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This commit is contained in:
Eric Coissac
2025-11-16 14:56:03 +01:00
parent 35d275c104
commit 30b7175702
367 changed files with 170866 additions and 11173 deletions
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jupyterhub_volumes/web/obidoc/obitools/obipairing/paired_alignment.fastq Normal file
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@M01334:147:000000000-LBRVD:1:1101:15946:1586 {"ali_dir":"right","ali_length":138,"definition":"1:N:0:CTCACCAA+CTAGGCAA","mode":"alignment","pairing_mismatches":{"(T:16)->(A:33)":14,"(T:33)->(A:17)":118,"(T:37)->(A:16)":125,"(T:38)->(A:16)":32,"(T:39)->(A:17)":44},"paring_fast_count":114,"paring_fast_overlap":138,"paring_fast_score":0.844,"score":5446,"score_norm":0.957,"seq_a_single":13,"seq_ab_match":132,"seq_b_single":13}
gctcatccgaactacctaaccccattgagtctctgcacctatctttaatattagataagaaatattttatttcttataataaataagagatattttatatctctcattttttcaaaatgaaagatttggctcaggattgcccacgtaacggagatcggaagagc
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111/////2B112CMMOUO?MNObVHfcAVVHVWVVTQSWRXXIYYYXUSWiXaWeWWUWVSTTTWXgeUWWXXXWWgXWYYWVYWdUgSTTTXYYUVdTVWVXVgUWXXXVeYXfTCUXWW`QGUWfA@WSR?PRRWVARAc?UVMMOO?///BF////<000
@M01334:147:000000000-LBRVD:1:1101:13773:1687 {"ali_dir":"left","ali_length":54,"definition":"1:N:0:CTCACCAA+CTAGGCAA","mode":"alignment","pairing_mismatches":{"(C:39)->(A:16)":102,"(C:39)->(A:17)":121,"(T:39)->(A:14)":101},"paring_fast_count":42,"paring_fast_overlap":54,"paring_fast_score":0.824,"score":2888,"score_norm":0.944,"seq_a_single":97,"seq_ab_match":51,"seq_b_single":97}
ctcggatcaccattgagtctctgcacctatctttaatattagataagaaaaaatattatttcttatctgaaataagaaatattttatatatttctttttctcaaaatgaaagatttggctcaggattgccctgatccgagggatagcaccattgagtctctgcacctatccttttcttttgtattctagttcgagaacccccttgttttctcaaaacacggatttggctcaggatagccctgctatca
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3AAAAAADFFFFGGGGFGGGGGHHHHHHFHHHHHHHHGHHHHGHGGHFFHHHCGFHHHHHHHHHHHHHGHHGGFHFFHHHGHHHHBHHHGHHHHHHHXVVJIommmegikl]bVWgVDRXIlbkkVfPSWVWccVVT^ebggjkkCVeWcd1@CF>0/11@11B011F0/0000/00111@@D1111GA01AFGCEEE///0//BAFD0000HGGFAB011B00CBAB11FA1B11>1111@31>111