diff --git a/pkg/obitools/obiuniq/options.go b/pkg/obitools/obiuniq/options.go index 2b64718..e97db9a 100644 --- a/pkg/obitools/obiuniq/options.go +++ b/pkg/obitools/obiuniq/options.go @@ -7,7 +7,7 @@ import ( var _StatsOn = make([]string, 0, 10) var _Keys = make([]string, 0, 10) -var _OnDisk = false +var _InMemory = false var _chunks = 100 var _NAValue = "NA" var _NoSingleton = false @@ -32,8 +32,8 @@ func UniqueOptionSet(options *getoptions.GetOpt) { options.BoolVar(&_NoSingleton, "no-singleton", _NoSingleton, options.Description("If set, sequences occurring a single time in the data set are discarded.")) - options.BoolVar(&_OnDisk, "on-disk", _OnDisk, - options.Description("Allows for using a disk cache during the dereplication process. ")) + options.BoolVar(&_InMemory, "in-memory", _InMemory, + options.Description("Use memory instead of disk to store data chunks.")) options.IntVar(&_chunks, "chunk-count", _chunks, options.Description("In how many chunk the dataset is pre-devided for speeding up the process.")) @@ -56,7 +56,7 @@ func CLIKeys() []string { } func CLIUniqueInMemory() bool { - return !_OnDisk + return _InMemory } func CLINumberOfChunks() int {