project:
  type: book
  output-dir: ../build/_book

engine: jupyter

book:
  title: "OBITools V4"
  author: "Eric Coissac"
  date: "1/17/2023"
  page-navigation: true
  chapters:
    - index.qmd
    - part: intro.qmd
      chapters:
        - installation.qmd
        - formats.qmd
        - tutorial.qmd
    - part: commands.qmd
      chapters:
        - inupt.qmd
        - output.qmd
        - common_options.qmd
        - expressions.qmd
        - comm_metabarcode_design.qmd
        - comm_reformat.qmd
        - comm_annotation.qmd
        - comm_computation.qmd
        - comm_sampling.qmd
        - comm_utilities.qmd
    - part: library.qmd
  appendices:
    - annexes.qmd
    - references.qmd

bibliography: ../lib/book.bib

execute: 
  freeze: auto

format:
  html:
    theme: zephyr
    html-math-method: mathml
  pdf:
    documentclass: scrreprt
    keep-tex: true
  epub: 
    html-math-method: mathml
    code-overflow: scroll
    css: epub.css