sumaclust version 1.0.02

Makefile

@@ -0,0 +1,52 @@
+EXEC=sumaclust
+
+SUMACLUST_SRC= sumaclust.c \
+               mtcompare_sumaclust.c
+
+             
+SUMACLUST_OBJ= $(patsubst %.c,%.o,$(SUMACLUST_SRC))
+
+
+SRCS= $(SUMACLUST_SRC)
+
+LIB= -lfasta -llcs -lfile -lutils -lm #-ll
+
+
+include ./global.mk
+
+all: $(EXEC)
+
+
+########
+#
+# sumaclust compilation
+#
+########
+
+# executable compilation and link
+
+ifeq ($(CC),gcc)
+        LFLAGS = -fopenmp 
+else
+        LFLAGS = 
+endif
+
+sumaclust: $(SUMACLUST_OBJ) $(LIBFASTA) $(LIBLCS) $(LIBFILE) $(LIBUTILS)
+	$(CC) $(LDFLAGS) -o $@ $(LFLAGS) $(SUMACLUST_OBJ) $(LIB) $(LIBFASTAPATH) $(LIBLCSPATH) $(LIBFILEPATH) $(LIBUTILSPATH)
+	
+########
+#
+# project management
+#
+########
+
+clean:
+	rm -f *.o	
+	rm -f *.P
+	rm -f $(EXEC)
+	$(MAKE) -C ./sumalibs/libfasta clean
+	$(MAKE) -C ./sumalibs/liblcs clean
+	$(MAKE) -C ./sumalibs/libfile clean
+	$(MAKE) -C ./sumalibs/libutils clean
+
+