Files
annotate/data/rrna/RRNA_16S/00003_RRNA16S_NC_025546_337.align.fasta

85 lines
5.2 KiB
Plaintext
Raw Normal View History

>RRNA16S_NC_023835_375 count=1; cluster_weight=3; cluster=RRNA16S_NC_025546_337; cluster_score=0.900191; cluster_center=False;
--------AGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
AGTCGTACGAATGCAATGAGGCTTGCTTCATTG-----------TAATGAGTGGCGGACG
GGTGAGTAACACGTAAGAACCTACCTTTTGGAGAGGGACAACCATTGGAAACGATGGCTA
ATACCTCGT--ATTGCTGAGAAGTG-AAAGATG-AAAATCGCCAAGAGATGGGCTTGCGG
CTGATTAGCTTGTTGGTGAGGTAATGGCTTACCAAGGCAATGATCAGTAGCTGGTCTGAG
AGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG
AGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGATGAAGGCC
TATGGGTTGTAAACTTCTTTTCTCAGAGAAG-AATTTTGACGGTATCTGAGGAATAAGCA
TCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATG
ATTGGGCGTAAAGCGTCTGTAGGTGGCTTCAAAAGTCTCCTGTCAAAGATCAGGGCTTAA
CCCTGGGCCGGCAGGAGAAACTCTGAGGCTAGAGTTTGGTAGGGGCAGAGGGAATTCCCG
GTGGAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAAAGGCGAAAGCACTCTGCTGG
GCC---------------------------------------------------------
-----ATAACTGACACTGAGAGACGAAAGCGAGGGGAGCAAAAGGGATTAGATACCCCTG
TAGTCCTCGCCGTAAACGATGGATACTAGATGTTGGATAGGTT-AAAGCATTCAGTATCG
GAGCTAACGCGTGAAGTATCCCGCCTGGGGAGTATGCTCGCAAGAGTGAAACTCAAAGGA
ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA
CCTTACCAGGACTTGACATGCCACTTTTTCCCTGAAAGGGGAAGTTC-------------
---------------------CAGAGTGGACACAGGTGGTGCATGGCTGTCGTCAGCTCG
TGTCTTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTTTGAATTGCCAGT
TATGGGAAATTCAAAAGACTGCCGGTGACAAGCCGGAGGAAGGTGAGGATGACGTCAAGT
CAGCATGCCCCTTACGTCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGAGATGC
AAACCCGCGAGGGCTAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCAGGCTGCAA
CTCGCCTGCATGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCCATACTGCGGTGAATAC
GTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGCTGGCTATGCCCAAAGTCG
TTACTCCAACC--CTTGTGGAGGGGGACGCCTAAGGCAGGGCTAGTGACTGGGGTGAAGT
CGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGAACACCT-----
>RRNA16S_NC_025546_337 count=1; cluster_weight=3; cluster=RRNA16S_NC_025546_337; cluster_score=1.000000; cluster_center=True;
TTTCACGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
AGTCGAACG-----AAGCATTTTTTGTTCCTTGGGATAAAAAATGACTGAGTGGCGGACG
GGTGAGTAACACGTAAGAACCTACCTTTTGGAGAGGGACAACCACTGGAAACGGTGGCTA
AAACCTCATAAAAAGCTGAGAAGTGAAAAGATGAAAAATCGCCAAAAGATGGGCTTGCGG
CTGATTAGCTTGTTGGTGAGGTAAAGGCTTACCAAGGCAATGATCAGTAGCTGGTCTGAG
AGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG
AGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGATGAAGGCC
TGTGGGTTGTAAACTTCTTTTCTCAGAGAAGAAAAATTGACGGTATCTGAGGAATAAGCA
TCGGCTAACTATGTGCCAGCAGCCGCGGTAAGACATAGGATGCAAGCGTTATCCGGAATG
ATTGGGCGTAAAGCGTCTGTAGGTGGTTTGACAAGTCTCCTGTCAAAGATCAGGGCTTAA
CCCTGGGCCGGCAGGAGAAACTATCAGGCTAGAGTTCGGTAGGGGCAGAGGGAATTCCCG
GTGGAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAAAGGCGAAAGCACTCTGCTGG
GCCGATTTTTTTTCAACTT------------------------------------GTTGA
AAAAAAGTACTGACACTGAGAGACGAAAGCGAGGGGAGCAAATGGGATTAGATACCCCAG
TAGTCCTCGCCGTAAACGATGGATACTTGGTGTTGGGTGGATTAAAAACATTCAGTACCG
TAGCTCACGCGTGAAGTATCCCGCCTGGGGAGTATGCTCGCAAGAGTGAAACTCAAAGGA
ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA
CCTTACCAGGGCTTGACATGCTACTTTTTTCCTGAAAGGGAAATTTCCTTTTTTCTTTTT
AATTCGTTTTAAAGAAAAAAGCGGGGTAGACACAGGTGGTGCATGGCTGTCGTCAGCTCG
TGTCTTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTTTGAGTTGCTAAT
TTAAGGAAACTCAAAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGT
CAGCATGCCCCTTACGTCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGAGATGC
AAGCCCGCGAGGGGTAGCTAATCTCAAAAACCCGGTCTCAGTTCGGATTGCAGGCTGCAA
CTCGCCTGCATGAAGTCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATAC
GTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGCTGGCTATGCCCAAAGTCG
TTACCCCAACCACTTTGTGGAGGGGGATGCCTAAGGCGGGGCTAGTGACTGGGGTGAAGT
CGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTA
>RRNA16S_NC_012978_338 count=1; cluster_weight=3; cluster=RRNA16S_NC_025546_337; cluster_score=0.938004; cluster_center=False;
TTTCACGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
AGTCGAACG-----AATGGTTTCTTCTACTT--GTAGAAGAAATTAATGAGTGGCGGACG
GGTGAGTAACACGTAAGAACCTGCCTTTTGGAGAGGGACAACCACTGGAAACGGTGGCTA
AAACCTCAT---AAGCTGAGAAGTGAAAAGATGAAAAATCGCCAAGAGATGGGCTTGCGG
CTGATTAGCTAGTTGGTGAGGTAATGGCTTACCAAGGCAATGATCAGTAGCTGGTCTGAG
AGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTG
AGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGAAGGATGAAGGCC
TGTGGGTTGTAAACTTCTTTTCTCAGAGAAGAAAAATTGACGGTATCTGAGGAATAAGCA
TCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCGGAATG
ATTGGGCGTAAAGCGTCTGTAGGTGGTTTGACAAGTCTCCTGTCAAAGATCAGGGCTTAA
CCCTGGGCCGGCAGGAGAAACTATCAGGCTAGAGTTCGGTAGGGGCAGAGGGAATTCCCG
GTGGAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAAAGGCGAAAGCACTCTGCTGG
GCCGATTTTTTTTGTTTTTTTTTGTTTTTTGAATCCGTTCAAAAAACAAAAAAGAGTTCA
AAAAAAGTACTGACACTGAGAGACGAAAGCGAGGGGAGCAAATGGGATTAGATACCCCAG
TAGTCCTCGCCGTAAACGATGGATACTAGGTGTTGGGTGGTTTAAAAACATTCAGTACCG
TAGCTCACGCGTGAAGTATCCCGCCTGGGGAGTATGCTCGCAAGAGTGAAACTCAAAGGA
ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA
CCTTACCAGGGCTTGACATGCCACTTTTTTCCTGAAAGGGAAAGTTC---TCACTTTTTT
AG---GTTTCCTAAAAAAGTGAAGGGTGGACACAGGTGGTGCATGGCTGTCGTCAGCTCG
TGTCTTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTTTGAGTTGCCATT
TTTGGGAAACTCAAAAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGACGTCAAGT
CAGCATGCCCCTTACGTCCTGGGCGACACACGTGCTACAATGGCCGGGACAAAGAGATGC
AATCCCGCGAGGGTTAGCCAACCTCAAAAACCCGGTCTCAGTTCGGATTGCAGGCTGCAA
CTCGCCTGCATGAAGTCGGAATCGCTAGTAATCGCCGGTCAGCCATACGGCGGTGAATAC
GTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGCTGGCTATGCCCAAAGTCG
TTACCCCAACCAACTACTGGAGGGGGATGCCTAAGGCAGGGCTAGTGACTGGGGTGAAGT
CGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATCACCTCCTTA