35 lines
618 B
C
35 lines
618 B
C
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/*
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* sumaclust.h
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*
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* Created on: april 2, 2012
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* Author: mercier
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*/
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#ifndef SUMACLUST_H_
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#define SUMACLUST_H_
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typedef struct {
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int32_t next;
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int32_t threads_number;
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int* potential_nexts_list;
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fastaSeqPtr* db;
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int n;
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int normalize;
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int reference;
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BOOL lcsmode;
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BOOL fast;
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double threshold;
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BOOL stop;
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int sizeForSeqs;
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int16_t** addresses;
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int16_t** iseqs1;
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int16_t** iseqs2;
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int seeds_counter;
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double worstscore;
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double max_ratio;
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int64_t elapsedtime;
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} thread_control_t;
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#endif /* SUMACLUST_H_ */
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