http://metabar:8888/obidoc/docs/commands/ Recent content in The OBITools4 commands on OBITools4 documentation Hugo en-us Fri, 04 Oct 2024 17:16:03 +0200 http://metabar:8888/obidoc/docs/commands/tags/ Fri, 04 Oct 2024 17:16:03 +0200 http://metabar:8888/obidoc/docs/commands/tags/ <h1 id="glossary-of-tags"> Glossary of tags <a class="anchor" href="#glossary-of-tags">#</a> </h1> <h3 id="--d--"> - D - <a class="anchor" href="#--d--">#</a> </h3> <ul> <li> <p><strong>definition</strong> :</p> <blockquote> <p>text information about the sequence present in the original sequence file.</p> </blockquote> </li> <li> <p><strong>direction</strong> :</p> <blockquote> <p>set to “forward” if the original sequence did not need to be reverse-complemented to be processed, set to “reverse” otherwise. ( <a href="http://metabar:8888/obidoc/obitools/obipcr/">obipcr</a>)</p> </blockquote> </li> </ul> <h3 id="--f--"> - F - <a class="anchor" href="#--f--">#</a> </h3> <ul> <li> <p><strong>forward_error</strong> :</p> <blockquote> <p>Number of mismatch between forward primer and priming site ( <a href="http://metabar:8888/obidoc/obitools/obipcr/">obipcr</a>)</p> </blockquote> </li> <li> <p><strong>forward_match</strong> :</p> <blockquote> <p>Forward primer priming site sequence ( <a href="http://metabar:8888/obidoc/obitools/obipcr/">obipcr</a>)</p> </blockquote> </li> <li> <p><strong>forward_primer</strong> :</p> <blockquote> <p>Forward primer sequence ( <a href="http://metabar:8888/obidoc/obitools/obipcr/">obipcr</a>)</p>