diff --git a/.gitignore b/.gitignore
index be29ba6..7bb6d34 100644
--- a/.gitignore
+++ b/.gitignore
@@ -2,4 +2,6 @@ cpu.pprof
 cpu.trace
 obicount
 obipairing
-bin
\ No newline at end of file
+bin
+*.fastq
+*.fasta
\ No newline at end of file