sumaclust version 1.0.02

sumaclust.h

@@ -0,0 +1,34 @@
+/*
+ * sumaclust.h
+ *
+ *  Created on: april 2, 2012
+ *      Author: mercier
+ */
+
+
+#ifndef SUMACLUST_H_
+#define SUMACLUST_H_
+
+typedef struct {
+    int32_t			next;
+    int32_t			threads_number;
+    int*			potential_nexts_list;
+	fastaSeqPtr*    db;
+	int				n;
+	int             normalize;
+	int 			reference;
+	BOOL			lcsmode;
+	BOOL			fast;
+	double			threshold;
+    BOOL 			stop;
+    int				sizeForSeqs;
+    int16_t**		addresses;
+    int16_t**		iseqs1;
+    int16_t**		iseqs2;
+    int				seeds_counter;
+    double			worstscore;
+    double			max_ratio;
+    int64_t 		elapsedtime;
+} thread_control_t;
+
+#endif /* SUMACLUST_H_ */