diff --git a/src/obikmer/Cargo.toml b/src/obikmer/Cargo.toml index 34b4c9e3..8c844f4f 100644 --- a/src/obikmer/Cargo.toml +++ b/src/obikmer/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "obikmer" -version = "1.2.0" +version = "1.2.1" edition = "2024" [[bin]] diff --git a/src/obikphylo/Cargo.toml b/src/obikphylo/Cargo.toml index 282a852f..ab043056 100644 --- a/src/obikphylo/Cargo.toml +++ b/src/obikphylo/Cargo.toml @@ -4,7 +4,7 @@ version = "0.1.0" edition = "2024" [dependencies] -obikindex = { path = "../obikindex" } +obikindex = { path = "../obikindex", default-features = false } obikseq = { path = "../obikseq" } obikpartitionner = { path = "../obikpartitionner" } obiskio = { path = "../obiskio" } diff --git a/src/obikphylo/src/siblings/tests.rs b/src/obikphylo/src/siblings/tests.rs index b21b21c2..e12cc1ce 100644 --- a/src/obikphylo/src/siblings/tests.rs +++ b/src/obikphylo/src/siblings/tests.rs @@ -1108,9 +1108,8 @@ fn diag_real_index_verify_kmer_resolution() { // The k-mer with A+other (mask 0b0011 = A+C) let kmer_str = "AGCTAGCTATTGAGCCTGGTCCGTATGAAAC"; - let kmer = CanonicalKmer::from_str(kmer_str, k).unwrap(); - let rc = kmer.revcomp(); - let rc_str = kmer_to_string(&rc, k); + let kmer = canonical(kmer_str.as_bytes()); + let rc_str = kmer_revcomp_to_string(&kmer, k); println!("kmer_forward={} kmer_revcomp={}", kmer_str, rc_str); println!("kmer partition={}", kmer.partition(n_parts));