg/obitools/obitag/obitag.go b/pkg/obitools/obitag/obitag.go index ccb4888..7100ba0 100644 --- a/pkg/obitools/obitag/obitag.go +++ b/pkg/obitools/obitag/obitag.go @@ -260,7 +260,7 @@ func CLIAssignTaxonomy(iterator obiiter.IBioSequence, if taxon != nil { j++ } else { - log.Warnf("Taxid %d is not described in the taxonomy %s."+ + log.Warnf("Taxid %s is not described in the taxonomy %s."+ " Sequence %s is discared from the reference database", seq.Taxid(), taxo.Name(), seq.Id()) }