PhyloSkims/annotate
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

First version including the rRNA detector

Browse Source 
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77
Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
This commit is contained in:
Eric Coissac
2015-10-12 07:15:08 -03:00
parent bff0beaeee
commit 01c5880ace
530 changed files with 140563 additions and 19944 deletions
Download Patch File Download Diff File Expand all files Collapse all files

BIN
data/rrna/RRNA_23S/.DS_Store vendored Normal file
View File

Binary file not shown.

3
data/rrna/RRNA_23S/00001_RRNA23S_NC_001865_170.align.fasta Normal file
View File

@@ -0,0 +1,3 @@
>RRNA23S_NC_001865_170 count=1; cluster_weight=1; cluster=RRNA23S_NC_001865_170; cluster_score=1.000000; cluster_center=True;
TCACTACCTTGTATTCTTGCTTGCATGGAACCACCTTATCCATCTCGAACTAAGAAGTGA
AACGTGTAAGGGGCGACAATACTTGAGGGGAGGCCCTCTGGAAAGATAGCCTAATGCA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_001865_170.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_001865_170 count=1; cluster_weight=1; cluster=RRNA23S_NC_001865_170; cluster_score=1.000000; cluster_center=True;
tcactaccttgtattcttgcttgcatggaaccaccttatccatctcgaactaagaagtgaaacgtgtaaggggcgacaatacttgaggggaggccctctggaaagatagcctaatgca

10
data/rrna/RRNA_23S/00001_RRNA23S_NC_004115_516.align.fasta Normal file
View File

@@ -0,0 +1,10 @@
>RRNA23S_NC_004115_516 count=1; cluster_weight=1; cluster=RRNA23S_NC_004115_516; cluster_score=1.000000; cluster_center=True;
AGATGCTTTTTTTTATTTTATGATATTATTCTAATAATAAAAATAGAATTGTAATTAAAG
TTCAAGTCTTGACAAATCTTTTAAAGACTTTTATAATTGCCTGATGGGGGGGAAAAAGAA
AGGGGGGGGTACAAGTTAAAGTAATATCTTAGTACATATCACTAATAAAGAATAAATCAA
TTGTCTTATCTCCGAATAAAGAAACATATCTGTTAGTACAATTTCTTATCTCTTAATACA
TATCTCTGTAACCTTTAGCTTGTAATATATGTCTTATCTCCGAATAAAGAAATTGTCTTA
TCTCCGAAACATATATACATATCTCTTAATACATATGTCTTATCTCCTAATACATATAAC
TAATAAAGAATAAAGCAATTGTCTTACTTCCGAAACATATTACTAGTAAAGAAACAAATC
TGTTAGTACAAGTACATATTTCTTATCTCTTAATACATATCTTTGTAACCTTTAGCTTGT
AAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_004115_516.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_004115_516 count=1; cluster_weight=1; cluster=RRNA23S_NC_004115_516; cluster_score=1.000000; cluster_center=True;
agatgcttttttttattttatgatattattctaataataaaaatagaattgtaattaaagttcaagtcttgacaaatcttttaaagacttttataattgcctgatgggggggaaaaagaaaggggggggtacaagttaaagtaatatcttagtacatatcactaataaagaataaatcaattgtcttatctccgaataaagaaacatatctgttagtacaatttcttatctcttaatacatatctctgtaacctttagcttgtaatatatgtcttatctccgaataaagaaattgtcttatctccgaaacatatatacatatctcttaatacatatgtcttatctcctaatacatataactaataaagaataaagcaattgtcttacttccgaaacatattactagtaaagaaacaaatctgttagtacaagtacatatttcttatctcttaatacatatctttgtaacctttagcttgtaat

2467
data/rrna/RRNA_23S/00001_RRNA23S_NC_004543_104.align.fasta Normal file
View File

File diff suppressed because it is too large Load Diff

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_004543_104.fasta Normal file
View File

File diff suppressed because one or more lines are too long

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_005353_59.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_005353_59 count=1; cluster_weight=1; cluster=RRNA23S_NC_005353_59; cluster_score=1.000000; cluster_center=True;
ATCCATGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCATGCTTAACACATGCA
AGTCGAACGAGCAAAGCAATTTGTGTAGTGGCGAACGGGTGCGTAACGCGTAAGAACCTA
CCTATCGGAGGGGGATAACATTGGGAAACTGTTGCTAATACCCCATACAGCTGAGGAGTG
AAAGGTGAAAAACCGCCGATAGAGGGGCTTGCGTCTGATTAGCTAGTTGGTGGGGGTAAC
GGCCTCCCAAGGCCACGAGCAGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTG
AGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTTCGCAATGGGCGCAAG
CGACGGAGCAATGCCGCGTGCAGGAAGAAGGCCTGTGGGTCGTAAACTGCTTTTCTCAGA
GAAGAAGTTCTGACGGTATCTGAGGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCG
GTAATACAGAGGGTGCAAGCGTTGTCCGCAATGATTGGGCGTAAAGCGTCTGTAGGTGGC
TCGTAAAGTCTAATGTCAAATACCAGGGCTCAACCTTGGACCGGCATTGGAGTACTCACG
AGCTTGAGTACGGTAGGGGCAGAGGGAATTCCATGTGGAGCGGTGAAATGCGTAGAGATA
TGGAGGAACACCAGTGGCGAAGGCGCTCTGCTGGGCCGAAACTGACACTGAGAGACGAAA
GCTGGGGGAGCGAATAGGATTAGATACCCTAGTAGTCCCAGCCGTAAACTATGGAGACTA
AGTGCTGCCGCAAGCAGTGCTGTAGCTAACGCGTTAAGTCTCCCGCCTGGGGAGTATGCT
CGCAAGAGTGAAACTCAAAGGAATTGACGGGACCGCACAAGCGGTGGATTATGTGGATTA
ATTCGATACAACGCGAAGAACCTTACCAGGGTTTGACATGTCAAGAACCTCTCAGAAATG
GGAGGGTGCCCTAACGGACTTGAACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCTGT
GAAGTGTATAGTTAAGTCTCATAACGAGCGCAACCCTCGTCTTTAGTTGCCATTTGGTTC
TCTAAAGAGACTGCCAGTGTAAGCTGGAGGAAGGTGAGGATGACGTCAAGTCAGCATGCC
CCTTACATCCTGGGCTTCACACGTAATACAATGGTTGGGACAATCAGAAGCGACTCGTGA
GAGCTAGCGGCTCTGTTAAACCCAACCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACA
TGAAGCCGGAATCGCTAGTAATCGCCAGTCAGCTATATGGCGGTGAATACGTTCCCGGGT
CTTGTACACACCGCCCGTCACACCATGGAAGCTGGTTCTGCTCCAAGTCGTTACCCTAAC
CTTCGGGAGGGGGGCGCCTAAAGCAGGGCTAGTGACTAGGGTGAAGTCGTAACAAGGTAG
GGCTACTGGAAGGTGGCCCTGGCTCACCTCCTTC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_005353_59.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_005353_59 count=1; cluster_weight=1; cluster=RRNA23S_NC_005353_59; cluster_score=1.000000; cluster_center=True;
atccatggagagtttgatcctggctcaggacgaacgctggcggcatgcttaacacatgcaagtcgaacgagcaaagcaatttgtgtagtggcgaacgggtgcgtaacgcgtaagaacctacctatcggagggggataacattgggaaactgttgctaataccccatacagctgaggagtgaaaggtgaaaaaccgccgatagaggggcttgcgtctgattagctagttggtgggggtaacggcctcccaaggccacgagcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaatttttcgcaatgggcgcaagcgacggagcaatgccgcgtgcaggaagaaggcctgtgggtcgtaaactgcttttctcagagaagaagttctgacggtatctgaggaataagcaccggctaactctgtgccagcagccgcggtaatacagagggtgcaagcgttgtccgcaatgattgggcgtaaagcgtctgtaggtggctcgtaaagtctaatgtcaaataccagggctcaaccttggaccggcattggagtactcacgagcttgagtacggtaggggcagagggaattccatgtggagcggtgaaatgcgtagagatatggaggaacaccagtggcgaaggcgctctgctgggccgaaactgacactgagagacgaaagctgggggagcgaataggattagataccctagtagtcccagccgtaaactatggagactaagtgctgccgcaagcagtgctgtagctaacgcgttaagtctcccgcctggggagtatgctcgcaagagtgaaactcaaaggaattgacgggaccgcacaagcggtggattatgtggattaattcgatacaacgcgaagaaccttaccagggtttgacatgtcaagaacctctcagaaatgggagggtgccctaacggacttgaacacaggtggtgcatggctgtcgtcagctcgtgctgtgaagtgtatagttaagtctcataacgagcgcaaccctcgtctttagttgccatttggttctctaaagagactgccagtgtaagctggaggaaggtgaggatgacgtcaagtcagcatgccccttacatcctgggcttcacacgtaatacaatggttgggacaatcagaagcgactcgtgagagctagcggctctgttaaacccaacctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgctagtaatcgccagtcagctatatggcggtgaatacgttcccgggtcttgtacacaccgcccgtcacaccatggaagctggttctgctccaagtcgttaccctaaccttcgggaggggggcgcctaaagcagggctagtgactagggtgaagtcgtaacaaggtagggctactggaaggtggccctggctcacctccttc

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_008097_193.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_008097_193 count=1; cluster_weight=1; cluster=RRNA23S_NC_008097_193; cluster_score=1.000000; cluster_center=True;
TGAGCTAATAGCCCATCATTTTGGAAGATTAGGCCCCTTACCTTATTTATTCGTTCTGAA
TTATGATTTTGAGAATTGATTCTTAATTCTGAATTTCAGTAGGATATAAGGGCCTAAATC
AGTTCTGTATGATCTAGAAAAAACTGCAAATTTGTAGCAGTAACTCATTCTCCCTTAAAA
GGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGTCAC
TAGCCCTGCCTTCGGCATCCCCCTCCTTAAATAATTTAAGGTTAGGGTAACGACTTCGGG
CATGGTCAGCTCCCATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGGATTCACCG
CCGTATGGCTGACCGGCGATTACTAGCGATTCCGCCTTGATGCAGGCGAGTTGCAGCCTG
CAATCCGAACTGAGACCGGGTTTTTGAGGTTAGCTCGCCTTCGCAGGGTTGCAACTCTTT
GTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGATGTAAGGGGCATGCTGACTTGACGTC
ATCCTCACCTTCCTCCGGATTATCACCGGCAGTCTCTCTAGAGTTCCATAATGGCAACTA
GAAACGAGGGTTGCGCTCGTTGCGGGACTTAACCCAACATCTCACGACACGAGCTGACGA
CAGCCATGCACCACCTGTATCCGTGTTCCCGAAGGCACTCCCTCTTTTCAGAGGGACTCA
CAGTATGTCAAACCCTGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCAC
CGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCACTCTTGCGAGCGTACTCCCCAGG
CGGGACACTTAACGCGTTAGCTCCAGCACTGAACGGATCAAATCGTCCAGCACTTAGTGT
CCATCGTTTACAGCTAGGACTACTGGGGTATCTAATCCCATTCGCTCCCCTAGCTTTCGT
CTCTCAGTGTCAGTATCGGCCCAGCAGAGTGCTTTCGCCTTGGGCGTTCTTTCCGATATC
TACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCTCTACCGGACTCCAGCTTAGTAG
TTTCTGCTGCCTGTCTAGGGTTAAGCCCTAGTTTTTAACAGCAGACTGAAAAAGCCACCT
ACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCT
GCTGGCACAGAGTTAGCCGATGCTTATTCTTCAGATACCGTCATGATTTCGTCTCTGAAA
AAAGGAGTTTACGACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTC
GCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTC
CCAGTGTGGCTGATCATCCTCTCAGATCAGCTACTGATCGTTGCCTTGGTAAGCGATTAC
CTCACCAACTAGCTAATCAGACGCAAGTCTCTCCTAGGGCGGATTCCTCCTTTTACTCCT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008097_193.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008097_193 count=1; cluster_weight=1; cluster=RRNA23S_NC_008097_193; cluster_score=1.000000; cluster_center=True;
tgagctaatagcccatcattttggaagattaggccccttaccttatttattcgttctgaattatgattttgagaattgattcttaattctgaatttcagtaggatataagggcctaaatcagttctgtatgatctagaaaaaactgcaaatttgtagcagtaactcattctcccttaaaaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactccagtcactagccctgccttcggcatccccctccttaaataatttaaggttagggtaacgacttcgggcatggtcagctcccatagtgtgacgggcggtgtgtacaaggcccgggaacggattcaccgccgtatggctgaccggcgattactagcgattccgccttgatgcaggcgagttgcagcctgcaatccgaactgagaccgggtttttgaggttagctcgccttcgcagggttgcaactctttgtcccggccattgtagcacgtgtgtcgcccaggatgtaaggggcatgctgacttgacgtcatcctcaccttcctccggattatcaccggcagtctctctagagttccataatggcaactagaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacgagctgacgacagccatgcaccacctgtatccgtgttcccgaaggcactccctcttttcagagggactcacagtatgtcaaaccctggtaaggttcttcgcgttgcatcgaattaaaccacatgctccaccgcttgtgcgggcccccgtcaattcctttgagtttcactcttgcgagcgtactccccaggcgggacacttaacgcgttagctccagcactgaacggatcaaatcgtccagcacttagtgtccatcgtttacagctaggactactggggtatctaatcccattcgctcccctagctttcgtctctcagtgtcagtatcggcccagcagagtgctttcgccttgggcgttctttccgatatctacgcatttcaccgctccaccggaaattccctctgcctctaccggactccagcttagtagtttctgctgcctgtctagggttaagccctagtttttaacagcagactgaaaaagccacctacagacgctttacgcccaatcattccggataacgcttgcatcctctgtcttaccgcggctgctggcacagagttagccgatgcttattcttcagataccgtcatgatttcgtctctgaaaaaaggagtttacgacccgtaggccttctacctccacgcggcattgctccgtcaggctttcgcccattgcggaaaattccccactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcatcctctcagatcagctactgatcgttgccttggtaagcgattacctcaccaactagctaatcagacgcaagtctctcctagggcggattcctccttttactcct

27
data/rrna/RRNA_23S/00001_RRNA23S_NC_008099_489.align.fasta Normal file
View File

@@ -0,0 +1,27 @@
>RRNA23S_NC_008099_489 count=1; cluster_weight=1; cluster=RRNA23S_NC_008099_489; cluster_score=1.000000; cluster_center=True;
AAAGGAGGTATTCCAATCCACACCTTCCAGTACGGATACCTTGTTACGACTTCACCATAG
TTACTAGTTACACCGTAGGCGCTTTCTTCCAAAAGGTTAGATCCACGACTTCGGGCGGAA
CCAACTTCCATGGTGTGACGGGCGGTGTGTACAAGGCTCGGGAACGTATTCACCGCTGTA
TTGCTGACCAGCGATTACTAGCAATTCCGGCTTCATACAGGCGAGTTGCAGCCTGCAATC
CGAACTAAGACTGGGTTTTTGAGGTTGGCTTCTTCTCGCGAAGTTGCATCCCATTGTCCC
AGCCATTGTAGCACGTGTGTAGCCCAAGATGTAAGGGGCATGCTGATTTGACGTCATCCT
CACCGTCCTCCGGCTTATCACCGGCAGTCTCGCTAGTTTCCCAAATGGCAACTAGTCGAT
AAGGGTTGCGCTCGTTGCAGGACTTAACCTAACACCTCACGGCACGAGCTGACGACAACC
ATGCACCACCTGTGTTCACGTTGCTTAATGCCGGACTCAGTCCAGCAGCAAAAGAGTCAC
TTTCGCGACTCGGCGTGACATGTCAAACCTTGGTAAGGTTCTTCGCGTATCATCGAATTA
AACCACATGCTCCACTGCTTGTGCGAGCCCCCGTCAATTCCTTTGAGTTTCACCCTTGCG
AGCATACTCCCCAGGCGGGATACTTAACGCGTTAGCTACAATACTGAATGTTTTGAATCA
CCCAATACTTAGTATCCATCGTTTACAGCTAGAACTACTATGGTATCTAATCATATTCGC
TACTCTAGCTTTCGTCTCTCAGCGTCAGTTTCGGCCCAGTAGAGTGCTTTCGCCGTTGGT
GTTCCTCCCAATCTCTACACATTTCACCGTTACACTGGGAATTCCCTCTACCTCTACCGT
ACTCAAGTTTTCTAGTTTCCGCTGCCGACCCAGGGTTAAGCCCTAGTCTTTGACACCAGA
CTTGAAAAACCGCCTACAGACTCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCCC
CGTATTACCGCGACTGCTGGCACGGAGTTAGTCGATGCTTATTCCTCAAATAATGTCAGT
ATTCATCCTTGAGAAAAGAAGTTTACAACCCACGGGCCGTCATCCTTCACGCGGTATTGC
TCCGTCAGGCTTTCACCCATTGCGGAAAATTCCTCACTGCTGCCTCCCGTAGGAGTCTGG
GCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTCAGACCAGCTACTGATCGTCGCCT
TGGTAAGCCATTACCTCACCAACTAGCTAATCAGCCGCAAGCCCGTCTTTAGGCCCCTGA
AAGGGTTTCACTCCTCAGCATATGGAGTATTAGCAACCGTTTCCAGTTGTTATCCTCCTC
CTAAAGGTAGGTTCTTACGTGTTACTCACCCGTCCGGCGCTGGCTAGACTGTACAAGTAC
AGTTTCGCTCGCTTGCCTTGCATGTGTTAAGCATACCGCCAGCGTTCATCCTGAGCCAGG
ATCAAACTCTCCATGATAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008099_489.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008099_489 count=1; cluster_weight=1; cluster=RRNA23S_NC_008099_489; cluster_score=1.000000; cluster_center=True;
aaaggaggtattccaatccacaccttccagtacggataccttgttacgacttcaccatagttactagttacaccgtaggcgctttcttccaaaaggttagatccacgacttcgggcggaaccaacttccatggtgtgacgggcggtgtgtacaaggctcgggaacgtattcaccgctgtattgctgaccagcgattactagcaattccggcttcatacaggcgagttgcagcctgcaatccgaactaagactgggtttttgaggttggcttcttctcgcgaagttgcatcccattgtcccagccattgtagcacgtgtgtagcccaagatgtaaggggcatgctgatttgacgtcatcctcaccgtcctccggcttatcaccggcagtctcgctagtttcccaaatggcaactagtcgataagggttgcgctcgttgcaggacttaacctaacacctcacggcacgagctgacgacaaccatgcaccacctgtgttcacgttgcttaatgccggactcagtccagcagcaaaagagtcactttcgcgactcggcgtgacatgtcaaaccttggtaaggttcttcgcgtatcatcgaattaaaccacatgctccactgcttgtgcgagcccccgtcaattcctttgagtttcacccttgcgagcatactccccaggcgggatacttaacgcgttagctacaatactgaatgttttgaatcacccaatacttagtatccatcgtttacagctagaactactatggtatctaatcatattcgctactctagctttcgtctctcagcgtcagtttcggcccagtagagtgctttcgccgttggtgttcctcccaatctctacacatttcaccgttacactgggaattccctctacctctaccgtactcaagttttctagtttccgctgccgacccagggttaagccctagtctttgacaccagacttgaaaaaccgcctacagactctttacgcccaatcattccggataacgcttgcatcccccgtattaccgcgactgctggcacggagttagtcgatgcttattcctcaaataatgtcagtattcatccttgagaaaagaagtttacaacccacgggccgtcatccttcacgcggtattgctccgtcaggctttcacccattgcggaaaattcctcactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcgtcctctcagaccagctactgatcgtcgccttggtaagccattacctcaccaactagctaatcagccgcaagcccgtctttaggcccctgaaagggtttcactcctcagcatatggagtattagcaaccgtttccagttgttatcctcctcctaaaggtaggttcttacgtgttactcacccgtccggcgctggctagactgtacaagtacagtttcgctcgcttgccttgcatgtgttaagcataccgccagcgttcatcctgagccaggatcaaactctccatgatat

3
data/rrna/RRNA_23S/00001_RRNA23S_NC_008100_504.align.fasta Normal file
View File

@@ -0,0 +1,3 @@
>RRNA23S_NC_008100_504 count=1; cluster_weight=1; cluster=RRNA23S_NC_008100_504; cluster_score=1.000000; cluster_center=True;
AATAAAATTAGTGTCTTAATAATATAGAAAGACCTTAAATCCATACCGAACTAAGAAGTG
ATACTATATTAAAACAAAAATACTAAGTGGGCAGCTGCTTGGAAAGATAGTTAGATGCT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008100_504.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008100_504 count=1; cluster_weight=1; cluster=RRNA23S_NC_008100_504; cluster_score=1.000000; cluster_center=True;
aataaaattagtgtcttaataatatagaaagaccttaaatccataccgaactaagaagtgatactatattaaaacaaaaatactaagtgggcagctgcttggaaagatagttagatgct

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_008101_71.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_008101_71 count=1; cluster_weight=1; cluster=RRNA23S_NC_008101_71; cluster_score=1.000000; cluster_center=True;
CACCCTGGCACTAAGTTGATTTTTCCTGCTAGACTTCCAACAAGTTTGTCAACTTCTTTA
GCGTTTCACAGCCAAGTTCGGGATGGATTGGCGTGGTTCCACAAAAGCATAGAGCACCAG
AGTAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008101_71.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008101_71 count=1; cluster_weight=1; cluster=RRNA23S_NC_008101_71; cluster_score=1.000000; cluster_center=True;
caccctggcactaagttgatttttcctgctagacttccaacaagtttgtcaacttctttagcgtttcacagccaagttcgggatggattggcgtggttccacaaaagcatagagcaccagagtat

27
data/rrna/RRNA_23S/00001_RRNA23S_NC_008114_126.align.fasta Normal file
View File

@@ -0,0 +1,27 @@
>RRNA23S_NC_008114_126 count=1; cluster_weight=1; cluster=RRNA23S_NC_008114_126; cluster_score=1.000000; cluster_center=True;
GTTTGTCTAGCCATATCCGACATTATTATACCTAAAAAAAAACGTAAATCAAAGTTTTTT
AATAGAAAAACGTTTTATAGAAGCCAAAAAATTCCATTTTTTCCTTAATAATTTTGATTT
CGTTTTTGAACTTCTTATAATTTTTTATTTTGTAAAGTTTCCGCTAAAAATTTCTTTTTA
AAATTCATAAAAACTTAGCTATAAGTTTCACAGATATTTTTTTTCTTAGTTTAAAATCCA
TTAAAAAATTACGATATAATCTAAAATTGACAACTTCAACGCGCTGCTTTTACCGTGTCT
TCCCTTTTGAGCAGCTTTGAAGTTTTGCTCCTTGCTTCGCTACTACTCAAAGGGGAATTC
TTTTGGAACAAATAAAGCCGAATACAGCAAGGGATAGCAAAAAAAACTGCGGTTTTGAAT
TGAATAAAGAAGGAATTAACTTTCGGTATTCAAATCTTTTGTTATAGCTTTTTCTAAATT
TAATTTTTTTGACGCTCTACTTGCTATAAAATAGGCTTGGATTGCTTGTTTTAAGGCTTT
TTTTTTCCAAACTGTTTTTCTTAAATTTGTTTTTGATTTAGATGTTCGTTTTTTTGGAAC
TGCCATTTTCTTTCTCCTTTGTTAAGAACACTTTTTAGACTTATTTTTCATCTTTTTCAT
TTTAAAATGAAAGTCGGGCATTCTTTGTGATAGTATTTATATAATAAAAAGAGTGGTTCA
ACAATAAAAATGAACCAACTTTTTTATATGAAAAACAATGTTTTCAAATTTGATGGTAAA
ATTTTTTTTTAAACTTTTAGATTTTATATCATTAAAAAGGGGAACAAACACTACTTTAAA
TGGTTTCCTCTTTTCTTCAATCATTGTGTTTTGCTTCAAAGCCGGGGGAAAAATTTAGGT
TTCGATTTTGAAGTACCTTTCAAAAAACGGAGTTAATTTTATTTTTTTTATGAAAAAATC
TTATTTTTAAAAACTTTTTTCATAATTTTTTTTATGAAAAAAGTTTCCGTAAGATTTAAA
AGTTGTTTTTTTTTATTTCTTCGAATATTATAAATAAATAAAAAAAAATTAGCAAATACT
TTTAATCGTTATTAGTTTCTTTTATTTTTTGTTTTGTAAAATCGGTAGTTGTAAAAATTA
CAGGCTTTTTTTTAGATTAGGAGTAATATTTTTTTAAAACGAATTAGTAAAAAAAAAAAA
CAATACTTTATAATAGGAAAAAACTGTTGCGAACAGGGGGAATCGAACCCCCGACTTCGC
CTTGGCAAGGCGACATTTTACCCCTAAACTATGTTCGCTTTTATGGACTTTACTTATTTT
AATGAAAGCATAAAACTCTGTCAACTGGAAGTTAATGCACGATTCTTTAAATTAATTTTA
GAACGAATTAAACTCTTTTAACATATTATCATATTATTTCGCTCTCTTTTTTTGAAACGA
TTCTAGTTTTTAATTTTTTAGTTTCTTATTTTAAAGAAACAAATTTTCTTTTTGACGGAA
TAATTTTAAAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008114_126.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008114_126 count=1; cluster_weight=1; cluster=RRNA23S_NC_008114_126; cluster_score=1.000000; cluster_center=True;
gtttgtctagccatatccgacattattatacctaaaaaaaaacgtaaatcaaagttttttaatagaaaaacgttttatagaagccaaaaaattccattttttccttaataattttgatttcgtttttgaacttcttataattttttattttgtaaagtttccgctaaaaatttctttttaaaattcataaaaacttagctataagtttcacagatattttttttcttagtttaaaatccattaaaaaattacgatataatctaaaattgacaacttcaacgcgctgcttttaccgtgtcttcccttttgagcagctttgaagttttgctccttgcttcgctactactcaaaggggaattcttttggaacaaataaagccgaatacagcaagggatagcaaaaaaaactgcggttttgaattgaataaagaaggaattaactttcggtattcaaatcttttgttatagctttttctaaatttaatttttttgacgctctacttgctataaaataggcttggattgcttgttttaaggctttttttttccaaactgtttttcttaaatttgtttttgatttagatgttcgtttttttggaactgccattttctttctcctttgttaagaacactttttagacttatttttcatctttttcattttaaaatgaaagtcgggcattctttgtgatagtatttatataataaaaagagtggttcaacaataaaaatgaaccaacttttttatatgaaaaacaatgttttcaaatttgatggtaaaatttttttttaaacttttagattttatatcattaaaaaggggaacaaacactactttaaatggtttcctcttttcttcaatcattgtgttttgcttcaaagccgggggaaaaatttaggtttcgattttgaagtacctttcaaaaaacggagttaattttattttttttatgaaaaaatcttatttttaaaaacttttttcataattttttttatgaaaaaagtttccgtaagatttaaaagttgtttttttttatttcttcgaatattataaataaataaaaaaaaattagcaaatacttttaatcgttattagtttcttttattttttgttttgtaaaatcggtagttgtaaaaattacaggcttttttttagattaggagtaatatttttttaaaacgaattagtaaaaaaaaaaaacaatactttataataggaaaaaactgttgcgaacagggggaatcgaacccccgacttcgccttggcaaggcgacattttacccctaaactatgttcgcttttatggactttacttattttaatgaaagcataaaactctgtcaactggaagttaatgcacgattctttaaattaattttagaacgaattaaactcttttaacatattatcatattatttcgctctctttttttgaaacgattctagtttttaattttttagtttcttattttaaagaaacaaattttctttttgacggaataattttaaat

52
data/rrna/RRNA_23S/00001_RRNA23S_NC_008116_121.align.fasta Normal file
View File

@@ -0,0 +1,52 @@
>RRNA23S_NC_008116_121 count=1; cluster_weight=1; cluster=RRNA23S_NC_008116_121; cluster_score=1.000000; cluster_center=True;
GTTCAAATAATTAAGGGCTTATGGTGGATACCTAGGCACCCAGAGACGAAGAAGGGCGTA
GCAAGCGACGAAATGCTTCGGGAAGCTGAGAACAAGCATTGATCCGGAGATGCCCGAATA
GGGGAACCTATTTGACTGCCTGCTGAATTGATAGGGAGGCAAGAGACAACCTGGCGAACT
GAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCTGAGTAGTGGCGAGC
GAAATGGGAACAGCCTAAACCGGCTTCCGTTTTGGGAGTCGGGGTTGTGGGAGAGCGACA
GTTGTTAAGAGTTACTAGACGAAGCAGCTGAGTCCTGCACCTGAGATGGTGAGAGTCCAG
TAGTTGAAAGTATCTCTAACAAACGCTAATTCCCGAGTAGCATGGGGCACGTGAAATCCC
GTGTGAATCAGCGAGGACCACCTCGTAAGGCTAAATACTCCTGGGTGACCGATAGTGAAG
TAGTACCGTGAGGGAAAGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAAC
CGTAAGCCTCCAAGCAGTGGGAGGAGAATGGAATCTCTGACCGCGTGCCTGTTGAAGAAT
GAGCCGGCGACTTATAGGCAGTGGCCTGGTTAAGGCGTGAAGCCGGAGCCGTAGCGAAAG
CGAGTCTTTCTAGGGCGAATGTCACTGCTTATGGACCCGAACCCGGGTGATCTAACCATG
GCCAGGGTGAAGCTTGGGTGAAGCCAAGTGGAGGTCCGAACCGACTGATGTTGAAAAATC
AGCGGATGAGCTGTGGTTAGGGGTGAAATGCCACTCGAACTCGGAGCTAGCTGGTTCTCC
CCGAAATGCGTTGAGGCGCAGCGGTTGACTGGACTGCCTAGGGGTAAAGCACTGTTTCGG
TGCGGGCTGCGAAAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGGCACGACATCGG
TCAGCCAGTAAGACGGTGGGGGATAAGCTTCATCGTCAAGAGGGAAACAGCCCAGACCAC
CAGCTAAGGCCCCTAAATGACCGCTCAGTGGCAAAGGAGGTGAGAGTGCAAAGACAGCCA
GGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCG
CTCTTGCGCCGAAGATGAACGGGACTAAGCGGTCTGCCGAAGCTGTGGGATGTCCATTAG
GGCATCGGTAGGGGAGCGTTCCGCAAACGGGAGAAGCATCAGTGTAAACAGGTGTGGACG
AAGCGGAAGTGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCG
AAAACCCAAGGGTTCCTCCGCAAGGCTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCA
TGCCGAACGGCGCAGTCGATGGACAACAGGTCAAGATTCCTGTACTACCCCTTGTCGGCA
ATAAGAGGGACGGAGGAGGCTAAGCTAGCCGAATAATGGTCATCGGTTCAAGGGCCTGAA
AACCTGAGTACTAGGCACCTACGGGGCCGAAGTAGCTGATGCCACGCTCCCAAGAAAAGC
TCTTACGCCAATACTGACACGAAGTGTGTCTGAAAAAGCAAAGATTTGATTTCCTTTAAA
AGAAAAAAATCGTTGTTTTTTCAACAAAACAAAAATAAGACAAGTGCCCGAAAGGGTCCC
ATATATATGGGAGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTTGAGAATACCTA
GGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAGATGGCCCCGTAACTTCGGGAGAA
GGGGTGCCCCTCTGGGGCCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGG
TCTCCGCAAAGTCGCAAGACGACGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTA
AGGAAGTCGGTGACTCGATACGAGGAAGCTGGCGACCGAAGCCCCGGTGAACGGCGGCCG
TAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAA
AGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACTTGTCTGTGA
AGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCCCTGGGA
TGGGGTTTGGGCCCTTCTTGCGCAGTCTAGGTGGGAGGCGAAGACGGCGTCCTTCCGGGG
ACGCTCGAGCCGAAGATGAGAGACCACCCTAGAAGGGCTAGGATTCTAACCTTATGCCTA
GAAGAAGGCTAGGGGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAG
GGTAACGGAGGCGTGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCTTCGAGTGCAAA
GGCAGAAGGGAGCTTGACTGCAAGACCTACCCGTCGAGCAGGGACGAAAGTCGGCCTTAG
TGATCCGACGGTTCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGAT
AACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGG
CTCTTCGCCACCTGGCGCGGTAGTACGTGCCAAGGGTTGGGCTGTTCGCCCATTAAAGCG
GTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTTGGTCCATATCCGGTGCAGGCGTT
AGAGCATTGAGAGGATCTCTCCCTAGTACGAGAGGACCGGGAGGGACGCACCGCTGGTGT
GCCAGTTATCGTGCCAACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGA
AAGCATCTAAGTAGGAAGCCCACCTCAAGATGAGTGCTCTCCCCACGTACATACCCTATT
ATGGGAGTACGGAACGGGAAATCAATCCCGTCAAATGAGGTCACGGCAAGACCAGCCGTT
TGTTACAATAGGTGCCAGGTAGAAGTCCCGTAAGGGATGTAGCTGAGGCATCCTAACAGA
CCGAGAGATTTGAAC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008116_121.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008116_121 count=1; cluster_weight=1; cluster=RRNA23S_NC_008116_121; cluster_score=1.000000; cluster_center=True;
gttcaaataattaagggcttatggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccggcttccgttttgggagtcggggttgtgggagagcgacagttgttaagagttactagacgaagcagctgagtcctgcacctgagatggtgagagtccagtagttgaaagtatctctaacaaacgctaattcccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtaagcctccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggcgtgaagccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggcacgacatcggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactaccccttgtcggcaataagagggacggaggaggctaagctagccgaataatggtcatcggttcaagggcctgaaaacctgagtactaggcacctacggggccgaagtagctgatgccacgctcccaagaaaagctcttacgccaatactgacacgaagtgtgtctgaaaaagcaaagatttgatttcctttaaaagaaaaaaatcgttgttttttcaacaaaacaaaaataagacaagtgcccgaaagggtcccatatatatgggaggtacctgtacccgaaaccgacacaggtgggtaggttgagaatacctaggggcgcgagacaactctctctaaggaactcggcaagatggccccgtaacttcgggagaaggggtgcccctctggggccgcagtgaccaggcccaggcgactgtttaccaaaaacacaggtctccgcaaagtcgcaagacgacgtatgggggctgacgcctgcccagtgccggaaggttaaggaagtcggtgactcgatacgaggaagctggcgaccgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagaggctcggtgaaatagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggatggggtttgggcccttcttgcgcagtctaggtgggaggcgaagacggcgtccttccggggacgctcgagccgaagatgagagaccaccctagaagggctaggattctaaccttatgcctagaagaaggctaggggacagtcccaggtagacagtttctatggggcgtaggcctcccaaagggtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccttcgagtgcaaaggcagaagggagcttgactgcaagacctacccgtcgagcagggacgaaagtcggccttagtgatccgacggttccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggcgcggtagtacgtgccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagtttggtccatatccggtgcaggcgttagagcattgagaggatctctccctagtacgagaggaccgggagggacgcaccgctggtgtgccagttatcgtgccaacggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtaggaagcccacctcaagatgagtgctctccccacgtacataccctattatgggagtacggaacgggaaatcaatcccgtcaaatgaggtcacggcaagaccagccgtttgttacaataggtgccaggtagaagtcccgtaagggatgtagctgaggcatcctaacagaccgagagatttgaac

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_008117_506.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_008117_506 count=1; cluster_weight=1; cluster=RRNA23S_NC_008117_506; cluster_score=1.000000; cluster_center=True;
AATGCTGGTACCTTAAGCGCAGAGGCAACACGCTAACCCATCCCGAACTTGGCGGTGAAA
CTCTGCTGCAGTGACAATACTGCAGGAGAAGTCCTGTGGGAAGATAGCTCGGCGCCAGCT
TA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008117_506.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008117_506 count=1; cluster_weight=1; cluster=RRNA23S_NC_008117_506; cluster_score=1.000000; cluster_center=True;
aatgctggtaccttaagcgcagaggcaacacgctaacccatcccgaacttggcggtgaaactctgctgcagtgacaatactgcaggagaagtcctgtgggaagatagctcggcgccagctta

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_008155_76.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_008155_76 count=1; cluster_weight=1; cluster=RRNA23S_NC_008155_76; cluster_score=1.000000; cluster_center=True;
CGCCCCTGATAATTGCGTCGTTGTGCCTGGGCTGTGAGGGCTCTCAGCCACATGGATAGT
TCAATGTGCTCATCAGCGCCTGACCCGAAGATGTGGATCATCCAAGGCACATTAGCATGG
CGTACTCCTCCTGTTTGAATCGGAGTTTGAAACCAAACAAACTTCTCCTCAGGAGGATAG
ATGGGGCGATTCAGGTGAGATCCCATGTAGATCTAACTTTCTATTCACTCGTGGGATCCG
GGCGGTCCGGGGGGGGCACTACGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCA
GTGTATGGAGAGCTATCTCTCGAGCACAGGTTGAGGTTCGTCCTCAATGGGAAAATGGAG
CACCTAACAACGCATCTTCACAGACCAAGAACTACGAGATCACCCTTTCATTCTGGGGTG
ACGGAGGGATCGTACCATTCGAGCCTTTTTTTCATGCTTTTCCCGGCGGTCTGGAGAAAG
CAGCAATCAATAGGACTTCCCTAATCCTCCCTTCCTGAAAGGAAGAACGTGAAATTCTTT
TTCCTTTCCGCAGGGACCAGGAGGTTGGATCTAGCCATAAGAGGAATGCTTGGTATAAAT
AAGCCACTTCTTGGTCTTCGACTCCCTAAGTCACTACGAGCGCCCTCGATCAGTGCAATG
GGATGTGGCTATTTATCTATCTCTTGACTCGAAATGGGAGCAGAGCAGGTTTGAAAAAGG
ATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTCTCTTAACGCCTTCCTTTTTCTGCCCA
TCGGAGTTATTTCCCAAGGACTTGCCATGGTAAGGGGGAGAAGGGGAAGAAGCACACTTG
AAGAGCGCAGTACAACGGAGAGTTGTATGCTGCGTTCGGGAAGGATGAATCGCTCCCGAA
AAGGAGTCTATTGATTCTCTCCCAATTGGTTGGATCGTAGGGGCGATGATTTACTTCACG
GGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTGCGCCAGGGAAAAGAATAGAAGA
AGCATCTGACTCTTTCATGCATACTCCACTTGGCTCGGGGGGATATAGCTCAGTTGGTAG
AGCTCCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTGGCTGTCTAATTGTCCAGGCG
GTAATGGTAGTATCTTGTACCTGAACCGGTGGCTCACTTTTTCTAAGTAATGGGGAAGAG
GACTGAAACATGCCACTGAAAGACTCTACTGAGACAAAAAGATGGGCTGTCAAAAAGGTA
GAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGATAGTTGG
AGTCGGCGGCTCTCCTAGGCTTCCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGG
CCCTTGCGAATAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGTGGCAAAA
GGAAGGAAAATCCATGGACCGACCCCATTATCTCCACCCCGTAGGAACTAC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008155_76.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008155_76 count=1; cluster_weight=1; cluster=RRNA23S_NC_008155_76; cluster_score=1.000000; cluster_center=True;
cgcccctgataattgcgtcgttgtgcctgggctgtgagggctctcagccacatggatagttcaatgtgctcatcagcgcctgacccgaagatgtggatcatccaaggcacattagcatggcgtactcctcctgtttgaatcggagtttgaaaccaaacaaacttctcctcaggaggatagatggggcgattcaggtgagatcccatgtagatctaactttctattcactcgtgggatccgggcggtccggggggggcactacggctcctctcttctcgagaatccatacatcccttatcagtgtatggagagctatctctcgagcacaggttgaggttcgtcctcaatgggaaaatggagcacctaacaacgcatcttcacagaccaagaactacgagatcaccctttcattctggggtgacggagggatcgtaccattcgagcctttttttcatgcttttcccggcggtctggagaaagcagcaatcaataggacttccctaatcctcccttcctgaaaggaagaacgtgaaattctttttcctttccgcagggaccaggaggttggatctagccataagaggaatgcttggtataaataagccacttcttggtcttcgactccctaagtcactacgagcgccctcgatcagtgcaatgggatgtggctatttatctatctcttgactcgaaatgggagcagagcaggtttgaaaaaggatcttagagtgtctagggttgggccaggagggtctcttaacgccttcctttttctgcccatcggagttatttcccaaggacttgccatggtaagggggagaaggggaagaagcacacttgaagagcgcagtacaacggagagttgtatgctgcgttcgggaaggatgaatcgctcccgaaaaggagtctattgattctctcccaattggttggatcgtaggggcgatgatttacttcacgggcgaggtctctggttcaagtccaggatggcccagctgcgccagggaaaagaatagaagaagcatctgactctttcatgcatactccacttggctcggggggatatagctcagttggtagagctccgctcttgcaattgggtcgttgcgattacgggttggctgtctaattgtccaggcggtaatggtagtatcttgtacctgaaccggtggctcactttttctaagtaatggggaagaggactgaaacatgccactgaaagactctactgagacaaaaagatgggctgtcaaaaaggtagaggaggtaggatgggcagttggtcagatctagtatggatcgtacatggacgatagttggagtcggcggctctcctaggcttccctcatctgggatccctggggaagaggatcaagttggcccttgcgaatagcttgatgcactatctcccttcaaccctttgagcgaaatgtggcaaaaggaaggaaaatccatggaccgaccccattatctccaccccgtaggaactac

3
data/rrna/RRNA_23S/00001_RRNA23S_NC_008289_192.align.fasta Normal file
View File

@@ -0,0 +1,3 @@
>RRNA23S_NC_008289_192 count=1; cluster_weight=1; cluster=RRNA23S_NC_008289_192; cluster_score=1.000000; cluster_center=True;
TCTTGGCATCGACACGTTTTCACTATCAGTGGCCCGATAGCTATCTTAGTCTCAAAAACC
TTTCACCACGCAGTTCTGATGGGATGCTGTGTTTCGATTGTGACGAAGACACCAAG

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008289_192.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008289_192 count=1; cluster_weight=1; cluster=RRNA23S_NC_008289_192; cluster_score=1.000000; cluster_center=True;
tcttggcatcgacacgttttcactatcagtggcccgatagctatcttagtctcaaaaacctttcaccacgcagttctgatgggatgctgtgtttcgattgtgacgaagacaccaag

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_008372_462.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_008372_462 count=1; cluster_weight=1; cluster=RRNA23S_NC_008372_462; cluster_score=1.000000; cluster_center=True;
TTCTCGGTGTCCAAGTTTAATAGGTCCCACGTCAATCCATCCCGAACTTGACAGTGAAAC
TATTACTGAGAACGAAAAGGTGCATGGGAGACTGTGTGTACTTTCGATCTTGATGCCGGG
AA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008372_462.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008372_462 count=1; cluster_weight=1; cluster=RRNA23S_NC_008372_462; cluster_score=1.000000; cluster_center=True;
ttctcggtgtccaagtttaataggtcccacgtcaatccatcccgaacttgacagtgaaactattactgagaacgaaaaggtgcatgggagactgtgtgtactttcgatcttgatgccgggaa

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_008822_199.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_008822_199 count=1; cluster_weight=1; cluster=RRNA23S_NC_008822_199; cluster_score=1.000000; cluster_center=True;
TTACGTTTGTGGTGTAAATCCTTTCTTAAGCCGTACAGCTACTATTTTGATGCGACGACG
TAAATGTAAATTAATTGGAGCACCATTTCCAATTGGCCCAGATGGTACACGAGCTTGGGT
TGAAAAGATCTGTTCTGTATTCAATGTAGAACCTATTGGCTTAGCAGAGCGTGAAAATAA
AATATGGGAAGGACTAGAAGATTATCTTCAATTAGTTCGTGGTAAATCTGTATTCTTTAT
GGGAGACAATTTACTTGAGGTATCATTAGCTCGTTTTTTAACACGATGTGGCATGATTGT
TTATGAAATTGGTATTCCTTATATGGATAAGCGTTATCAAGCAGCAGAATTGGCTTTACT
TGAAAAAACTTGTCAAGAAATGGGAGTCCCGATGCCAAGAATCGTTGAAAAACCAGATAA
TTATAATCAAATCCAAAGGATTCGAGAATTACAACCAGATTTAGCCATTACCGGAATGGC
CCATGCTAATCCGTTGGAAGCTAGAGGTATAAGTACAAAATGGTCAGTTGAATTTACCTT
TGCTCAGATTCACGGATTTACAAATGCCCGTGATATTCTCGAACTAGTTACTCGACCATT
AAGAAGAAATAACAGTTTAGAAGGTTTAGGTTGGACCAGCTTAGTCAAAGAAGGTGTTCT
GTCAAATTAAGTCAAACCTTGTGAAACGCAACCAATGTTTAAACTTTTCAATGTTTAGAC
CTTTCAATGTTTAAACCTTTGGGACCCTAATTGAAAAAGGCAACAGCCACAACGGTTGTG
GCTGTTGCCTTTTGGCTTCGCCGCTACTCTTTTATTTTAAATAAATAAATATTTAAAATA
TTATGGGTTTGCCACACCTGCTTTCATTCGCTGAGTCAGATCGGAGATTCGTTGTTTTCG
ATCTTGAAGCATTCGATTATAATCCGATTCTTTTATTTCTCGTACAATAATTCTTTTACT
CTGATTGTCACTTAGATAAGGAGAAAGATCTTCTTTTGTAGCAAGTTGTGGATCTATAAA
ACTTGGATGTTGATAAAATTTAACTTTCTCTTGTTGAATGGAAAGCAAAGATAAAATCTT
ATCCCTTATAAAGCGATAATTTTGACTTCGAGAAAACCATTTTTTGTCTCGAACAAGTTC
CATTGCCTTATAATCCCTTGCATATTTGCCTGAACTAGTCTTTTTCCTAGGAAGCCCTCT
CGCATCTAAGTCTTGCAAACCGGTTACATTTTTTCTAAACCACTTACCAAACTCTTTTAC
GGGAAGTCCTCCGAGTGTTTTCATTGGTTCAGACCTAGTCTTGACCAACATTTTATGCTT
GTAATTTGAAAATGCTCTAATGATTTCAATATCATCAAGAAATTCTAATTCCGGACTTGC
TTTTAGTGGTGCTGACAAAGTAGTGAAAGATAATCCTTGATAAAAATCGATGTGATAATA
GATTGTAGATATTAAGAGTAGAGTAAGTGTTAAACTAGAAACAATCTTATT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_008822_199.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_008822_199 count=1; cluster_weight=1; cluster=RRNA23S_NC_008822_199; cluster_score=1.000000; cluster_center=True;
ttacgtttgtggtgtaaatcctttcttaagccgtacagctactattttgatgcgacgacgtaaatgtaaattaattggagcaccatttccaattggcccagatggtacacgagcttgggttgaaaagatctgttctgtattcaatgtagaacctattggcttagcagagcgtgaaaataaaatatgggaaggactagaagattatcttcaattagttcgtggtaaatctgtattctttatgggagacaatttacttgaggtatcattagctcgttttttaacacgatgtggcatgattgtttatgaaattggtattccttatatggataagcgttatcaagcagcagaattggctttacttgaaaaaacttgtcaagaaatgggagtcccgatgccaagaatcgttgaaaaaccagataattataatcaaatccaaaggattcgagaattacaaccagatttagccattaccggaatggcccatgctaatccgttggaagctagaggtataagtacaaaatggtcagttgaatttacctttgctcagattcacggatttacaaatgcccgtgatattctcgaactagttactcgaccattaagaagaaataacagtttagaaggtttaggttggaccagcttagtcaaagaaggtgttctgtcaaattaagtcaaaccttgtgaaacgcaaccaatgtttaaacttttcaatgtttagacctttcaatgtttaaacctttgggaccctaattgaaaaaggcaacagccacaacggttgtggctgttgccttttggcttcgccgctactcttttattttaaataaataaatatttaaaatattatgggtttgccacacctgctttcattcgctgagtcagatcggagattcgttgttttcgatcttgaagcattcgattataatccgattcttttatttctcgtacaataattcttttactctgattgtcacttagataaggagaaagatcttcttttgtagcaagttgtggatctataaaacttggatgttgataaaatttaactttctcttgttgaatggaaagcaaagataaaatcttatcccttataaagcgataattttgacttcgagaaaaccattttttgtctcgaacaagttccattgccttataatcccttgcatatttgcctgaactagtctttttcctaggaagccctctcgcatctaagtcttgcaaaccggttacattttttctaaaccacttaccaaactcttttacgggaagtcctccgagtgttttcattggttcagacctagtcttgaccaacattttatgcttgtaatttgaaaatgctctaatgatttcaatatcatcaagaaattctaattccggacttgcttttagtggtgctgacaaagtagtgaaagataatccttgataaaaatcgatgtgataatagattgtagatattaagagtagagtaagtgttaaactagaaacaatcttatt

27
data/rrna/RRNA_23S/00001_RRNA23S_NC_009681_197.align.fasta Normal file
View File

@@ -0,0 +1,27 @@
>RRNA23S_NC_009681_197 count=1; cluster_weight=1; cluster=RRNA23S_NC_009681_197; cluster_score=1.000000; cluster_center=True;
TTAATAAGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCATGCTTAACACATGCA
AGTTGTACGAAATGATTTTCTTTGGATATCATTTAGTGGCGGACGGGTGCGTAACGCGTA
AGAATCTACCCTTAGGTGTGGGATAACTATTGGAAACGGTAGCTAATACCGCATATGCTG
AGGAGTGAAAGCTTGAAAAAGCGCCTAGGGATGAGCTTGCGTCTGATTAGTTTGTTGGTG
GGGTAAAAGCTTACCAAGACTACGATCAGTAGTTGGTCTGAGAGGATGATCAGCCACACT
GGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATTTTCCGCAATGG
GCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGATGAAGGCTCGCGGGTCGTAAACTCCT
TTTCTCGAAGAAGAAAAAAATGACGGTACTCGAGGAATAAGTATCGGCTAACTCCGTGCC
AGCAGCCGCGGTAATACGGGGGATACAAGCGTTGTCCGGAATGATTGGGCGTAAAGCGTC
TGTAGGTGGCTTATGAAGTCTGCTGTTAAATACCAGGGCTTAACCTTGGGAAAGCGGTGG
AAACTCTTGAGCTGGAGTTCGGTAGGGGCAGAGGGAATTCCTAGTGTAGCGGTGAAATGC
GTAGATATTAGGAAGAACACCGATAGCGAAAGCACTCTGCTGGGCCTGAACTGACACTGA
GAGACGAAAGCTAGGGGAGCAAAAAGGATTAGATACCCTTGTAGTCCTAGCCGTAAACGA
TGGATACTCGGTAGTGCTTGGATGACACCAAGCGCCGCCTCAGCTAACGCGTTAAGTATC
CCGCCTGGGGAGTACGCTCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAA
GCGGTGGAACATGTTGCTTAATTCGATGATACGCGAAGAACCTTACCAGGGCTTGACATG
GTCTTATATACACTCTCTGAAAATAGAGTGTTGAACAGAAATGTTCTCGGGCACACAGGT
GGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTAGAGTTAAGTCTCGTAACGAGCGC
AACCCTTGTCCTAAATTAACTCATAGTTACTATGTACTTTTAGGAGATTGCCAGCGTTAA
GTTGGATGAGAGTGAGGATGATGTCAAGTCAGCATGCCCCTTACGCCCTGGGCTGCAAAC
GTGTTACAATGGGTGGGACAAAGAGATGCTAACCTGCGAGGGCTTGCCAACCTCAAAAAC
CCATTCTCAATTCGGATTGCAGGCTGCAACTCGCCTGCATGAAGGTGGAATCGCTAGTAA
TCGCCGGTCAGCTACACGGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAC
ACCATGGAAGCTGGTTCGGCCCCAAGTCGTTATCTTAACCTGGTCGTATTTAACGTCTAG
GAAGGAGACGCCCAAGGCAGAACCCGTGACTAGGGTGAAGTCGTAACAAGGTAGCCCTTT
TGGAAGAAGGGGCTGGATCACCTCCTGG

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_009681_197.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_009681_197 count=1; cluster_weight=1; cluster=RRNA23S_NC_009681_197; cluster_score=1.000000; cluster_center=True;
ttaataagagagtttgatcctggctcaggacgaacgctggcggcatgcttaacacatgcaagttgtacgaaatgattttctttggatatcatttagtggcggacgggtgcgtaacgcgtaagaatctacccttaggtgtgggataactattggaaacggtagctaataccgcatatgctgaggagtgaaagcttgaaaaagcgcctagggatgagcttgcgtctgattagtttgttggtggggtaaaagcttaccaagactacgatcagtagttggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtgaggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggatgaaggctcgcgggtcgtaaactccttttctcgaagaagaaaaaaatgacggtactcgaggaataagtatcggctaactccgtgccagcagccgcggtaatacgggggatacaagcgttgtccggaatgattgggcgtaaagcgtctgtaggtggcttatgaagtctgctgttaaataccagggcttaaccttgggaaagcggtggaaactcttgagctggagttcggtaggggcagagggaattcctagtgtagcggtgaaatgcgtagatattaggaagaacaccgatagcgaaagcactctgctgggcctgaactgacactgagagacgaaagctaggggagcaaaaaggattagatacccttgtagtcctagccgtaaacgatggatactcggtagtgcttggatgacaccaagcgccgcctcagctaacgcgttaagtatcccgcctggggagtacgctcgcaagggtgaaactcaaaggaattgacgggggcccgcacaagcggtggaacatgttgcttaattcgatgatacgcgaagaaccttaccagggcttgacatggtcttatatacactctctgaaaatagagtgttgaacagaaatgttctcgggcacacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgtagagttaagtctcgtaacgagcgcaacccttgtcctaaattaactcatagttactatgtacttttaggagattgccagcgttaagttggatgagagtgaggatgatgtcaagtcagcatgccccttacgccctgggctgcaaacgtgttacaatgggtgggacaaagagatgctaacctgcgagggcttgccaacctcaaaaacccattctcaattcggattgcaggctgcaactcgcctgcatgaaggtggaatcgctagtaatcgccggtcagctacacggcggtgaatacgttcccgggccttgtacacaccgcccgtcacaccatggaagctggttcggccccaagtcgttatcttaacctggtcgtatttaacgtctaggaaggagacgcccaaggcagaacccgtgactagggtgaagtcgtaacaaggtagcccttttggaagaaggggctggatcacctcctgg

58
data/rrna/RRNA_23S/00001_RRNA23S_NC_010109_73.align.fasta Normal file
View File

@@ -0,0 +1,58 @@
>RRNA23S_NC_010109_73 count=1; cluster_weight=1; cluster=RRNA23S_NC_010109_73; cluster_score=1.000000; cluster_center=True;
CCACCCCGTAGGAACTACGAGATCACCCCAAGGACGCCTTCGGCATCCAGGGGTCACGGA
CCGACCATAGATCCTGTTCAATAAGTGGAACGCATTAGCAGTCCGTTCTCTGGTTGGGCA
GTAAGGGTCGGAGAAGGGCAATCACTCGTTCTTAAAACCAGCATTCTTAAAACCCAAGAG
TCGGGCAGAAAAAGGGGGAGAGTTCTCCGTTCCTGATTCTCCTGTAGCTGGATTCTCCGG
AACCACAAGAATCCTTAGAATGGGATTCCGACTCAGCACCTTTTGATATTTTGAGAAGAG
TTGCTCTTTGGAGAGCACAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATT
GTCTATCGTTGGCCTCTATAGTAGAATCAGTCGGGGAGGCCCGAGAGGCGGTGGTTTACC
CTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAGCCCGTGAACTTAGCCGAAAC
TATGATAGCACCCAATTTTGACGATTCGGCAGTTCGATCTATGATTTATCATTCATGGAC
GTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAACATGGCGAGG
TTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAG
TAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAG
GTTAACCTTTCGAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGA
AACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGA
AATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCT
GCTAGGCGAAGCGGTTGAATACTGCACCCTAGATGGCGAAAGTCCAGTAGCCGAAAGCAT
CACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCA
AGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGG
GAAAGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTGAGCTCTCAA
GCAGTGGGAGGAGAATCTGATCTCTGACCGTGTGCCTGTTGAAGAATGAGCCGGCGACTC
ATAGGCAGTGGCTTGGTTAAGGGAATCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATAG
GGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGC
TTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTG
TGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTG
AGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGA
GCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGACCCCAAAATAACGGAGGTCA
AGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCAGAT
CACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGAGTGCAGAGACAG
CCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGA
GCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAA
ATGCATCGGTAGGGGAGCGTTCCGCCTTAGATAGAAGCACCCGTGCAAGCAGGTGTGGAC
GAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCC
GAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATC
AGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGT
CCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGG
TGACCCTGATTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCAATGTCTGAGT
ACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACC
TTAAACAAGAGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAG
GGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAG
GGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAAC
ACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAA
GGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCAGCGACCGAAGCCCCGGTGAACGG
CGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCG
CACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGACTCGGTGAAATAGACATGT
CTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCC
CTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGAAGGCCTCCTT
CCGGGGAGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTG
TGTCAGTACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCC
TCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCCTCG
AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTC
GGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACT
CTAGGGATAACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTC
GATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCA
TTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTG
TGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACC
TCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATA
ACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_010109_73.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_010109_73 count=1; cluster_weight=1; cluster=RRNA23S_NC_010109_73; cluster_score=1.000000; cluster_center=True;
ccaccccgtaggaactacgagatcaccccaaggacgccttcggcatccaggggtcacggaccgaccatagatcctgttcaataagtggaacgcattagcagtccgttctctggttgggcagtaagggtcggagaagggcaatcactcgttcttaaaaccagcattcttaaaacccaagagtcgggcagaaaaagggggagagttctccgttcctgattctcctgtagctggattctccggaaccacaagaatccttagaatgggattccgactcagcaccttttgatattttgagaagagttgctctttggagagcacagtacgatgaaagttgtaagctgtgttcgggggggagttattgtctatcgttggcctctatagtagaatcagtcggggaggcccgagaggcggtggtttaccctgtggcggatgtcagcggttcgagtccgcttatctccagcccgtgaacttagccgaaactatgatagcacccaattttgacgattcggcagttcgatctatgatttatcattcatggacgttgataagatccttccatttagcagcaccttaggatggcatagccttaacatggcgaggttcaaacgaggaaaggcttacggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcgaactgctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgaatactgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtgagctctcaagcagtgggaggagaatctgatctctgaccgtgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacggaggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagatagaagcacccgtgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgagggacggaggaggctaggttagccgaaagatggttatcggttcaaggacgcaaggtgaccctgatttttcagggtaagaaggggtagagaaaatgcctcgagccaatgtctgagtaccaggcgctacggcgctgaagtaacccatgccatactcccaggaaaagctcgaacgaccttaaacaagagggtacctgtacccgaaaccgacacaggtgggtaggtagagaatacctaggggcgcgagacaactctctctaaggaactcggcaaaatagccccgtaacttcgggagaaggggtgcctcctcacaaagggggtcgcagtgaccaggcccgggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagaccatgtatgggggctgacgcctgcccagtgccggaaggtcaaggaagttggtgacctgatgacaggggagccagcgaccgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagagactcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttccggggaggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcagtacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgagtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggggctgtagtatgttccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtgggcgttagagcattgagaggacctttccctagtacgagaggaccgggaaggacgcacctctggtgtaccagttatcgtgcccacggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtagtaagcccaccccaagatgagtgctctcc

3
data/rrna/RRNA_23S/00001_RRNA23S_NC_010433_86.align.fasta Normal file
View File

@@ -0,0 +1,3 @@
>RRNA23S_NC_010433_86 count=1; cluster_weight=1; cluster=RRNA23S_NC_010433_86; cluster_score=1.000000; cluster_center=True;
GAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCAGTG
ATGTATGCAGCTGAGGCATCCTAACAGACCGGTAGACTTGAAC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_010433_86.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_010433_86 count=1; cluster_weight=1; cluster=RRNA23S_NC_010433_86; cluster_score=1.000000; cluster_center=True;
gaaggtcacggcgagacgagccgtttatcattacgataggtgtcaagtggaagtgcagtgatgtatgcagctgaggcatcctaacagaccggtagacttgaac

2794
data/rrna/RRNA_23S/00001_RRNA23S_NC_011031_496.align.fasta Normal file
View File

File diff suppressed because it is too large Load Diff

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_011031_496.fasta Normal file
View File

File diff suppressed because one or more lines are too long

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_012097_69.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_012097_69 count=1; cluster_weight=1; cluster=RRNA23S_NC_012097_69; cluster_score=1.000000; cluster_center=True;
CAATTGGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAATACATGCAA
GTTGAACGAGAATAGTAAAAGCTTGCTTTTACTAGGACAGTAGCGAACGGGTGAGTAATA
CGTAAGAATCTGCCCTTTGGAGGAGGAAAACGGTTGGAAACGACCGCTAATCCTGCATAT
GCCATTGGTAAAAGGTCTCTAACACGAGATTGCCAAAGGATGAGCTTACGCCTGATTAGC
TAGTTGGTGGGGTAAAAGCCTACCAAGGCAACGATCAGTAGCTGGTCTGAGAGGATGATC
AGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTAGGGAATTTT
CCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGGTGAAGGCCTATTGGGTT
GTTAACTCCTTTTCCCAGAGAAGAAACCTGACGGTATCTGGGGAATAAGCATCGGCTAAC
TCCGTGCCAGCAGCCGCGGTAATACGGGGGATGCAAGCGTTATCCGGAATTATTGGGCGT
AAAGAGTCCGTAGGTTGTTATCAAAGCCTATTGTTAAATATCAAGGCTTCACCTTGAATC
TGCAGTAGGAACCTGATAACTTGAGTGCGGTAGGAGTAGGGGGAATTCCCGGTGTAGCGG
TGAAATGCGTAGATATCGGGAAGAACACCGGAGGCGAAAGCGCCCTACTAGGCCGACACT
GACACTAAGGGACGAAAGCTAGGGGAGCAAACGGGATTAGATACCCCGGTAGTCCTAGCC
GTAAACGATGGGCACTACGTGTGGGGAAAACTTAGTTTTTTCTGTGCGATAGCTAACGCG
TTAAGTGCCCCGCCTGGGGAGTACGCTCGCAAGGGTGAAACTCAAAGGAATTGACGGGGG
CCCACACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGG
TTTGACATACCAGGAAGGTCCTTTAAACGGGACTGTGCCTTCGGGAATCTGGATACAGGT
GGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGC
AACCCCTATCGTACGTTACCTATAAGGCTCTCGTGCGAGACTGCCGGTGATAAGTCGGAG
GAAGGTGGGGATGACGTCAAGTCAGCATGCCCCTTACACCCTGGGCTACACACGTGCTAC
AATGGCCGGGACAAAGGGAAGCCAACCCGCGAGGGGGAGCAAATCTCATAAACCCGGTCT
CAGTTCGGATCGTAGGCTGCAACTCGCCTACGTGAAGTTGGAATCGCTAGTAATCGCGGG
TCAGCTATACCGCGGTGAATATGTTCCTGGGCCTTGTACACACCGCCCGTCACACCATGG
GAGCGGGCCATACCCAACGTCGTATCCTCTCAAAGGGAGCGCCTAAGGTAGGACTCGTGA
CTGGGGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGCGGCTGGATTACCTCCTAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_012097_69.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_012097_69 count=1; cluster_weight=1; cluster=RRNA23S_NC_012097_69; cluster_score=1.000000; cluster_center=True;
caattggagagtttgatcctggctcaggatgaacgctggcggcatgcttaatacatgcaagttgaacgagaatagtaaaagcttgcttttactaggacagtagcgaacgggtgagtaatacgtaagaatctgccctttggaggaggaaaacggttggaaacgaccgctaatcctgcatatgccattggtaaaaggtctctaacacgagattgccaaaggatgagcttacgcctgattagctagttggtggggtaaaagcctaccaaggcaacgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtagggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggagggtgaaggcctattgggttgttaactccttttcccagagaagaaacctgacggtatctggggaataagcatcggctaactccgtgccagcagccgcggtaatacgggggatgcaagcgttatccggaattattgggcgtaaagagtccgtaggttgttatcaaagcctattgttaaatatcaaggcttcaccttgaatctgcagtaggaacctgataacttgagtgcggtaggagtagggggaattcccggtgtagcggtgaaatgcgtagatatcgggaagaacaccggaggcgaaagcgccctactaggccgacactgacactaagggacgaaagctaggggagcaaacgggattagataccccggtagtcctagccgtaaacgatgggcactacgtgtggggaaaacttagttttttctgtgcgatagctaacgcgttaagtgccccgcctggggagtacgctcgcaagggtgaaactcaaaggaattgacgggggcccacacaagcggtggagcatgtggtttaattcgatgcaacgcgaagaaccttaccagggtttgacataccaggaaggtcctttaaacgggactgtgccttcgggaatctggatacaggtggtgcatggctgtcgtcagctcgtgtcgtgagatgttgggttaagtcccgcaacgagcgcaacccctatcgtacgttacctataaggctctcgtgcgagactgccggtgataagtcggaggaaggtggggatgacgtcaagtcagcatgccccttacaccctgggctacacacgtgctacaatggccgggacaaagggaagccaacccgcgagggggagcaaatctcataaacccggtctcagttcggatcgtaggctgcaactcgcctacgtgaagttggaatcgctagtaatcgcgggtcagctataccgcggtgaatatgttcctgggccttgtacacaccgcccgtcacaccatgggagcgggccatacccaacgtcgtatcctctcaaagggagcgcctaaggtaggactcgtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgcggctggattacctcctat

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_012099_96.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_012099_96 count=1; cluster_weight=1; cluster=RRNA23S_NC_012099_96; cluster_score=1.000000; cluster_center=True;
GAGGGGATGTTCGCTATATTACAAACCCTACTTTAAGTCCTTTTGTAATCTTTGGTTACA
TCCTAAAATCTCCATTTGGTGGAGACGGTTGGATTCCTAGTGTTGATAACATGGAAGATG
TTATTGGTGGACATATTTGGATTGGTAGTATTGAAATTTTTGGTGGTATTTGGCACATTC
TAACAAAGCCTTTTGCTTGGGCAAGACGTGCTTTTGTATGGTCAGGTGAAGCTTATCTTT
CATACAGTCTTGCAGCTGTTTCTTTAATGGCTTTAATTGCTGTACCTATGGTTTGGTTCA
ATAATACTGTTTACCCTAGTGAATTCTTTGGTCCTACAGGTCCTGAAGCATCACAGTCAC
AAGCTTTTACATTCCTTGTTCGTGACCAACGACTAGGTGCAAATGTTGCATCAGCTCAAG
GTCCTACAGGTTTAGGTAAATACCTAATGCGTTCTCCTACAGGAGAAATTATTTTTGGTG
GTGAAACAATGCGTTTTTGGGATTTTAGAGGTCCTTGGCTAGAGCCACTTCGTGGTCCTA
ATGGTCTTGATCTTAATAAGCTTAAAAATGATATTCAACCTTGGCAAGAACGTCGTTCTG
CTGAGTACATGACTCATGCACCTCTAGGTTCACTGAACTCGGTAGGTGGAGTTGCTACAG
AAATTAACGCAGTTAACTATGTAAACCCACGTAGTTGGTTAGCAACGTCTCATTTTGTTC
TAGGTTTCTTCTTTTTTATTGGCCACTTATGGCATGCAGGTCGTGCACGTGCTGCTGCTG
CTGGTTTTGAAAAAGGTATTGATCGTGATAATGAAGCGGTTCTTTCTATGCGTCCACTTG
ACTAATAGTTTGGCTAACATTCAGATTATTTAAAAATATTAGTTTTACAAAACTTTCTCT
TCTTTTTTAGAAATAAAAGAAGAGAAAGTTTTTATTACATTTTAATTGAATTTACTTGAA
AACGTGCTCTTGCGCGTTTAAAAGCAATATTAGCTTCAATTTTTTCTTTTCGACCATTAG
CTTTTTCAAGAATTTCTTTCGCAGATTGATATTCAATTTCTGCTTCTTCTGGATTAATAC
TTGAACCTAAAACAGCCTCATTAACAAGAATAGTGACTTTGTTATCTTTTACAAGAGCAA
AACCACCCATAAGTGCCATCGAAATCCATTCTGTTCCAGTTCGAACAAGCATTACACCAA
CATCTAGTCCTGTAATAAGTGGAGTGTGATTTTTTAATACACCCATTTGCCCAGTATTCG
TTGGTAAAATAAGCTCTGTAGCTTCTTCGTTCCAAAAAATACGATCCGGGGCCATAATAC
AAACTTGTAAACTCATCTTTTTTACTCCTTTTTCTTTACTTCAACTATTTATGATGCTAA
AGAAGCACCTTTTTCGATAGCCTCATCTAGATTACCTACTAAATAGAAAGATTGCTCAGG
AAGAGCATCTAACTGACCTGTAAGAATCATTTGGAAACCTTGAATGCTTTCTGCTAGAC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_012099_96.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_012099_96 count=1; cluster_weight=1; cluster=RRNA23S_NC_012099_96; cluster_score=1.000000; cluster_center=True;
gaggggatgttcgctatattacaaaccctactttaagtccttttgtaatctttggttacatcctaaaatctccatttggtggagacggttggattcctagtgttgataacatggaagatgttattggtggacatatttggattggtagtattgaaatttttggtggtatttggcacattctaacaaagccttttgcttgggcaagacgtgcttttgtatggtcaggtgaagcttatctttcatacagtcttgcagctgtttctttaatggctttaattgctgtacctatggtttggttcaataatactgtttaccctagtgaattctttggtcctacaggtcctgaagcatcacagtcacaagcttttacattccttgttcgtgaccaacgactaggtgcaaatgttgcatcagctcaaggtcctacaggtttaggtaaatacctaatgcgttctcctacaggagaaattatttttggtggtgaaacaatgcgtttttgggattttagaggtccttggctagagccacttcgtggtcctaatggtcttgatcttaataagcttaaaaatgatattcaaccttggcaagaacgtcgttctgctgagtacatgactcatgcacctctaggttcactgaactcggtaggtggagttgctacagaaattaacgcagttaactatgtaaacccacgtagttggttagcaacgtctcattttgttctaggtttcttcttttttattggccacttatggcatgcaggtcgtgcacgtgctgctgctgctggttttgaaaaaggtattgatcgtgataatgaagcggttctttctatgcgtccacttgactaatagtttggctaacattcagattatttaaaaatattagttttacaaaactttctcttcttttttagaaataaaagaagagaaagtttttattacattttaattgaatttacttgaaaacgtgctcttgcgcgtttaaaagcaatattagcttcaattttttcttttcgaccattagctttttcaagaatttctttcgcagattgatattcaatttctgcttcttctggattaatacttgaacctaaaacagcctcattaacaagaatagtgactttgttatcttttacaagagcaaaaccacccataagtgccatcgaaatccattctgttccagttcgaacaagcattacaccaacatctagtcctgtaataagtggagtgtgattttttaatacacccatttgcccagtattcgttggtaaaataagctctgtagcttcttcgttccaaaaaatacgatccggggccataatacaaacttgtaaactcatcttttttactcctttttctttacttcaactatttatgatgctaaagaagcacctttttcgatagcctcatctagattacctactaaatagaaagattgctcaggaagagcatctaactgacctgtaagaatcatttggaaaccttgaatgctttctgctagac

27
data/rrna/RRNA_23S/00001_RRNA23S_NC_012101_60.align.fasta Normal file
View File

@@ -0,0 +1,27 @@
>RRNA23S_NC_012101_60 count=1; cluster_weight=1; cluster=RRNA23S_NC_012101_60; cluster_score=1.000000; cluster_center=True;
ATCGATTAATTCAACTTGCTTTACCACGTATTCGAGATTTTCAAGGTTTAAGCCAACAAA
GTTTTGATGGTCATGGAAACTATACCTTAGGTTTAAAAGAACAATTAATGTTCCCAGAAA
TTGATTACGACAAAATCGAAAAATCTCGAGGGATGGATATTTCAATCGTTACTTCAGCCA
AAAATGATCAAGATGCTTTTTTGCTCTTAAAAGCATTAGGAATGCCATTTAAAGCTGCTT
AAAATTAACTTCTTTTATTTCTTTAAAATTAAAATTTCTTTTACTGTAATTACAAGTTGA
AATATTAAATTTGTTCTTTTGCCGTTTTCGGAGGAAAGAAGTTCTCCCTTTTGCAACTCA
TCGGCTTGAATGTTTTTGTAAAGAGAATAGAAATGAAGTTTACTTTGTTGCTCTTTCTAA
GCAAACTGTATACCCTTCTCTCTGGAGGACCAAAGGGCCAAAGGCCTCCCCCTTCGGGGG
AGGAACGGAGTTCTTCCCACGCGATCCTCCCCCCATTTGCGGGGAGGCCTTCGGCCCTCA
AGGGGAAACCCAGCTCGTCCCCCTTCCACTTTGACCTGGTGTGCTTCAGCGCTTTGACCT
GGTGTGCTTCAGAGCTTTGACCTTTCAGGCCATAAATAAAAGCTCACCCCTTTGAGACCT
TTGGTCCTACGGTCCTTTCAAGTAATAAATAAAGCTCAAGCACACCAGGTCAAAGCGCGC
AAATGAACAAGGTCCTCAAAAGTAAAAACTATCCAGAGGAAACAAGTTTATAAAAACTTA
AAGAAAAAAACGAAGCACAGGGGGGAAATTAAAACGAAAGCTCCAACGATCAAATAATCT
AAAAAACAAAAAATATAAAACTGATATTACTTTAAAAATCTAGAAATAAATATATTACTG
GTTAACAATTCATATGGTGAATTACGCTGTAAGCGATATGCTTACTCGAATCCGAAACGG
AATTCGAGTTAAAAAAACAAAAGTTTCTGTTATTTCAACAAATTTAACAAGAAGTATTGC
TGAAATTTTAAAACGTGAAGGTTTTATTGAAAATTTCGCTACAACTCAAATGACAAAACC
TTCCGTTGGAAATTTAGCAACTACCGGAAATAAAAACTCTACTTTAGATATTTATCTAAA
ATGGTCTCAAAAAGACGGCTTAGGAAAAGCACAAAAAAATGTCTTAACAAACCTAAAGTG
TATTAGTCGTCCAGGTGTTCGCATTTATGCAAATGCCAATAATATTCCCCAAGTTCTTGG
TGGATTAGGCATCACAATTCTATCTACTTCAAAAGGCATCTTAACTGATTATGAAGCAAG
AAATCAAAAAGTTGGTGGAGAAGTTCTATGTATGCTTTGGTAAAACCTATTTAACTAGCC
AATTGCTGAACAACCTTACACTCAAGGGGTTTGAGCGGTTTGACCTGGTGTGCTTAAGCG
CTTGGACCTGGTGTGATTGAGCGGACCTTTTAGGTCATATATTAAGCTCAATCACACCAG
AGCTGGGGGGCCCCTTCAGGCCTTCGGCCCTCAAAGGGGTGAGCGCTTT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_012101_60.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_012101_60 count=1; cluster_weight=1; cluster=RRNA23S_NC_012101_60; cluster_score=1.000000; cluster_center=True;
atcgattaattcaacttgctttaccacgtattcgagattttcaaggtttaagccaacaaagttttgatggtcatggaaactataccttaggtttaaaagaacaattaatgttcccagaaattgattacgacaaaatcgaaaaatctcgagggatggatatttcaatcgttacttcagccaaaaatgatcaagatgcttttttgctcttaaaagcattaggaatgccatttaaagctgcttaaaattaacttcttttatttctttaaaattaaaatttcttttactgtaattacaagttgaaatattaaatttgttcttttgccgttttcggaggaaagaagttctcccttttgcaactcatcggcttgaatgtttttgtaaagagaatagaaatgaagtttactttgttgctctttctaagcaaactgtatacccttctctctggaggaccaaagggccaaaggcctcccccttcgggggaggaacggagttcttcccacgcgatcctccccccatttgcggggaggccttcggccctcaaggggaaacccagctcgtcccccttccactttgacctggtgtgcttcagcgctttgacctggtgtgcttcagagctttgacctttcaggccataaataaaagctcacccctttgagacctttggtcctacggtcctttcaagtaataaataaagctcaagcacaccaggtcaaagcgcgcaaatgaacaaggtcctcaaaagtaaaaactatccagaggaaacaagtttataaaaacttaaagaaaaaaacgaagcacaggggggaaattaaaacgaaagctccaacgatcaaataatctaaaaaacaaaaaatataaaactgatattactttaaaaatctagaaataaatatattactggttaacaattcatatggtgaattacgctgtaagcgatatgcttactcgaatccgaaacggaattcgagttaaaaaaacaaaagtttctgttatttcaacaaatttaacaagaagtattgctgaaattttaaaacgtgaaggttttattgaaaatttcgctacaactcaaatgacaaaaccttccgttggaaatttagcaactaccggaaataaaaactctactttagatatttatctaaaatggtctcaaaaagacggcttaggaaaagcacaaaaaaatgtcttaacaaacctaaagtgtattagtcgtccaggtgttcgcatttatgcaaatgccaataatattccccaagttcttggtggattaggcatcacaattctatctacttcaaaaggcatcttaactgattatgaagcaagaaatcaaaaagttggtggagaagttctatgtatgctttggtaaaacctatttaactagccaattgctgaacaaccttacactcaaggggtttgagcggtttgacctggtgtgcttaagcgcttggacctggtgtgattgagcggaccttttaggtcatatattaagctcaatcacaccagagctggggggccccttcaggccttcggccctcaaaggggtgagcgcttt

3
data/rrna/RRNA_23S/00001_RRNA23S_NC_012224_74.align.fasta Normal file
View File

@@ -0,0 +1,3 @@
>RRNA23S_NC_012224_74 count=1; cluster_weight=1; cluster=RRNA23S_NC_012224_74; cluster_score=1.000000; cluster_center=True;
CCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTC
CCGTCGATGTGAGCTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCG

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_012224_74.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_012224_74 count=1; cluster_weight=1; cluster=RRNA23S_NC_012224_74; cluster_score=1.000000; cluster_center=True;
cccttggaacatactacagccccaggtggcgaagagccgacatcgaggtgccaaaccttcccgtcgatgtgagctcttggggaagatcagcctgttatccctagagtaacttttatccg

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_012575_476.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_012575_476 count=1; cluster_weight=1; cluster=RRNA23S_NC_012575_476; cluster_score=1.000000; cluster_center=True;
AAACACATCAAGGAGAGTTTGATCCTGGCTCAGAAGGAACGCTGGCAGCGTGCATAACAC
ATGCAAGTCGAACGATGAAACATTCTTCGGAATGTGGAAGAGTGGCGAACGGGTGAGGAA
CACGTAAGAATCTGCCCCTCGGTCGGGGACAACTCTTGGAAACGAGAGCTAATACCCGAT
ACGCTGTGGAGTGAAAGAATTTCGCCGAGGGATGATCTTGCGTCTGATTAGCTAGTTGGT
GTGGTAATGGCATACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGATGAACAGCCACAT
TGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATG
GACGAAAGTCTGACGGAGCGACGCTGCGTGAAGGATGACGGCCTGCGGGTTGTAAACTTC
TTTTCTCGAAGAAGAAGCTCTGACGGTATTCGAGGAATAAGCATCGGCTAACTCCGTGCC
AGCAGCCGCGGTAATACGGAGGATGCAAGTGTTATTCGGAATGATTGGGCGTAAAGCGTC
TGTAGGCTGTATAGAAAGTCTTTTGTTAAATGCCTCGGCTCAACCGAGATCCAGCAAAGG
AAACTTCTATACTTGAGGGAAGTAGAGGTACAGGGAATTCCCGGTGGAGCGGTGAAATGC
GTAGATATCGGGAGGAACACCAATATGGCGAAGGCACTGTACTGGGCTTTACCTGACGCT
CAGAGACGAAAGCTAAAGGAGTGATTAGGATTAGATACCCTAGTAATTTTAGCCGTAAAC
GATGGAAACTCACTGCCGAGCGAAATACAACGAGCGGTGGTCAAGCTAACGCGTGAAGTT
TCCCGCCTGGGGATTACGCTTGCAAAAGTGAAACTCAAAGGAATTGACGGGGACCCGCAC
AAGCGGTGGAGTATGTGGTTTAATTCGATGCAACACGAAGAACCTTACCAGGGTTTGAAA
TCATTTCAAAACTCCTTGAAAGAGGAGCCTCCTTCGGGATGAAATGACAGGTGGTGCATG
GCTGTCGTCAGCTCGTGTTGTGAAATGTCGAGTTAAGTCTCGTAACGAGCGCAACCCATG
TCTCTTGTTGCTCACTGAGTGCTTAAGAGAGACTGCCGACCAACATCGGAGGAAGGTGTG
GATGATGTCAAGTCAGCATGCCCCTTACATCCTGGGCTACACACGTACTACAATGGTAGG
GACAATGAGCTGCGATCCTGCGAAGGCTAGCCAATCTCAAAAACCCTATCTCAGTTCGGA
TTGTACTCTGCAACTCGAGTACATGAAGGTGGAATCGCTAGTAATCGCTGGTCAGCTATA
CAGCGGTGAATACGTTCCCGGGTCTTGTACACACTGCCCGTCACACCATGGAAGCCGACT
CTTCCCTAAGTCGTTACTCGAACCCATTGGGACGAGGATGCCGAAGGCAGGGTTGGTGAC
TGGGGTGAAGTCGTAACAAGGTAGCCGTACTGGAAGGTGTGGCTGGAATACCTCCTTTT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_012575_476.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_012575_476 count=1; cluster_weight=1; cluster=RRNA23S_NC_012575_476; cluster_score=1.000000; cluster_center=True;
aaacacatcaaggagagtttgatcctggctcagaaggaacgctggcagcgtgcataacacatgcaagtcgaacgatgaaacattcttcggaatgtggaagagtggcgaacgggtgaggaacacgtaagaatctgcccctcggtcggggacaactcttggaaacgagagctaatacccgatacgctgtggagtgaaagaatttcgccgagggatgatcttgcgtctgattagctagttggtgtggtaatggcataccaaggcgacgatcagtagctggtctgagaggatgaacagccacattggaactgagacacggtccaaactcctacgggaggcagcagtggggaattttccgcaatggacgaaagtctgacggagcgacgctgcgtgaaggatgacggcctgcgggttgtaaacttcttttctcgaagaagaagctctgacggtattcgaggaataagcatcggctaactccgtgccagcagccgcggtaatacggaggatgcaagtgttattcggaatgattgggcgtaaagcgtctgtaggctgtatagaaagtcttttgttaaatgcctcggctcaaccgagatccagcaaaggaaacttctatacttgagggaagtagaggtacagggaattcccggtggagcggtgaaatgcgtagatatcgggaggaacaccaatatggcgaaggcactgtactgggctttacctgacgctcagagacgaaagctaaaggagtgattaggattagataccctagtaattttagccgtaaacgatggaaactcactgccgagcgaaatacaacgagcggtggtcaagctaacgcgtgaagtttcccgcctggggattacgcttgcaaaagtgaaactcaaaggaattgacggggacccgcacaagcggtggagtatgtggtttaattcgatgcaacacgaagaaccttaccagggtttgaaatcatttcaaaactccttgaaagaggagcctccttcgggatgaaatgacaggtggtgcatggctgtcgtcagctcgtgttgtgaaatgtcgagttaagtctcgtaacgagcgcaacccatgtctcttgttgctcactgagtgcttaagagagactgccgaccaacatcggaggaaggtgtggatgatgtcaagtcagcatgccccttacatcctgggctacacacgtactacaatggtagggacaatgagctgcgatcctgcgaaggctagccaatctcaaaaaccctatctcagttcggattgtactctgcaactcgagtacatgaaggtggaatcgctagtaatcgctggtcagctatacagcggtgaatacgttcccgggtcttgtacacactgcccgtcacaccatggaagccgactcttccctaagtcgttactcgaacccattgggacgaggatgccgaaggcagggttggtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgtggctggaatacctcctttt

51
data/rrna/RRNA_23S/00001_RRNA23S_NC_012978_117.align.fasta Normal file
View File

@@ -0,0 +1,51 @@
>RRNA23S_NC_012978_117 count=1; cluster_weight=1; cluster=RRNA23S_NC_012978_117; cluster_score=1.000000; cluster_center=True;
GTCAAAGGACACAAGGCGTAGGGTGGATACCTAGGCACCTAGAGACGAAGAAGGGCGTGG
TACCGACGAAATGCTCCGGGGAGCTGGAAACAAGCGATAATCCGGAGATTCCCGAATAGG
GCAACCTCTTGAACTACCTGCTGAATTCATAGGCAGGAAAGAGACAACCCAGTGAACTGA
AACATCTTAGTAGCTGGAGGAGAAGAAAGCAAAAGCGATTCCCTGAGTAGCGGCGAGCGA
AAAGGGACAAGCCTAAACCAGTTTTCGAACTGGGGTCGTGGGAAAACAAAAAAAAATAAT
CGATTGAAACGAAGCAGCTGAATCCTGCACCAAAGATGGTGAAAGTCCAGTAGTTAAAAA
TTGAAATCAACTTGTTTATCCCGAGTAGCATGGGGCACGTGAAATCCCGTGTGAATCAGC
GAGGACCACCTCGTAAGGCTAAATACTCCTAGGTGACCGATAGTGAAAAAGTACCGTGAG
GGAAAGGTGAAAAGAACCCCTGTAGGGGAGTGAAAAAGAACATGAAACCCTACGCTCTCA
AACAGTGGGAGGATAACAATATCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTA
GAAGAAGTGGCTTGGTTAAGGATAACTATCCGGAGCCAGAGCGAAAGCAAGTCTGAATAG
GGCGCTTAAAGGTCACTTTTTCTAGACCCGAACCCGGGTGATCTAACCATGACCAGGATG
AAGCTTGGGTAACACCACGTGAAGGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGA
GTTGTGGTTAGCGGTGAAATACCAATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAATGC
GTTGAGGCGCAGCGGTTTATGAGGCTGTCTAGGGGTAAAGCACTGTTTCGGTGCGGGCTG
CGAAAGCGGTACCAAATCGTGGCAAACTCTGAATACTAGATATGCTATTCATGAGCCAGT
GAGACGGTGGGGGATAAGCTTCATCGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGG
CCCCAAAATGGTCGTTAAGTGGCAAAGGAGGTGAGAATGCTGAAACAACCAGGAGGTTTG
CTTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGGTGGAGCGTTCTTGCGC
CGAAAATGTCCGGGACTAAACGACCTGCCGAAGCTGTGGGATACTTAATTCACTTGGTTC
CTTTTCAAAAATTTCATTTGGTCCAAAAACTGGGTTTTTGAAAAGAAAAGGAAAAGGAAC
AAAAATGAAAAAAAATAAAGTATCGGTAGGGGAGCGTTCTGCTGTAGGGTGAAGCATTGA
TGTAAGTTAATGTGGACGAAGCGGAAGTGAGAATGTCGGCTTGAGTAACGCAAACATTGG
TGAGAATCCAATGCCCCGTAAACCTAAGGATTCCTCCACTAGGTTCGTCCATGGAGGGTG
AGTCAGGACCTAAGGCCAGGCCGAAAGGCGTAGCCGATGGAAAACAGGTTAATATTCCTG
TACTACTTTTTGTTGGTATCGAGGGACGGAGCAGGCAGAGGTAGGCCGGATTTGGATTTC
GGTGGAAACTTTCAAGGCGTTGAGAGATAGAAGAAAAACTATCTTAAGCTAAGAAGTGAT
ACGTTTCAAAAACTTTGTTTTTGAAATCTACTGGCTGTCATACTTCCAAGAAAAGCTCGC
ACTACTCACAAGACAAAAAGTACCTGTACCGAAAACCGACACAGGTAGGTTGGTAGAGAA
TACCAAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATGACCCCGTAACTTCG
GGAGAAGGGGTGCCAAGTAAAAACTTGGCCGCAGTGACCAGGCCCAGGCGACTGTTTACC
AAAAACACAGGTCTCCGCAAAGTCGTAAGACAACATATGGGGGCTGACGCCTGCCCAGTG
CCGGAAGGTTAAGGAAGTTGGTTATTCTTGATAAAGAAAAAGCTAACGACCGAAGCCCCG
GTGAACGGCGGCCGTAACTATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTT
CCGACCCGCACGAAAGGCGTAACGATCTGGGCGCTGTCTCGGAGAGAGACTCGGTGAAAT
AGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTG
ACTGTAGCCTGAAATTGGGTTCGGGTTCTTCTTGCGCAGACTAGGTGGGAGGCGTTGAAA
GTTTCTTCTTGGGGAAACTGGAGCCAACAGTGAGAGACCACTCTGGAGGAGCTAGAATTC
TAATGGTGTTCCTTGAAGCAGGACACTTGACAGTTTCAGGTGGGCAGTTTGACTGGGGCG
GTCGCCTCCTAAAAGGTAACGGAGGCGTGCAAAGGTTCCCTCAGGCTGGACGGAAATCAG
CCGTAGAGTGTAAAGGCAGAAGGGAGCTTGACTGCAAGACCTACAAGTCGAGCAGGGGCG
AAAGCCGGCCTTAGTGATCCGACGGTTCCGTGTGGAAGGGCCGTCGCTCAACGGATAAAA
GTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGG
CACCTCGATGTCGGCTCATCGCAACCTGGGGCGGTAGTACGTCCCAAGGGTTGGGCTGTT
CGCCCATGAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATAT
CCGGTGTAGGCGTTAGAGTATTGAGGGCACTCATCCATAGTACGAGAGGACCTGGATGAA
CACACCTCTGGTGTATCGGTTATTCTGCCAAGGGTAAACGCCGAGTAGCCAAGTGTGGAA
ATGATAACCGCTGAAGCATCTAAGTGGGAAGCTTAGCCCAAGATGAGTACTCTCCATTAA
GCCACGGGAAGACAACCCGGTTGATAGGCACCAGGTGTACGCACGGTAACGTGTTTAGCC
GAGGTGTACTAATAGGCTGATCGAATTTGAC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_012978_117.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_012978_117 count=1; cluster_weight=1; cluster=RRNA23S_NC_012978_117; cluster_score=1.000000; cluster_center=True;
gtcaaaggacacaaggcgtagggtggatacctaggcacctagagacgaagaagggcgtggtaccgacgaaatgctccggggagctggaaacaagcgataatccggagattcccgaatagggcaacctcttgaactacctgctgaattcataggcaggaaagagacaacccagtgaactgaaacatcttagtagctggaggagaagaaagcaaaagcgattccctgagtagcggcgagcgaaaagggacaagcctaaaccagttttcgaactggggtcgtgggaaaacaaaaaaaaataatcgattgaaacgaagcagctgaatcctgcaccaaagatggtgaaagtccagtagttaaaaattgaaatcaacttgtttatcccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctaggtgaccgatagtgaaaaagtaccgtgagggaaaggtgaaaagaacccctgtaggggagtgaaaaagaacatgaaaccctacgctctcaaacagtgggaggataacaatatctgaccgcgtgcctgttgaagaatgagccggcgacttagaagaagtggcttggttaaggataactatccggagccagagcgaaagcaagtctgaatagggcgcttaaaggtcactttttctagacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaacaccacgtgaaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttatgaggctgtctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctgaatactagatatgctattcatgagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggccccaaaatggtcgttaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgcgccgaaaatgtccgggactaaacgacctgccgaagctgtgggatacttaattcacttggttccttttcaaaaatttcatttggtccaaaaactgggtttttgaaaagaaaaggaaaaggaacaaaaatgaaaaaaaataaagtatcggtaggggagcgttctgctgtagggtgaagcattgatgtaagttaatgtggacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgtaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggccaggccgaaaggcgtagccgatggaaaacaggttaatattcctgtactactttttgttggtatcgagggacggagcaggcagaggtaggccggatttggatttcggtggaaactttcaaggcgttgagagatagaagaaaaactatcttaagctaagaagtgatacgtttcaaaaactttgtttttgaaatctactggctgtcatacttccaagaaaagctcgcactactcacaagacaaaaagtacctgtaccgaaaaccgacacaggtaggttggtagagaataccaaggggcgcgagacaactctctctaaggaactcggcaaaatgaccccgtaacttcgggagaaggggtgccaagtaaaaacttggccgcagtgaccaggcccaggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagacaacatatgggggctgacgcctgcccagtgccggaaggttaaggaagttggttattcttgataaagaaaaagctaacgaccgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcgctgtctcggagagagactcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagcctgaaattgggttcgggttcttcttgcgcagactaggtgggaggcgttgaaagtttcttcttggggaaactggagccaacagtgagagaccactctggaggagctagaattctaatggtgttccttgaagcaggacacttgacagtttcaggtgggcagtttgactggggcggtcgcctcctaaaaggtaacggaggcgtgcaaaggttccctcaggctggacggaaatcagccgtagagtgtaaaggcagaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggttccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcatcgcaacctggggcggtagtacgtcccaagggttgggctgttcgcccatgaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtaggcgttagagtattgagggcactcatccatagtacgagaggacctggatgaacacacctctggtgtatcggttattctgccaagggtaaacgccgagtagccaagtgtggaaatgataaccgctgaagcatctaagtgggaagcttagcccaagatgagtactctccattaagccacgggaagacaacccggttgataggcaccaggtgtacgcacggtaacgtgtttagccgaggtgtactaataggctgatcgaatttgac

6
data/rrna/RRNA_23S/00001_RRNA23S_NC_013359_173.align.fasta Normal file
View File

@@ -0,0 +1,6 @@
>RRNA23S_NC_013359_173 count=1; cluster_weight=1; cluster=RRNA23S_NC_013359_173; cluster_score=1.000000; cluster_center=True;
TCCCACAACCCCTAGATCTTTCGACATAGTTTTAGACTGTTCCCGGTTCGTTCGCCACTA
CTTCGGGAATCGCTTTTGCTTTCTTTTCCTCCAGTTACTAAGATGTTTCAGTTCACTGGG
TAGCCTCTTACCTAATTATGAATTTATTCGGTAGTTTTATCAGATTGCCCTATTCGGGAA
TCTTCGGTTCTAACCTTGTTTCCAGCTCCGCGAAGCGTTTCGCCGGTAACTGCGCCCTTC
ATCGTCTCTGAGTGCCTAGGTCTCCTCCGTACGCCTTAATTC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_013359_173.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_013359_173 count=1; cluster_weight=1; cluster=RRNA23S_NC_013359_173; cluster_score=1.000000; cluster_center=True;
tcccacaacccctagatctttcgacatagttttagactgttcccggttcgttcgccactacttcgggaatcgcttttgctttcttttcctccagttactaagatgtttcagttcactgggtagcctcttacctaattatgaatttattcggtagttttatcagattgccctattcgggaatcttcggttctaaccttgtttccagctccgcgaagcgtttcgccggtaactgcgcccttcatcgtctctgagtgcctaggtctcctccgtacgccttaattc

2192
data/rrna/RRNA_23S/00001_RRNA23S_NC_013553_106.align.fasta Normal file
View File

File diff suppressed because it is too large Load Diff

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_013553_106.fasta Normal file
View File

File diff suppressed because one or more lines are too long

44
data/rrna/RRNA_23S/00001_RRNA23S_NC_013707_78.align.fasta Normal file
View File

@@ -0,0 +1,44 @@
>RRNA23S_NC_013707_78 count=1; cluster_weight=1; cluster=RRNA23S_NC_013707_78; cluster_score=1.000000; cluster_center=True;
CTACAGCCCCAGGTGGCGAAGAGCCGACATCGAGGTGCCAAACCTTCCCGTCGATGTGAG
CTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACGGCCC
TTCCACTCGGCACCGTCGGATCACTAAGGCCGACTTTCGTCCCTGCTCGACGGGTGGGTC
TTGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAGGGCCAATCTCCGTCCGGCCCGAGGA
AACCTTTGCACGCCTCCGTTACCTTTTGGGAGGCCTACGCCCCATAGAAACTGTCTACCT
GAGACTGTCCCTTGGCCCGTAGGTCCTGACACAAGGTTAGAATTCTAGCTCTTCCAGAGT
GGTATCTCACTGATGGCTCGGGCCCCCCCGGAAGGAGGCCTTCTTCGCCTTCCACCTAAG
CTGCGCAGGAAAGGCCCAAACCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCT
GTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCG
AGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTT
CGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTC
CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCA
TACATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGG
TCACTGCGACCCCCTTTGTGAGGAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGC
CGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGT
CGGTTTCGGGTACAGGTACCCTTTTGTTTAAAGGTCGTTCGAGCTTTTCCTGGGAGTATG
GCGTGGGTTACTTCAGCGCCGTAGCGCCTGGTGCTCGAACATTGGCTCGAGGCATTTTCT
CTACCCCTTCTTACCCTGAAAAAGCAGGGGCACCTTACGTTCTTGAACCGATAACCAGCT
TTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAGGGGTAGTACAGGAATATTC
ACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTG
GACGAACCTTGCGGAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGC
GTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCCACCACTGCTCGCGCGGGGGCTTCC
TTCTAAGGCGGAACGCTCCCCTACCGATGTATTTTTACATCCCACAGCTTCGGCAGATCG
CTTAGCCCCGTTCATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTT
CAAGGGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATC
ACTGAGCGATCATTTAGGGGCCTTAGCTGGTGATCTGGGCTGTTTCCCTCTCGACGATGA
AGCTTATCCCCCATCGTCTCACTGGCCGACCTTGACCCCTGTTATTTTGAGGTCATATCT
AGTATTCAGAGTTTGCCTCGATTTGGTACCGCTCTCGCGGCCCGCACCGAAACAGTGCTT
TACCCCTAGATGTCCAGTCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGC
TCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCA
GTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACC
CAGGTTCGGGTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTACGGCTC
CGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCA
CGCGGTCAGAGACCTGGCTCCTCCCACTGCTTGGGAGCTTACGGTTTCATATTCTATTTC
ACTCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACC
CAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGTCCC
ATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCTTTCGGCTACTGGACTTTCGCCATCT
AGGGTGCAGCATTCGTGCTGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCCCACAA
CCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGCTCGCCGCTACTACGGGAATCGCTTT
TGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCC
CATGGATTCAGCAGCAGTTCGAAAGGTTGCCCTATTCGGGAATCTCCGGATCTATGCTTA
TTTTCAACTCCCCGAAGCATTTCGTCGATTACTACGCCCTTCCTCGTCTCTGGGTGCCTA
GGTATCCACCGTAAGCCTTTCCTCGTTTGAA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_013707_78.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_013707_78 count=1; cluster_weight=1; cluster=RRNA23S_NC_013707_78; cluster_score=1.000000; cluster_center=True;
ctacagccccaggtggcgaagagccgacatcgaggtgccaaaccttcccgtcgatgtgagctcttggggaagatcagcctgttatccctagagtaacttttatccgttgagcgacggcccttccactcggcaccgtcggatcactaaggccgactttcgtccctgctcgacgggtgggtcttgcagtcaagctcccttctgcctttgcactcgagggccaatctccgtccggcccgaggaaacctttgcacgcctccgttaccttttgggaggcctacgccccatagaaactgtctacctgagactgtcccttggcccgtaggtcctgacacaaggttagaattctagctcttccagagtggtatctcactgatggctcgggcccccccggaaggaggccttcttcgccttccacctaagctgcgcaggaaaggcccaaacccaatcccagggaacagtgaagcttcatagggtctttctgtccaggtgcaggtagtccgcatcttcacagacatgtctatttcaccgagcctctctccgagacagtgcccagatcgttacgcctttcgtgcgggtcggaacttacccgacaaggaatttcgctaccttaggaccgttatagttacggccgccgttcaccggggcttcggtcgccggctcccctgtcatcaggtcaccaacttccttgaccttccggcactgggcaggcgtcagcccccatacatggtcttacgactttgcggagacctgtgtttttggtaaacagtcgcccgggcctggtcactgcgaccccctttgtgaggaggcaccccttctcccgaagttacggggctattttgccgagttccttagagagagttgtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaaggtcgttcgagcttttcctgggagtatggcgtgggttacttcagcgccgtagcgcctggtgctcgaacattggctcgaggcattttctctaccccttcttaccctgaaaaagcaggggcaccttacgttcttgaaccgataaccagctttcggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgcttcgtccaccactgctcgcgcgggggcttccttctaaggcggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactctttcaagggtggctgcttctaggcaaacctcctggctgtctctgcacccctacctcctttatcactgagcgatcatttaggggccttagctggtgatctgggctgtttccctctcgacgatgaagcttatcccccatcgtctcactggccgaccttgacccctgttattttgaggtcatatctagtattcagagtttgcctcgatttggtaccgctctcgcggcccgcaccgaaacagtgctttacccctagatgtccagtcaactgctgcgcctcaacgcatttcggggagaaccagctagctctgggttcgagtggcatttcacccctaaccacaactcatccgctgattcttcaacatcagtcggttcggacctccacttagtttcacccaagcttcatcctggtcatggatagatcacccaggttcgggtccataagcagtgacaattgccctatgaagactcgctttcgctacggctccggtgggttcccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagacctggctcctcccactgcttgggagcttacggtttcatattctatttcactccccgatgggggttcttttcacccttccctcacggtactacttcgctatcggtcacccaggagtatttagccttgcaaggtggtccttgctgattcacacgggattccacgtgtcccatgctactcgggtcagagcgtaagctagtgatgctttcggctactggactttcgccatctagggtgcagcattcgtgctgcttcgcctagcagcacgacgcttgtattgctctcccacaaccccgttttcacggtttaggctgctcccatttcgctcgccgctactacgggaatcgcttttgctttcttttcctctggctactaagatgtttcagttcgccaggttgtctcttgcctgcccatggattcagcagcagttcgaaaggttgccctattcgggaatctccggatctatgcttattttcaactccccgaagcatttcgtcgattactacgcccttcctcgtctctgggtgcctaggtatccaccgtaagcctttcctcgtttgaa

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_014346_472.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_014346_472 count=1; cluster_weight=1; cluster=RRNA23S_NC_014346_472; cluster_score=1.000000; cluster_center=True;
TTTTCTAGTGCTCGACGTCCTGTTGGACCCACACCAATCCATCCCGAACTTGGTAGTGAA
ATAATAGGAGGAAAAAGTAGCCCTGCAAGGGGTGCCTTGCGGAACTCTTTTTCTAGTGCT
AGGAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_014346_472.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_014346_472 count=1; cluster_weight=1; cluster=RRNA23S_NC_014346_472; cluster_score=1.000000; cluster_center=True;
ttttctagtgctcgacgtcctgttggacccacaccaatccatcccgaacttggtagtgaaataataggaggaaaaagtagccctgcaaggggtgccttgcggaactctttttctagtgctaggat

52
data/rrna/RRNA_23S/00001_RRNA23S_NC_014573_255.align.fasta Normal file
View File

@@ -0,0 +1,52 @@
>RRNA23S_NC_014573_255 count=1; cluster_weight=1; cluster=RRNA23S_NC_014573_255; cluster_score=1.000000; cluster_center=True;
TTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGATGAAGGGCGTAG
TAAGCGACGAAATGCTTCGGGGGTAGATCCGGAGATTCCCGAATAGGGCAACCTTTCAAA
CTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGC
CAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAACAGCCT
AAACCGTGAAAACGGGGTTGTGGGAGAGCAATAAACTACATAAGTATAAGGGAGGGATGC
AACACGATGTGAGTGGGGCAGGCAAGAAATACGTAAAGGACAATACAAGCGTCGTGCTGC
TAAGTTAAGCAGTTAGAATGCTGCACCCTAGATGGTGAGAGTCCAGTGGCTGAAGCATCA
CTAGCTTACGTACGCTCTGACCCGAGTAGCATGGGACACGTGGAATCCCGTGTGAATCAG
CAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGA
GGGAAGGGTGAAAAGGACCCCTAGCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCC
AAGCAGTGGGAGGAGACTACCCTAGTCTAGTTCTCCCCCGTTGCCTATGAGCGTCGCGAA
CTCATAGGCAACGGGGGAGAACTAGACTGGGGTAGGGCTTTGACCGCGTGCCTGTTGAAG
AATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAGCCCACCGGAGCCGTAGCGA
AAGCGAGTCTTCATGGGGCAAACAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCT
ATCCATGACCAGGATGAAGCTTGGATGAAACTAAGCGGAGGTCCGAACCGACTGATGTTG
AAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTG
GTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGATATCTAGGGGTAAAGCACTG
TTTCGGTGCGGGCCGCGCAAGCGGTACCAAATCGAGGCAAACTCTAAATACTAGATATGA
CCTTAAAAGACTCAAAAAAGAGAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGAT
AAGCTCCATCGTCGAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAAATGACCGC
TCAGTGATAAAGGAGGTGGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCTAC
CCTTGAAAGAGTGCGTAATAGCTCACTGATTGAGCGCTCTTGCGCCGAAGATGAACGGGG
CTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAATGCATCGGTAGGGGAGCGTTCCGCCT
TAGGGGGAAGTACCCGCGCGAGCGGCGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGA
GTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCCAAGGATTCCTTCGAAAGGT
TCGTCCACGAAGGGTGAGTCAGGACCTAAGATCAGGCCGAAAGGCGTAGTCAATGGACAA
CAGGTTTAACATTCCTGTACTACCCCTAGTTGGTCCCGAGGGACGGAGGAGGCTAGGTTA
GCCGAAAGGTGGTTATCGGTTCAAGGACCAAAGGTGCCCCCGTATGGGGGGGTAAGAAGG
GGCAGAGAAAATGCCTCGAGCCAACGTTCGCTTTGCTTGGTTCACTTGCTTTGGTTCTCC
TTGCATGGAGTATATATAGATTTTGCAATCTTTGGAATCTATATATAATATAGATAAAGT
GACTAAGTAAAGTAACCAATGCCATACTTCCAGGAAAAGCTCGAACGACCGTCAACAAAA
GGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGA
CAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCC
TAAGGAGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAA
AGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTG
GTGACCTGATGACAGGCGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATA
ACGGTCCTAAGGTAGCAAAATTCATTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAA
CGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGTCTGTGAAGATGCGG
ACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTT
GGGCCTTTCCTGCGCAGCTTAGGTGGAGGGCGAAGAAGGCCTCCTTCCGGGGGGGCACGA
GCCATCCGTGAGATACCACTCTGGAAGAGCTAGAATTCTAACCTTGTGTCAGAACCTACG
GGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAAC
GGAGGCGTGCAAAGGTTTCTTCGGGTCGGACGGAGATTGGCCCGCGAGTGCAAAGGCAGA
AGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCC
GACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGG
CTGATCTTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTC
GCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGT
GAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCA
TTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGT
TATCGTGCCCATGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCAT
CTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_014573_255.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_014573_255 count=1; cluster_weight=1; cluster=RRNA23S_NC_014573_255; cluster_score=1.000000; cluster_center=True;
ttcaaacgaagaaaggcttacggtggatacctaggcacccagagacgatgaagggcgtagtaagcgacgaaatgcttcgggggtagatccggagattcccgaatagggcaacctttcaaactgctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaataaactacataagtataagggagggatgcaacacgatgtgagtggggcaggcaagaaatacgtaaaggacaatacaagcgtcgtgctgctaagttaagcagttagaatgctgcaccctagatggtgagagtccagtggctgaagcatcactagcttacgtacgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaaggacccctagcggggagtgaaatagaacatgaaaccgtaagctcccaagcagtgggaggagactaccctagtctagttctcccccgttgcctatgagcgtcgcgaactcataggcaacgggggagaactagactggggtagggctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggagcccaccggagccgtagcgaaagcgagtcttcatggggcaaacaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggatatctaggggtaaagcactgtttcggtgcgggccgcgcaagcggtaccaaatcgaggcaaactctaaatactagatatgaccttaaaagactcaaaaaagagaacaggggtcaaggtcggccagtgagacgatgggggataagctccatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcagagacagccaggaggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgattgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagggggaagtacccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggattccttcgaaaggttcgtccacgaagggtgagtcaggacctaagatcaggccgaaaggcgtagtcaatggacaacaggtttaacattcctgtactacccctagttggtcccgagggacggaggaggctaggttagccgaaaggtggttatcggttcaaggaccaaaggtgcccccgtatgggggggtaagaaggggcagagaaaatgcctcgagccaacgttcgctttgcttggttcacttgctttggttctccttgcatggagtatatatagattttgcaatctttggaatctatatataatatagataaagtgactaagtaaagtaaccaatgccatacttccaggaaaagctcgaacgaccgtcaacaaaagggtacctgtacccgaaaccgacacaggtgggtaggtagagaatacctaggggcgcgagacaactctctctaaggaactcggcaaaatagccccgtaacttcgggagaaggggtgcctcctaaggaggtcgcagtgaccaggcccgggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagaccatgtatgggggctgacgcctgcccagtgccggaaggtcaaggaagttggtgacctgatgacaggcgagccggcgaccgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcaaaattcattgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagaggctcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccctgggattggctttgggcctttcctgcgcagcttaggtggagggcgaagaaggcctccttccgggggggcacgagccatccgtgagataccactctggaagagctagaattctaaccttgtgtcagaacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcttcgggtcggacggagattggcccgcgagtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggggctgtagtatgttccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtgggcgttagagcattgagaggacctttccctagtacgagaggaccgggaaggacgcacctctggtgtaccagttatcgtgcccatggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtagtaagcccaccccaagatgagtgctctcct

27
data/rrna/RRNA_23S/00001_RRNA23S_NC_014582_89.align.fasta Normal file
View File

@@ -0,0 +1,27 @@
>RRNA23S_NC_014582_89 count=1; cluster_weight=1; cluster=RRNA23S_NC_014582_89; cluster_score=1.000000; cluster_center=True;
GAGAAGAGAATGGAGGCCGATTTCATATATATCAATCATATTGAGATGGAGTCCGATTCA
TATTCATATGGAGTCATATGAATATGAATAGGAAGGTAAGGGGGGATAAGAAGGGGCAGA
GAAAATGCCTCGAGCCAATGTTCGAGTACCCGGCGCTGGCGCTACTGCGCTACGGCGCTA
CCGCGCTACTGCGCTAACGCGCTACCGCGCTACCGCGCTACTGCGCTAACGCGCTACCGC
GCTACCGCGCCGAAGTATAATAACCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTC
AACAAAGGGGTACCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGG
CGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCTGTAACTTCGGGAGAAGGGG
TGCCTCCTAAGGGAGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGT
CTCCGCAAAGTCGTAAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCTGAAGGTTAA
GGAAGTTGGTGACCTGATGACAGGGTAGCTCGCGACCGAAGCCCTGGTAAACGGCGGCTC
TAACTATAATGGTCCTAAGGTAGCAAAATTCATTGTCGGGTAAGTTCCGACCCGCACGAA
AGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGAAATGTCTGTGA
AGATGCGGACTACTTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGA
TTGATTTTGGGCCGATTTTTTTTTATTTGCTTTCCTGCGCAGCTTAGGTGGAAGGCGCGA
CTAAGGCCTCCTTCCGGGGGGGGCCCCAGCCATCAGTGAGATACCACTCTGGAAAAGCTC
GAATTCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCT
ATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGCGCAAAGGTTTCCTCGGGTCGGACA
GGGATTGGCCCGCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAG
CAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAAC
GGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGACCACATCGACGGGA
AGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGTGCTGTAGGGGGTTCCAAGGGTT
GGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCG
GTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACC
GGTCAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAA
GTGCGGAGCGGATAACTGCTGAAAGCATATGAAGCGGTAAGCCCACCCCAAGATGAGTGC
TCTCCA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_014582_89.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_014582_89 count=1; cluster_weight=1; cluster=RRNA23S_NC_014582_89; cluster_score=1.000000; cluster_center=True;
gagaagagaatggaggccgatttcatatatatcaatcatattgagatggagtccgattcatattcatatggagtcatatgaatatgaataggaaggtaaggggggataagaaggggcagagaaaatgcctcgagccaatgttcgagtacccggcgctggcgctactgcgctacggcgctaccgcgctactgcgctaacgcgctaccgcgctaccgcgctactgcgctaacgcgctaccgcgctaccgcgccgaagtataataaccatgccatactcccaggaaaagctcgaacgaccttcaacaaaggggtacctgtacccgaaaccgacacaggtgggtaggtagagaatacctaggggcgcgagacaactctctctaaggaactcggcaaaatagccctgtaacttcgggagaaggggtgcctcctaagggaggtcgcagtgaccaggcccgggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagaccatgtatgggggctgacgcctgcccagtgcctgaaggttaaggaagttggtgacctgatgacagggtagctcgcgaccgaagccctggtaaacggcggctctaactataatggtcctaaggtagcaaaattcattgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagaggctcggtgaaatagaaatgtctgtgaagatgcggactacttgcacctggacagaaagaccctatgaagcttcactgttccctgggattgattttgggccgatttttttttatttgctttcctgcgcagcttaggtggaaggcgcgactaaggcctccttccggggggggccccagccatcagtgagataccactctggaaaagctcgaattctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgcgcaaaggtttcctcgggtcggacagggattggcccgcgagtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagaccacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggtgctgtagggggttccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtgggcgttagagcattgagaggacctttccctagtacgagaggaccggtcaggacgcacctctggtgtaccagttatcgtgcccacggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatatgaagcggtaagcccaccccaagatgagtgctctcca

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_015359_63.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_015359_63 count=1; cluster_weight=1; cluster=RRNA23S_NC_015359_63; cluster_score=1.000000; cluster_center=True;
ATTTATGTCGTTACCTTGTATTCTTGCTTGCATGGAACCACCTTATCCATCCCGAACTAA
GAAGTGAAACGTGTAAGGGGCGACAATACTTGAGGGGAGGCCCTCTGGAAAGATAGTCTA
ATGCAAGGTACTTTCAAAAATATACGATCC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_015359_63.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_015359_63 count=1; cluster_weight=1; cluster=RRNA23S_NC_015359_63; cluster_score=1.000000; cluster_center=True;
atttatgtcgttaccttgtattcttgcttgcatggaaccaccttatccatcccgaactaagaagtgaaacgtgtaaggggcgacaatacttgaggggaggccctctggaaagatagtctaatgcaaggtactttcaaaaatatacgatcc

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_015645_461.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_015645_461 count=1; cluster_weight=1; cluster=RRNA23S_NC_015645_461; cluster_score=1.000000; cluster_center=True;
TTCTCGGTGCCCACGTTCAATAGGACCCACGTCAATCCATCCCGAACTTGATAGTGAAAC
TGTTGAAGAGATTGTAAAGCTGCAAGGGGGGCTTTGTGGATTTACAATCTTGGTGCCGGG
AA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_015645_461.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_015645_461 count=1; cluster_weight=1; cluster=RRNA23S_NC_015645_461; cluster_score=1.000000; cluster_center=True;
ttctcggtgcccacgttcaataggacccacgtcaatccatcccgaacttgatagtgaaactgttgaagagattgtaaagctgcaaggggggctttgtggatttacaatcttggtgccgggaa

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_016732_61.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_016732_61 count=1; cluster_weight=1; cluster=RRNA23S_NC_016732_61; cluster_score=1.000000; cluster_center=True;
ATGGAGCTCAAGCTTTTCTTGGAAGCATGACATCACTGACGACAACAACCCCGAAGGATT
GTCATCGGGATAACGCCTCAGCTCAAGTTTAGTTTTTCTTCTAACTCTCAACACCTTGAC
GCTTCCACTATAATCCATTAGTAGTCTCAGTTTAGCCTTCTTCGTCCCTTGTTCCCAATA
GAATCAGTACAGGAATATTAACCTGTTTTCCATCGACGACGCCTTTCGGCCTAGCCTTAG
GACCTGACTAACCCCCCATGGACGAACCTAGTGGAGGAACCCAACGGTTTTCGGGGCATT
GGATTCTCACCAATGTTTTCGTTACTCAAGCCAACAATCTCACTTCTGTTTTGTCCATTC
TGGTTTACACCATAACTTCACCCAATAACAGAACGCTCCCCTACCGATTCTTATATAAGA
ATCTCACAGCTTCGGCAGGTTTCTTAGTCCCGGCCATTATCGGCGCAAGAACGCTTTACC
AGTGAGCTATTACGCACTCTTTCAAGGGATAGCTGCTTCTACAATTTGTTATAATCTCTA
AATTAAAATAATTTATTTTAATAATTTCACTGAATTTGACGGTCAGAAATTAAATTTTCC
ATAAGCTTTTCGTAATCTCTTGAAAACGTTTGCTCAGAACGTTTTCCTTTATCAGGATTA
CAAAAATAGGCTTTGCGCACATAAGATCGAAATAGCTGTGCATCTTTAAAAGTGTTTGGA
TTAGAATGTAATCCACAAACCTCAATAAAATTTGAAACTTTGTTGGCTATTACATCAGGA
AGGTGAAGTTGTTTGTCTTTAAAGAAAGGAATAACAACTTCTTTAGCTCTTGCCCAACCT
TTAGCGTGAATATAACCACAATTTTGATTATTCATTGGCTGATACCCAGAGAAGTTGTAT
TGTTTTGCAATACACTCTAAAAGGGGTTTAGCTAATAAATCATCAGAAATAGTCCAACGT
GGATCAATTTTTATGTTTTGTCTGCCACCAGCTAAACGACGTTTATGAAAATTAAAGCTA
AGACTGCCATCAGCTACATGATAGTATGCAACATAATCTGCACAAATTTGAATTTTATTA
TTTTCTAAATTTGATACAAGATCATTAACCTCCATAGAAATAGGAAGTAAAAGTTCGTTA
CCTAATCTTTCTGCTGAACTTATTTCGTCTGGAGTTGCATTAACATGCTCGTGATAATGT
GAAATTGGGAGAGTTTTTTTTGTTTCTCGTGATGCGGAACGTTGATAACGTAACCATAAT
AGTGTTAAAAACTCTATACGTTCACGTTCTTCGTAAGGCTTATTTTGTAATAAATAAGCT
GATTCTGATTCAAATGGTATGTAACGCTCCGTTTGATATTGATAAATTAATAAAGCTATT
AGAAAATCTTTTAAAGTTCCAGGATTAACTGGTTTATTTTTTAGATACATTTGAATAAAT
CTTTTACCAATATCACTGTTAAAAGGAAACACAAACCACGAAGCGTCAGTT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_016732_61.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_016732_61 count=1; cluster_weight=1; cluster=RRNA23S_NC_016732_61; cluster_score=1.000000; cluster_center=True;
atggagctcaagcttttcttggaagcatgacatcactgacgacaacaaccccgaaggattgtcatcgggataacgcctcagctcaagtttagtttttcttctaactctcaacaccttgacgcttccactataatccattagtagtctcagtttagccttcttcgtcccttgttcccaatagaatcagtacaggaatattaacctgttttccatcgacgacgcctttcggcctagccttaggacctgactaaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggattctcaccaatgttttcgttactcaagccaacaatctcacttctgttttgtccattctggtttacaccataacttcacccaataacagaacgctcccctaccgattcttatataagaatctcacagcttcggcaggtttcttagtcccggccattatcggcgcaagaacgctttaccagtgagctattacgcactctttcaagggatagctgcttctacaatttgttataatctctaaattaaaataatttattttaataatttcactgaatttgacggtcagaaattaaattttccataagcttttcgtaatctcttgaaaacgtttgctcagaacgttttcctttatcaggattacaaaaataggctttgcgcacataagatcgaaatagctgtgcatctttaaaagtgtttggattagaatgtaatccacaaacctcaataaaatttgaaactttgttggctattacatcaggaaggtgaagttgtttgtctttaaagaaaggaataacaacttctttagctcttgcccaacctttagcgtgaatataaccacaattttgattattcattggctgatacccagagaagttgtattgttttgcaatacactctaaaaggggtttagctaataaatcatcagaaatagtccaacgtggatcaatttttatgttttgtctgccaccagctaaacgacgtttatgaaaattaaagctaagactgccatcagctacatgatagtatgcaacataatctgcacaaatttgaattttattattttctaaatttgatacaagatcattaacctccatagaaataggaagtaaaagttcgttacctaatctttctgctgaacttatttcgtctggagttgcattaacatgctcgtgataatgtgaaattgggagagttttttttgtttctcgtgatgcggaacgttgataacgtaaccataatagtgttaaaaactctatacgttcacgttcttcgtaaggcttattttgtaataaataagctgattctgattcaaatggtatgtaacgctccgtttgatattgataaattaataaagctattagaaaatcttttaaagttccaggattaactggtttattttttagatacatttgaataaatcttttaccaatatcactgttaaaaggaaacacaaaccacgaagcgtcagtt

15
data/rrna/RRNA_23S/00001_RRNA23S_NC_016734_459.align.fasta Normal file
View File

@@ -0,0 +1,15 @@
>RRNA23S_NC_016734_459 count=1; cluster_weight=1; cluster=RRNA23S_NC_016734_459; cluster_score=1.000000; cluster_center=True;
TTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAA
ATAGACATGTCTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCT
TCACTGTTCCCTGGGATTGGCTTTGGGCTTTTCCTGCGCAGCTTAGGTGGAAGGCGAAGA
AGGCCTCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAAT
TCTAACCTTGTGTCAGGACCTACGGGCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGG
GGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGA
TTGGCCCTCGAGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGG
GACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGAT
AAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGCTCACATCGACGGGAAGGT
TTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGC
TGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCC
ATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTACGAGAGGACCGGGA
AGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGC
GGAGCGGATAACTGCTGAAAGCATCTAAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_016734_459.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_016734_459 count=1; cluster_weight=1; cluster=RRNA23S_NC_016734_459; cluster_score=1.000000; cluster_center=True;
ttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagaggctcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttcactgttccctgggattggctttgggcttttcctgcgcagcttaggtggaaggcgaagaaggcctccttccgggggggcccgagccatcagtgagataccactctggaagagctagaattctaaccttgtgtcaggacctacgggccaagggacagtctcaggtagacagtttctatggggcgtaggcctcccaaaaggtaacggaggcgtgcaaaggtttcctcgggccggacggagattggccctcgagtgcaaaggcagaagggagcttgactgcaagacccacccgtcgagcagggacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagctcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggggctgtagtatgttccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagttcggtccatatccggtgtgggcgttagagcattgagaggacctttccctagtacgagaggaccgggaaggacgcacctctggtgtaccagttatcgtgcccacggtaaacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtagtaagcccaccccaagatgagtgctctcc

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_020361_471.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_020361_471 count=1; cluster_weight=1; cluster=RRNA23S_NC_020361_471; cluster_score=1.000000; cluster_center=True;
TTTTCCTTGAGTAAACCAGGAATTTATACGCCCGGAATGAGTCCTAATTCCTCGAGTACA
AATGTGTAAGAGAAATAGTGTACTGACTAGGTCAATTTATTCCATGAGTCAGGAGAGCGA
TCGGGCTGCCAAGATAAAAGAATTTCATCTTTCATTATGACGAATGAGATCTTTGGATAG
AAGATCTCAGATTGAGATTTGCTATTCTGTCCCAACTAGATCGCACCATGTAACATTTTA
CAATCCAAGAAGTTTTTCTAGGAACATAGGCGAGGTAATCCTGAAATGTTTGAATTCCAA
AGAGACGCAAACAAGCATAGATCTTGGCAGCAATGCTTTTTATACCCACTCTTTTTTCAG
CAAGATCTTTATGCAATTGCTCATGATCATCATTCAGATAGAGCAAATTGCTCTGAACCC
TCGGAAATTCGGATTTCCAATGAGTTTAGTTTTCTAACTGTAAAACGTTCGATTAATCGC
ATACGTAAATTAAAAGATTCAATTTTTTTATTTGGGAATTTCCATCCAAATCAATGGATG
GATCACAATAGGAATTCTTATTCCTTCTTGATATTAGAAGGCTTTACTGTAGTCTTGGAA
GTTTCATTCTCAATACGAGCCAAATATTCTAAATGTATGAATGGATGCAAAAGTTTCCGA
TCCATCCATGGTCTATTCCCTCTTATAGAAGATAAATTTCCACATTCAAATTATATATCA
GATATACGACTACCTTACGCTATTCATCCAGAAATTTTGGTTCGAATCTTTCGTCGCTGG
ATCCGAGACGCTCCTTGTTTGCATCTATTGCGATGCATTCTATATGAATGTCGAAATAGT
TTGAGTTCCGAGAATTCGCAAAAAGCAATTTTTGTTAGCCTGAAAGAGAATAAAAAATTC
TATCTGTTCTTGTGGAATTCTTATGTTTGTGAATGTGAATCCATTCTAGTTCCCCTTATG
AAGCGATTTTCTCATTCACAATTGTTGTCCTATGGATCTCTTCCCGAACGAACCCATTTT
GATCGAAAAATCAAGCATATTCTCATATTTCGTTGTACAATTTCAACGAAAAGGATCTGG
TTCTTAAAGGATCCTTTATTTCACTATGTGAGATATCGAGAAAGATCCCTCGTAGCGCTG
AAGGGTAGCGCACTTCAAGAGAAAAAATGGAAATATCATCTTCTCCACTTTTGGCTACGT
TATTCCCATCTTTGGCCCCAACCATATAGGGTATGGATTTTCGAATTACCCAGGAATTGT
TTTTCTTTTCTCGGGTTCTCTCTGAGTATAAAAATGAAATATCTCGCGGTTAGAACAAAA
ATGCTAGATAATTCATTCATTACTGACCTCATTACCAATGAAATTCATCCAATAGCTCCA
ATTAGATCAATCATTTCTTTCTTGGCTAAAGAAAGGTTCTGTGACATCTTTGGTCGGCCA
ATTAGTAAATTTGCCTGGGCCAGTCTGACAGATGACGATATCCTCGATCGAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_020361_471.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_020361_471 count=1; cluster_weight=1; cluster=RRNA23S_NC_020361_471; cluster_score=1.000000; cluster_center=True;
ttttccttgagtaaaccaggaatttatacgcccggaatgagtcctaattcctcgagtacaaatgtgtaagagaaatagtgtactgactaggtcaatttattccatgagtcaggagagcgatcgggctgccaagataaaagaatttcatctttcattatgacgaatgagatctttggatagaagatctcagattgagatttgctattctgtcccaactagatcgcaccatgtaacattttacaatccaagaagtttttctaggaacataggcgaggtaatcctgaaatgtttgaattccaaagagacgcaaacaagcatagatcttggcagcaatgctttttatacccactcttttttcagcaagatctttatgcaattgctcatgatcatcattcagatagagcaaattgctctgaaccctcggaaattcggatttccaatgagtttagttttctaactgtaaaacgttcgattaatcgcatacgtaaattaaaagattcaatttttttatttgggaatttccatccaaatcaatggatggatcacaataggaattcttattccttcttgatattagaaggctttactgtagtcttggaagtttcattctcaatacgagccaaatattctaaatgtatgaatggatgcaaaagtttccgatccatccatggtctattccctcttatagaagataaatttccacattcaaattatatatcagatatacgactaccttacgctattcatccagaaattttggttcgaatctttcgtcgctggatccgagacgctccttgtttgcatctattgcgatgcattctatatgaatgtcgaaatagtttgagttccgagaattcgcaaaaagcaatttttgttagcctgaaagagaataaaaaattctatctgttcttgtggaattcttatgtttgtgaatgtgaatccattctagttccccttatgaagcgattttctcattcacaattgttgtcctatggatctcttcccgaacgaacccattttgatcgaaaaatcaagcatattctcatatttcgttgtacaatttcaacgaaaaggatctggttcttaaaggatcctttatttcactatgtgagatatcgagaaagatccctcgtagcgctgaagggtagcgcacttcaagagaaaaaatggaaatatcatcttctccacttttggctacgttattcccatctttggccccaaccatatagggtatggattttcgaattacccaggaattgtttttcttttctcgggttctctctgagtataaaaatgaaatatctcgcggttagaacaaaaatgctagataattcattcattactgacctcattaccaatgaaattcatccaatagctccaattagatcaatcatttctttcttggctaaagaaaggttctgtgacatctttggtcggccaattagtaaatttgcctgggccagtctgacagatgacgatatcctcgatcgat

44
data/rrna/RRNA_23S/00001_RRNA23S_NC_020438_505.align.fasta Normal file
View File

@@ -0,0 +1,44 @@
>RRNA23S_NC_020438_505 count=1; cluster_weight=1; cluster=RRNA23S_NC_020438_505; cluster_score=1.000000; cluster_center=True;
AATCCCGAGTAGCATGGGGCACGTGAAATCCCGTGTGAATCAGCGAGGACCACCTCGTAA
GGCTAAATACTCCTGAGTGACCGATAGCGAAATAGTACCACGAGGGAACGGTGAAAAGAA
CCCCTGTTGGGGAGTGAAATAGAACATGAAACCGTATGCTGACAAGCAGTGGGAGCAAGA
TAAAGCTTGTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTATAGGGAGTGGCTGG
GTTAAGGAGTAAAATCCGGAGCCCAAGCGAAAGCGAGTCTGAATAGGGCGTAAATGGTCA
CTTCTTATGGACCCGAACCCGGGTGATCTATTCATGGCCAGGATGAAGCTTGGGTAACAC
CAAGTGGAGGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGAGCTGTGAATAGGGGA
GAAATTCCAATCGAACTCGGAGCTAGCTGGATCTCCCCGAAATGCGTTGAGGCGCAGCGG
TAACGATGAACAATCTTGGGGTAAAGCTACTGTTTCGATGCGGGCTGCGAAAGTGGTACC
AAGTCGTGGCAAACTCAGAATACAAGATATGTCTTCCGTAAACCAGTGAGACAGTGGGAG
ATAAGTTTCATTGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAAATGGTC
ACTAAGTGGAAAAGGATGTGAGAATGCTGAAACAACCAGGAGGTTTGCTTAGAAGCAGCC
ACCCTTCAAAGAGTGCGTAATAGCTCACTGGTAAAGCGTTCTTGCGCCGATAATGGCCGG
GACTAAGTGACCTGCCGAAGCTGTGATATAATTTATTTAGGCAAAAAAATGGCCTTTAAA
GAAATTATAGGTAGGGGAGCGTTCCGCTCTCGGGTGAAGTTTTCACGTAAGTGGGGATGG
ACGAAGCGGAAGTGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCC
CCGAAAACCTAAGGGTTCCTCCACTAGGTTCGTCCATGGGGGGTTAGTCAGGTCCTAAGA
CTAGGCCAAAAGGCGTCGTCGATGGAAAACAGGTTAATATTCCTGTACTAATTAAAGTAT
GATCTGAGGGACGAAGGAGGCTAAACTAGAACTGTTTTTGGATTGCAGTGGAAGCGTTTA
GACGTTGAGAGATAGAACAAAAGCTATCTTGAGTGGAGACGTAATCCCTATTTGATGGTT
CGCCGTCGAGTAGCTAGTGATGTCATACTTCCAAGAAAAGCTCATACATCTTTATACTTT
AATTACCTGTACCTGAAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGA
GAACTCTCTCTAAGGAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCCTC
TTAAAAGGGGGGTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCC
GCAAAGTCGTAAGACAATATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAA
GTTGGTTATTTCGTAAGAAAAAAGCTGACGACCGAAGCCCCGGTGAACGGCGGTCGTAAC
TATAACGATCCTAAGGTAGCGAAATTCATTGTCGAGTAAGTTTCGACCTGCACGAAAGGC
GTAACGATCTGGGCGCTGTCTCGGAGAGAGGCTCGGTGAAATAGACTTGTCCCGTGAAGA
TGCGGACTACCTACACCTGGACAGAAAGACCCTATGAAGCTTGACTGTATCTTGGAATTG
GGTTTGGGCTTTTCTTGCGCAGCCTAGGTGGGAGGCTATGAAGATTACCTTCCGGGGTAT
TTGGAGCCGTCATTGAGAGACCACTCTGGAAGAGCTAGAATCCTAATGGGGATCCTTGAA
TCAGGACCCTTGACAGTTTCAGGTGGGCAGTTTATTTGGGGCGAATGCCTCCTAAAAGGT
AACGGAGGCGTGCAAAGGTTCCCTCAGTCTGGACGGAAATCAGACATTGAGTGTAAAGGC
AAAAGGGAGCTTGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGA
TCCGACGGTGCCGTGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAAC
AGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTC
ATCACATCCTCGGTCTGTAGTAGGTCCGAAGGGTTGGGCTGTTCGCCCATTAAAGTGGTA
CGTGAGCTGGGTTCAAAACGTCGTGAGACAGTTTGGTCCATATCCGGTGTAGGCGCTAGA
GCATTGAGAGTAGCCTTTCATAGTACGAGAGGACCTGAAAGGACATGCCAATTGTGTACC
AGTTCTCATTCCAATGGGAAACGCTGGGTAGCTACGCATGGATAGATAACTGCTGAAAGC
ATCTAAGTAGGAAGCTAAACTCAAGATGAGTGCTCTCTAAGGCCGCGGCTAGACAAGCCG
TTATATAGGTATCAGGTGTACAGTCAGCAATGGCTTCAGCCGAGATATACTAAAGGCCGT
TTGATTTTGACCTT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_020438_505.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_020438_505 count=1; cluster_weight=1; cluster=RRNA23S_NC_020438_505; cluster_score=1.000000; cluster_center=True;
aatcccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgagtgaccgatagcgaaatagtaccacgagggaacggtgaaaagaacccctgttggggagtgaaatagaacatgaaaccgtatgctgacaagcagtgggagcaagataaagcttgtgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaaggagtaaaatccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccgaacccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacgatgaacaatcttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaatacaagatatgtcttccgtaaaccagtgagacagtgggagataagtttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccgggactaagtgacctgccgaagctgtgatataatttatttaggcaaaaaaatggcctttaaagaaattataggtaggggagcgttccgctctcgggtgaagttttcacgtaagtggggatggacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggtcctaagactaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtactaattaaagtatgatctgagggacgaaggaggctaaactagaactgtttttggattgcagtggaagcgtttagacgttgagagatagaacaaaagctatcttgagtggagacgtaatccctatttgatggttcgccgtcgagtagctagtgatgtcatacttccaagaaaagctcatacatctttatactttaattacctgtacctgaaaccgacacaggtaggttggtagagaataccaaggggcgcgagagaactctctctaaggaactcggcaaactggccccgtaacttcggaagaaggggcgccctcttaaaaggggggtcgcagtgaccaggcccaggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagacaatatatgggggctgacgcctgcccagtgccggaaggttaaggaagttggttatttcgtaagaaaaaagctgacgaccgaagccccggtgaacggcggtcgtaactataacgatcctaaggtagcgaaattcattgtcgagtaagtttcgacctgcacgaaaggcgtaacgatctgggcgctgtctcggagagaggctcggtgaaatagacttgtcccgtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcttggaattgggtttgggcttttcttgcgcagcctaggtgggaggctatgaagattaccttccggggtatttggagccgtcattgagagaccactctggaagagctagaatcctaatggggatccttgaatcaggacccttgacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgtgcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcatcacatcctcggtctgtagtaggtccgaagggttgggctgttcgcccattaaagtggtacgtgagctgggttcaaaacgtcgtgagacagtttggtccatatccggtgtaggcgctagagcattgagagtagcctttcatagtacgagaggacctgaaaggacatgccaattgtgtaccagttctcattccaatgggaaacgctgggtagctacgcatggatagataactgctgaaagcatctaagtaggaagctaaactcaagatgagtgctctctaaggccgcggctagacaagccgttatataggtatcaggtgtacagtcagcaatggcttcagccgagatatactaaaggccgtttgattttgacctt

53
data/rrna/RRNA_23S/00001_RRNA23S_NC_021109_129.align.fasta Normal file
View File

@@ -0,0 +1,53 @@
>RRNA23S_NC_021109_129 count=1; cluster_weight=1; cluster=RRNA23S_NC_021109_129; cluster_score=1.000000; cluster_center=True;
TATATTTGTGACTTAAGGTCAAATGAACTAAGGCGTACGGTGGAGACCTAGGCACTCAGA
GACGAAGAAGGGCGCAGATACCGGCGATACGCTTCGGGGAGCTGGCAACAAGCTTAGATC
CGAAGATTCCCGAATAGGGCAACCTCATAGAACTACCTATATAATTCATAGTTAGGTACG
AGGCAACCCAGTGAACTGAAACATCTAAGTAGCTGGAGGAAAAGAAAGCAAACGCGATTC
CCGTAGTAGCGGCGAGCGAACTGGGAACAGCCTAAACCTACACCGCAAGGTGTAGGGGTT
GTGGGAGGACAACGTCTACGCTTTTCCATTTTTATGTTTTTTAAAAAACATAAAAATTGA
GAAGCTGTTGACTATTTATATATTATTTTTTAATACGAAGCAGCTGAATCCTGCACCATA
GATGGTGAAAGTCCAGTAGTAAAAAGAAAATTCTATTTTTGTCTAATGTAGCTCAAAGTA
GTAACGGCATTAGGTCGCTGAGTTACAATGTCTAATGGAGTCACGGCGCAGCCTAAACTC
CATTGGATATCCCAAGTAGCATGGGGCACGTGAAATCCCGTGTGAATCCGCGAGGACCAC
CTCGTAAGGCTAAATACTCCTGAGTGACCGATAGTGAAATAGTACCGTCAGGGAAAGGTG
AAAAGAACCCCTGTTGGGGAGTGAAATAGAACATGAAACCGTATGCTGACAAGCAGTGGG
AGCAAGTAGGCTTGTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTATAGGAAGTG
GCTGGGTTAAGGAGTAAAATCCGGAGCCCAAGCGAAAGCGAGTCTGAATAGGGCATTGTG
TGGTCACTTCTTATGGACCCGAACCCGGGTGATCTATTCATGACCAGGATGAAGCTTGGG
TAACACCAAGTGGAGGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGAGTTGCGAAT
AGCGGAGAAATTCCAATCGAACTCGGAGCTAGCTGGATCTCCCCGAAATGCGTTGAGGCG
CAGCGGTAACGATGAACTATCTTGGGGTAAAGCTACTGTTTCGATGCGGGCTGCGAAAGT
GGTACCAAGTCGTGGCAAACTCAGAATACAAGATATGTCTTCCGTGAACCAGTGAGACAG
TGGGGGATAAGCTTCATTGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAA
ATGGTCACTAAGTGGAAAAGGATGTGAGAATGCTGAAACAACCAGGAGGTTTGCTTAGAA
GCAGCCACCCTTCAAAGAGTGCGTAATAGCTCACTGGTAAAGCGTTCTTGCGCCGATAAT
GGCCGGGACTAAGTGACCTGCCGAAGCTGTGGTATAATTTATTTAGAGTAAATTATAGGT
AGGGGAGCGTTCCGCTCTCGGGTGAAGTTTTCACGTAAGTGGGGATGGACGAAGCGGAAG
TGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAA
GGGTTCCTCCACTAGGTTCGTCCATGGGGGGTTAGTCAGGGCCTAAGACCAGGCCAAAAG
GCGTCGTCGATGGAAAACAGGTTAATATTCCTGTACGAATTCAATTATGATCTGAGGGAC
GAAGGAGGCTAAACTAGAACTGTTTTTGGATTGCAGTGGAAGCGTTTAGACGTTGAGAGA
TAGCATAAAAGCTATCTTGAGTGGAGACGTGATCCCTATATGGTGGTTCGCTATCGTGTA
GCTAGTGATGTCATACTTCCAAGAAAAGCTCATACATCTTTATAATTAAATTCCCTGTAC
CTGAAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGAGAACTCTCTCTA
AGGAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCCAAAATTTATTTTTT
GGGTCGCAGTGACCCGGCTCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCG
TAAGACAATATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAAGTTGGTTAT
TTCGTAAGAAAAAAGCTGACGACCGAAGCCCCGGTGAACGGCGGTCGTAACTATAACGAT
CCTAAGGTAGCGAAATTCATTGTCGAGTAAGTTTCGACCTGCACGAAAGGCGTAACGATC
TGAGCGCTGTCTCAGAGAGAGGCTCGGTGAAATAGACTTGTCCCGTGAAGATGCGGACTA
CCTACACCTGGACAGAAAGACCCTATGAAGCTTGACTGTATCTTGGAATTGGGTTTGGGC
TTTTCTTGCGCAGCCTAGGTGGGAGGCTATGAAGATTACCTTCCGGGGTAATTAGAGCCG
TCATTGAGAGACCACTCTGGGAGAGCTAGAATCCTAATGGGGTTCCTTGAATCAGGACCC
TTGACAGTTTCAGGTGGGCAGTTTATTTGGGGCGAATGCCTCCTAAAAGGTAACGGAGGC
GTGCAAAGGTTCCCTCAGTCTGGACGGAAATCAGACATTGAGTGTAAAGGCAAAAGGGAG
CTTGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGT
GCCGTGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATC
TTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCATCACATCC
TCGGTCTGTAGTAGGTCCGAAGGGTTGGGCTGTTCGCCCATTAAAGTGGTACGTGAGCTG
GGTTCAAAACGTCGTGAGACAGTTTGGTCCATATCCGGTGTAGGCGCTAGAGCATTGAGA
GTAGCCTTTCATAGTACGAGAGGACCTGAAAGGACGTGCCAATTGTGTACCAGTTCTTGC
TCCAGCAGGAAACGCTGGGTAGCTACGCACGGATAGATAACCGCTGAAAGCATCTAAGTG
GGAAGCTAAACTCAAGATGAGTGCTCTCTAAGGCCACAGCTAGACAAGCTGATTGATAGG
TATCAGGTGTACAGTCAGCAATGGCTTCAGCCGAGATATACTAAAGGCCGTTTGATTTTG
ACCTT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_021109_129.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_021109_129 count=1; cluster_weight=1; cluster=RRNA23S_NC_021109_129; cluster_score=1.000000; cluster_center=True;
tatatttgtgacttaaggtcaaatgaactaaggcgtacggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggggagctggcaacaagcttagatccgaagattcccgaatagggcaacctcatagaactacctatataattcatagttaggtacgaggcaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgagcgaactgggaacagcctaaacctacaccgcaaggtgtaggggttgtgggaggacaacgtctacgcttttccatttttatgttttttaaaaaacataaaaattgagaagctgttgactatttatatattattttttaatacgaagcagctgaatcctgcaccatagatggtgaaagtccagtagtaaaaagaaaattctatttttgtctaatgtagctcaaagtagtaacggcattaggtcgctgagttacaatgtctaatggagtcacggcgcagcctaaactccattggatatcccaagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggctaaatactcctgagtgaccgatagtgaaatagtaccgtcagggaaaggtgaaaagaacccctgttggggagtgaaatagaacatgaaaccgtatgctgacaagcagtgggagcaagtaggcttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaaggagtaaaatccggagcccaagcgaaagcgagtctgaatagggcattgtgtggtcacttcttatggacccgaacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgcgaatagcggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacgatgaactatcttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaatacaagatatgtcttccgtgaaccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccgggactaagtgacctgccgaagctgtggtataatttatttagagtaaattataggtaggggagcgttccgctctcgggtgaagttttcacgtaagtggggatggacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcagggcctaagaccaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacgaattcaattatgatctgagggacgaaggaggctaaactagaactgtttttggattgcagtggaagcgtttagacgttgagagatagcataaaagctatcttgagtggagacgtgatccctatatggtggttcgctatcgtgtagctagtgatgtcatacttccaagaaaagctcatacatctttataattaaattccctgtacctgaaaccgacacaggtaggttggtagagaataccaaggggcgcgagagaactctctctaaggaactcggcaaactggccccgtaacttcggaagaaggggcgcccaaaatttattttttgggtcgcagtgacccggctcaggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagacaatatatgggggctgacgcctgcccagtgccggaaggttaaggaagttggttatttcgtaagaaaaaagctgacgaccgaagccccggtgaacggcggtcgtaactataacgatcctaaggtagcgaaattcattgtcgagtaagtttcgacctgcacgaaaggcgtaacgatctgagcgctgtctcagagagaggctcggtgaaatagacttgtcccgtgaagatgcggactacctacacctggacagaaagaccctatgaagcttgactgtatcttggaattgggtttgggcttttcttgcgcagcctaggtgggaggctatgaagattaccttccggggtaattagagccgtcattgagagaccactctgggagagctagaatcctaatggggttccttgaatcaggacccttgacagtttcaggtgggcagtttatttggggcgaatgcctcctaaaaggtaacggaggcgtgcaaaggttccctcagtctggacggaaatcagacattgagtgtaaaggcaaaagggagcttgactgcaagacctacaagtcgagcaggggcgaaagccggccttagtgatccgacggtgccgtgtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcatcacatcctcggtctgtagtaggtccgaagggttgggctgttcgcccattaaagtggtacgtgagctgggttcaaaacgtcgtgagacagtttggtccatatccggtgtaggcgctagagcattgagagtagcctttcatagtacgagaggacctgaaaggacgtgccaattgtgtaccagttcttgctccagcaggaaacgctgggtagctacgcacggatagataaccgctgaaagcatctaagtgggaagctaaactcaagatgagtgctctctaaggccacagctagacaagctgattgataggtatcaggtgtacagtcagcaatggcttcagccgagatatactaaaggccgtttgattttgacctt

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_021441_194.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_021441_194 count=1; cluster_weight=1; cluster=RRNA23S_NC_021441_194; cluster_score=1.000000; cluster_center=True;
TGTATATACATACATAGGATTACCTACCAATGGAAACTGCAACCTTAGTCGCTATCTCCA
TATCTTGTTTACTTGTTAGCTTTACTGGTTATGCCCTATACACCGCCTTTGGGCAACCTT
C

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_021441_194.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_021441_194 count=1; cluster_weight=1; cluster=RRNA23S_NC_021441_194; cluster_score=1.000000; cluster_center=True;
tgtatatacatacataggattacctaccaatggaaactgcaaccttagtcgctatctccatatcttgtttacttgttagctttactggttatgccctatacaccgcctttgggcaaccttc

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_022668_490.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_022668_490 count=1; cluster_weight=1; cluster=RRNA23S_NC_022668_490; cluster_score=1.000000; cluster_center=True;
AAAGGAGGTGATCCAGCCGCACCTTCCAGTACGGCTACCTTGTTACGACTTCACTCCAGT
CGCAAGCCTAGCCTTAGGCATCCCCCTCCTTACGGTTAAGGGTAATGACTTCAAACATGG
CCAGCTCCTATAGTGTGACGGGCGGTGTGTACAAGGCCCGGGAACGGATTCACCGCCGTA
TGGCTGACCGGCGATTACTAGCGATTCCTGCTTCATGCAGGCGAGTTGCAGCCTGCAATC
CGAACTGAGGACGGGTTTTTGGAGTTAGCTCACCCTCGCGAGATCGCGACCCTTTGTCCC
GCCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCATGATGACTTGGCCTCATCCT
CTCCTTCCTCCGGCTTAACACCGGCGGTCTGTTCAGGGTTCCAAACTCATAGTGGCAACT
AAACACGAGGGTTGCGCTCGTTGCGAGACTTAACCCAACACCTTACGGCACGAGCTGACG
ACAGCCATGCACCACCTGTGTCCGCGTTCCCGAGGGCACCCCTCTCTTTCAAGAGGATTC
GCGGCATGTCAAGCCCTGGTAAGGTTCTTCGCTTTGCATCGAATTAAACCACATGCTCCA
CCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAG
GCGGGATACTTAACGCGTTAGCTACAGCACTGCACGGGTCGAGTCGCACAGCACCTAGTA
TCCATCGTTTACGGCTAGGACTACTGGGGTCTCTAATCCCATTTGCTCCCCTAGCTTTCG
TCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCT
CAATGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAGCTTGGTA
GTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAAAGCCACC
TACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGC
TGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCATTGTTTCTTCTCCGAG
AAAAGAAGTTGACGACCCGTGGGCCTTCCACCTCCACGCGGCATTGCTCCGTCAGGCTTT
CGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGT
CCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTG
CCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTTGGGCGGATTTCTCCTTTTGCTCC
TCAGCCTACGGGGTATTAGCAACCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCAGGTTC
TTACGCGTTACTCACCCGTTCGCCACTGGAAACACCACTTCCCGTTCGACTTGCATGTGT
TAAGCATGCCGCCAGCGTTCATCCTGAGCCAGGATCGAACTCTCCATGAGA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_022668_490.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_022668_490 count=1; cluster_weight=1; cluster=RRNA23S_NC_022668_490; cluster_score=1.000000; cluster_center=True;
aaaggaggtgatccagccgcaccttccagtacggctaccttgttacgacttcactccagtcgcaagcctagccttaggcatccccctccttacggttaagggtaatgacttcaaacatggccagctcctatagtgtgacgggcggtgtgtacaaggcccgggaacggattcaccgccgtatggctgaccggcgattactagcgattcctgcttcatgcaggcgagttgcagcctgcaatccgaactgaggacgggtttttggagttagctcaccctcgcgagatcgcgaccctttgtcccgcccattgtagcacgtgtgtcgcccagggcataaggggcatgatgacttggcctcatcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcgcggcatgtcaagccctggtaaggttcttcgctttgcatcgaattaaaccacatgctccaccgcttgtgcgggcccccgtcaattcctttgagtttcattcttgcgaacgtactccccaggcgggatacttaacgcgttagctacagcactgcacgggtcgagtcgcacagcacctagtatccatcgtttacggctaggactactggggtctctaatcccatttgctcccctagctttcgtctctcagtgtcagtgtcggcccagcagagtgctttcgccgttggtgttctttccgatctcaatgcatttcaccgctccaccggaaattccctctgcccctaccgtactccagcttggtagtttccaccgcctgtccagggttgagccctgggatttgacggcggacttgaaaagccacctacagacgctttacgcccaatcattccggataacgcttgcatcctctgtcttaccgcggctgctggcacagagttagccgatgcttattcctcagataccgtcattgtttcttctccgagaaaagaagttgacgacccgtgggccttccacctccacgcggcattgctccgtcaggctttcgcccattgcggaaaattccccactgctgcctcccgtaggagtctgggccgtgtctcagtcccagtgtggctgatcatcctctcggaccagctactgatcatcgccttggtaagctattgcctcaccaactagctaatcagacgcgagcccctccttgggcggatttctccttttgctcctcagcctacggggtattagcaaccgtttccagttgttgttcccctcccaagggcaggttcttacgcgttactcacccgttcgccactggaaacaccacttcccgttcgacttgcatgtgttaagcatgccgccagcgttcatcctgagccaggatcgaactctccatgaga

7
data/rrna/RRNA_23S/00001_RRNA23S_NC_023356_187.align.fasta Normal file
View File

@@ -0,0 +1,7 @@
>RRNA23S_NC_023356_187 count=1; cluster_weight=1; cluster=RRNA23S_NC_023356_187; cluster_score=1.000000; cluster_center=True;
TCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCA
AGTTGGACGGGAAGTGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCC
CTTGGGAGGGGAACAACAACTGGAAACGGTTGCTAATACCCCGTAGGCTGAGGGGCAAAA
GGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTT
ACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACA
CGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_023356_187.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_023356_187 count=1; cluster_weight=1; cluster=RRNA23S_NC_023356_187; cluster_score=1.000000; cluster_center=True;
tctcatggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgcaagttggacgggaagtggtgtttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaactggaaacggttgctaataccccgtaggctgaggggcaaaaggaggaatccgcccgaggaggggctcgcgtctgattagctagttggtgaggcaatagcttaccaaggcgatgatcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaa

9
data/rrna/RRNA_23S/00001_RRNA23S_NC_023465_72.align.fasta Normal file
View File

@@ -0,0 +1,9 @@
>RRNA23S_NC_023465_72 count=1; cluster_weight=1; cluster=RRNA23S_NC_023465_72; cluster_score=1.000000; cluster_center=True;
CATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGTGAGT
CGCACGGGAAGTGGTGTTTCTAGTGGCGGACGGGTGAGTAACGCGCAAGAACCTGCCCTT
GGGAGGGGAACAAGGGCTGGAAACGGTTGCTAATACCCCCCCGCTGAGGAGCAAAAGGAG
GAATCCGCCTGAGGAAGGGCTTGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCA
AGGTTATGATCAGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGC
CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGGACGAAAGCCTGACG
GAGCAATGCCGCGTGGAGGTAAAAGGCCCACGGGTCATGAACTTTTTTTACCAGAGAAGA
AGCAA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_023465_72.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_023465_72 count=1; cluster_weight=1; cluster=RRNA23S_NC_023465_72; cluster_score=1.000000; cluster_center=True;
catggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgtgagtcgcacgggaagtggtgtttctagtggcggacgggtgagtaacgcgcaagaacctgcccttgggaggggaacaagggctggaaacggttgctaatacccccccgctgaggagcaaaaggaggaatccgcctgaggaagggcttgcgtctgattagctagttggtgaggcaatagcttaccaaggttatgatcagtagctggtctgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaatggggacgaaagcctgacggagcaatgccgcgtggaggtaaaaggcccacgggtcatgaactttttttaccagagaagaagcaa

45
data/rrna/RRNA_23S/00001_RRNA23S_NC_023775_497.align.fasta Normal file
View File

@@ -0,0 +1,45 @@
>RRNA23S_NC_023775_497 count=1; cluster_weight=1; cluster=RRNA23S_NC_023775_497; cluster_score=1.000000; cluster_center=True;
AACAAGCATTGATCCGAAGATTCCCGAATAGGGCAACCTTTTATACTTTTTGCTGAATTC
ATAAGCAAAAAAGAGACAACTCAGTGAACTGAAACATCTTATTAACTGAAGGAAAATAAA
GCAAACGCGATTTCCCGAGTAGTGGCGAGCGAAAAGGAAACAGCCTAAACCAATTTTTAA
AATTGGGGTTGTGGGATAACCAAAAAATATTTTTAAAAATATTTTTCAAGTAGTTATTTA
ATTATAAATTAGACGAAGCAGCTGAATCCTGCACCATAGATGGTGAAAGTCCAGTCGTCA
AAAATTCAAATTTAACTATGTGTTTTTCCCAAGTAGCACGGGACACGAGAAATCCCGTGT
GAATCAGCGAGGACCACCTCGTAAGGCTAAATACTCCTAGATGACCGATAGTGAAATAGT
ACCGTGAGGGAAAGGTGAAAAGAACCCCTGAAGGGGAGTGAAATAGAACATGAAATCCTA
TGCTGACAAACAGTGGGAGGTTTTTTTTAAACTGACCGCGTGCCTGTTGAAGAATGAGCC
GGCGACTTAGAAAAAGTGGCGTGGTTAAGGAAAAATTCCGAAGCCTTAGCGAAAGCGAGT
CTGAATAGGGCGATCAAATATTTTAATATTTACAATTTAGTCATTTTTTCTAGACCCGAA
CCCGGGTGATCTAACCATGACCAGGATGAAACTTGGGTGATACCAAGTGAAGGTCCGAAC
CGACCGATGTTGAAAAATCGGCGGATGAGTTGTGGTTAGCGGTGAAATACCAGTCGAACC
CGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTACATCTAGTCTATCTA
GGGGTAAAGCACTGTTTCGGTGCGGGCTGTGAAAACGGTACCAAATCGTGGCAAACTCTG
AATACTAGAAATGACGGTGTAGTAGTGAGACTGTGGGGGATAAGCTCCATTGTCAAGAGG
GAAACAGCCCAGACCACCAGCTAAGGCCCCAAAATGGTAATGTAGTGACAAAGGAGGTGA
AAATGCAAACACAACCAGGAGGTTGGCTTAGAAGCAGCCATCCTTTAAAGAGTGCGTAAT
AGCTCACTGGTACTAGCGTTTTTGCGCCGAAAATGTACGGGACTTAATTATCTGCCGAAG
CTGTGGGATATATGAAAATAATGTATATATAAAAATACAATTTATATCGGTAGGGGAGCG
TTCTGCTTTAGGGTGAAGTTTAAATGTAAGTTTAGATGGACCAAGCAGAAGTGAGAATGT
CGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGATTCCTT
CACTAGGTTCGTCCATGAAGGGTGAGTCAGGACCTAAGGCGAGGCCGAACGGCGTAGTCG
ATGGCAAACAGGTTAATATTCCTGTACTGTTTTGTATTTGATACCAGGGGACAGAAGAGG
TAACAATTAGCCGTTATTGGATTTCGGTGGAAACTTGCAAAGCTGGGAAAAGAAAAAAAA
CTTCTTCCTTTTTAAAGCTAACGAGTGATACGTTTGTATTTTATTTATAAAATATGAATT
AATTTCTTATCATATTCTCAAGAAAAGCCTGTATTATCTATAAATGCAAAACACCTGTAC
CATAAACCGACACAGGTAGGTAGGTAGAGTATACCAAGGGGCGCGAGATAACTCTCTCTA
AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCAAGGGGTGATTTTTC
ATCTTTTGGCCGCAGTGACCAGGCCCAGGCGACTGTTTATCAAAAACACAGGTCTCCGCA
AAGTCGTAAGACAACATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAAGAAGTA
GGTTATTCTTTTTTAAGAAAAAGCTTGCGACTGAAGCCCCGGTGAACGGCGGCCGTAACT
ATAACGGTCCTAAGGTAGCGAAATTCCTTGTCGGATAAGTCCCGACCCGCACGAAAGGCG
TAACGATCTGGGCGCTGTCTCGGAGAGAGACTCGGTGAAATAGACATGTCTGTGAAGATG
CGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTGACTGTAGCCTGAAATTGAA
TTTGGGTTTTTTTTGCGCAGACTAGGTGGGAGGCGTTGATAATTTTCTTTTGGGAAAATT
GGAGCCAACAGTGAGAGACCACTCTGGAAAAGCTAGAATTCTAATGGCGTTCCTTGAAGC
AGGACGCTTGACAGTTTCAGGTGGGCAGTTTGACTGGGGCGGTCATCTCTTAAAAGGTAA
CAGAGATGTGCAAAGGTTCCTTCAGGCTGGACGGAAATCAGCCGTAGAGTATAAAGGCAG
AAGGGAGCTTGACTGTAAGACCTACAAGTCAAACAGGGGCGAAAGCCGGCCTTAGTGATC
CGACGGTACCGAGTGGAAGGGCCGTCGCTAAACGGATAAAAGTTACTCTAGGGATAACAG
GCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCAT
CGCAACCTGGGGCGGTAGTACGTCCCAAGGGTTGGGCTGTTCGCCCATGAAAGCGGTACG
TGAGCTGGGTTCAGAACGT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_023775_497.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_023775_497 count=1; cluster_weight=1; cluster=RRNA23S_NC_023775_497; cluster_score=1.000000; cluster_center=True;
aacaagcattgatccgaagattcccgaatagggcaaccttttatactttttgctgaattcataagcaaaaaagagacaactcagtgaactgaaacatcttattaactgaaggaaaataaagcaaacgcgatttcccgagtagtggcgagcgaaaaggaaacagcctaaaccaatttttaaaattggggttgtgggataaccaaaaaatatttttaaaaatatttttcaagtagttatttaattataaattagacgaagcagctgaatcctgcaccatagatggtgaaagtccagtcgtcaaaaattcaaatttaactatgtgtttttcccaagtagcacgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctagatgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaacccctgaaggggagtgaaatagaacatgaaatcctatgctgacaaacagtgggaggttttttttaaactgaccgcgtgcctgttgaagaatgagccggcgacttagaaaaagtggcgtggttaaggaaaaattccgaagccttagcgaaagcgagtctgaatagggcgatcaaatattttaatatttacaatttagtcattttttctagacccgaacccgggtgatctaaccatgaccaggatgaaacttgggtgataccaagtgaaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctagtctatctaggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaatcgtggcaaactctgaatactagaaatgacggtgtagtagtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagctaaggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaacacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagctcactggtactagcgtttttgcgccgaaaatgtacgggacttaattatctgccgaagctgtgggatatatgaaaataatgtatatataaaaatacaatttatatcggtaggggagcgttctgctttagggtgaagtttaaatgtaagtttagatggaccaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcactaggttcgtccatgaagggtgagtcaggacctaaggcgaggccgaacggcgtagtcgatggcaaacaggttaatattcctgtactgttttgtatttgataccaggggacagaagaggtaacaattagccgttattggatttcggtggaaacttgcaaagctgggaaaagaaaaaaaacttcttcctttttaaagctaacgagtgatacgtttgtattttatttataaaatatgaattaatttcttatcatattctcaagaaaagcctgtattatctataaatgcaaaacacctgtaccataaaccgacacaggtaggtaggtagagtataccaaggggcgcgagataactctctctaaggaactcggcaaaatgaccccgtaacttcgggagaaggggtgccaaggggtgatttttcatcttttggccgcagtgaccaggcccaggcgactgtttatcaaaaacacaggtctccgcaaagtcgtaagacaacatatgggggctgacgcctgcccagtgccggaaggttaaagaagtaggttattcttttttaagaaaaagcttgcgactgaagccccggtgaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcggataagtcccgacccgcacgaaaggcgtaacgatctgggcgctgtctcggagagagactcggtgaaatagacatgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagcttgactgtagcctgaaattgaatttgggttttttttgcgcagactaggtgggaggcgttgataattttcttttgggaaaattggagccaacagtgagagaccactctggaaaagctagaattctaatggcgttccttgaagcaggacgcttgacagtttcaggtgggcagtttgactggggcggtcatctcttaaaaggtaacagagatgtgcaaaggttccttcaggctggacggaaatcagccgtagagtataaaggcagaagggagcttgactgtaagacctacaagtcaaacaggggcgaaagccggccttagtgatccgacggtaccgagtggaagggccgtcgctaaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcatcgcaacctggggcggtagtacgtcccaagggttgggctgttcgcccatgaaagcggtacgtgagctgggttcagaacgt

3
data/rrna/RRNA_23S/00001_RRNA23S_NC_023835_195.align.fasta Normal file
View File

@@ -0,0 +1,3 @@
>RRNA23S_NC_023835_195 count=1; cluster_weight=1; cluster=RRNA23S_NC_023835_195; cluster_score=1.000000; cluster_center=True;
TGTATTCTTGCTTGCATGGAACCACCTTATCCATCCCGAACTAAGAAGTGAAACGTGCAA
GGGGCGACAATACTTGAGGGGAGGCCCTCTGGGAAAATAGTCTAATGCAAGGTA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_023835_195.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_023835_195 count=1; cluster_weight=1; cluster=RRNA23S_NC_023835_195; cluster_score=1.000000; cluster_center=True;
tgtattcttgcttgcatggaaccaccttatccatcccgaactaagaagtgaaacgtgcaaggggcgacaatacttgaggggaggccctctgggaaaatagtctaatgcaaggta

48
data/rrna/RRNA_23S/00001_RRNA23S_NC_024167_122.align.fasta Normal file
View File

@@ -0,0 +1,48 @@
>RRNA23S_NC_024167_122 count=1; cluster_weight=1; cluster=RRNA23S_NC_024167_122; cluster_score=1.000000; cluster_center=True;
GTTCAAGGGAAGAGGGGCTTACGGTGGATACCTAGGCATTCAGAGGCGAAGAAGGGCGTC
GTGGCCGACGAAATGCTCCGGGGAGCTGGGATTGTGTGAGGATCCGGAGATTCCCGAATG
GGGTAACCCCAATGTACTCGTGGGCTTTTGGCTTGCGAGGGGCAACCTGGCGAACTGAAA
CATCTTAGTAGCCAGAGGAAGAGAAAGCAAACGCGATTCCCCCAGTAGCGGCGAGCGAAG
AGGGAACAGCCTAAACCGGTTGATCCGGGGTTGTGGGAGGGCAGTTAGGGTGTTTCTTCG
CTAGACGAAGCGGTTGAGTTCCGCACCGCAGATGGTGAGAGTCCAGTAGTCAAAAGCGTC
ATTTCGCCCTTGTCCCAACCCGAGTAGCATGGGGCACGTGAAATCCCGTGTGAATCTGCG
AGGACCACCTCGTAAGGCTAAATACTCCTGGATGACCGATAGCGAACTAGTACCGTGAGG
GAAGGGTGAAAAGAACCCTGGAGAGGGAGTGAAAAAGACCATGAAACCGTAAGCTTACAA
GCGGTGGGAGGGGGCTTGAACCCCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTC
ATAGGCGGTGGCACGGCTAAGGCGATGCACGCCGAAACCGTAGCGAAAGCAAGTCTGACA
AGGGCCCATGTCATCGTTTATGGACCCGAACCCGAGTGATCTAACCATGGCCAGGGTGAA
GCTTTGGTGAGACTGAGTGGAGGCCCGTACCGACCGATGTTGAAAGATCGGCGGATGAGC
TGTGGTTAGGGGTGAAATGCCAATCGAACTCGGAGCTAGCTGGTTCTCCCCGAAATGCGT
TGAGGCGCAGCGGTGTTCGAGGGTGGGCCAGGGGTAAAGCACTGTTTCGGTGCGGGCTGC
GAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTGGCCCTGCTTGCCGAACACCAGTG
AGACGAAGGGGGATAAGCTTCTTTGTCGAGAGGGGAACAGCCCAGACCATCGGCTAAGGC
CCCCAAATGGCCGCTAAGTGGCAAAGGATGTGGGAGTGCTCAGACAGCCAGGAGGTTTGC
CTAGAAGCAGCCACCCTTTAAAGAGTGCGTAATAGCTCACTGATCAAGCGCTCCCGCGCC
AAAGATGAACGGGACTCAAGCGGCCTGCCGAGGCCATGGGATGTAAAAAGCATCGGTAGG
GGAGCGTTCCGCGGCAGGTTGAAGCGTAAGCGAGAGCAGGCGTGGACGAGGCGGAAGTGA
GAATGTCGGCTTGAGTAACGCAAACACTGGTGAGAATCCAGTGCCCCGAAAACCCAAGGG
TTCCCCTGGAAGGCTCGTCCACGGGGGGTGAGTCAGGGCCTAAGGTGAGGCCGAAGGGCG
CAGCCGATGGACAACAGGCATACATTCCTGTACCTCTCCGGGCTGGGGACGAGGGACGGA
GCAGGCTCGGTTGGCCGAGGGATGGTATCTCGGTTGAAGGGTTCAAGGCGCGATGGGGGC
AGTGATCCTGGCCCTAGCTAAGGCCCGAGTTAGTAAAGCGTCAAGGCGCTGAAGAAACCT
ATGCCATGCTTCCAAGAAAAGCTCGTACCTCTTCAGGCTCGGAGGGCCTGTACCCGAGAC
CGACACAGGTGGGTGGGTAGAGAATACCTAGGGGCGCGAGGCAACCCTCTCTAAGGAACT
CGGCAAAATAGCCTCGTAACTTCGGGAGAAGAGGTGCTCCCCTCTTTGGGGGGGAGCCGC
AGGGACCAGGCCCAAGCGACTGTTTACCAAAAACACAGGTCTCCGCCAAGTTGAAAAACG
ATGTAAGGGGGCTGACGCCTGCCCAGTGCTGGAAGGTTAAGGAAGTTGGTGGCCCTCTCC
TTGAGAGAGGGGAAGCTGGCAACCGAAGCCCCAGTCAACGGCGGTCGTAACTATAACGAT
CCTAAGGTAGCGAAATTCATTGTCAGGTAAGTTCTGACCCGCACGAAAGGCGTAACGATT
TGGGCGCTGTCTCGGAGAGGGGCTCGGTGAAATAGACATGCCTGTGAAGATGCGGGCTAC
CTCCACTGGGACAGAAAGACCCTATGAAGCTTTACTGTTCCCTGGCATTGGGTCTCGGCC
CTCCCTGCGCAGCCTAGGTGGGAGGCACAGAAGCCCTTCTTCCGGGAAGGGCCAAGCCAT
CCGTGAGAGACCACCCTGGAAGGGCTAAGATCCTAAACCGATGCCCTATGATAGGCGTTG
GAACCGTGCCAGGCAGACAGTTTCTCTGGGGCAGAGGCCTCCCAAAGAGTAATGGAGGCG
TGCAAAGGTTCCCTCAGGCTGGACGGGAATCAGTTGTAGAGTGTAAAGGCAGAAGGGAGC
TTGACTGCAAGACCAACAAGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTG
CCGCGTGGAAGGGCCGTCGCTTATCGGATAAAAGTTACTCTAGGGATAACAGGCTGATCT
TCCCCAAGAGTCCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTTAACACATCCT
GGGGCGGTAGCACGTCCCAAGGGTTGGGCTGTTCGCCCATCAAAGTGTTACATGAGCTGG
GTTCAGAACGTCGTGAGACAGTTTGGTCCATATCTAGTGGAGGCGTGAGAGCATTGAGGG
GCCATCTCCCTAGTACGAGAGGACCGGGAGGCACGCACCGCTGGTGTGCCAGTTCTCGTG
CCAACGGGACACGCTGGGTAGCCATGTGCGGAACGGATCACTGCTGAAAGCATCTAAGTA
GGAAGCCTACCCCAAGATGAGTGCTC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_024167_122.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_024167_122 count=1; cluster_weight=1; cluster=RRNA23S_NC_024167_122; cluster_score=1.000000; cluster_center=True;
gttcaagggaagaggggcttacggtggatacctaggcattcagaggcgaagaagggcgtcgtggccgacgaaatgctccggggagctgggattgtgtgaggatccggagattcccgaatggggtaaccccaatgtactcgtgggcttttggcttgcgaggggcaacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccccagtagcggcgagcgaagagggaacagcctaaaccggttgatccggggttgtgggagggcagttagggtgtttcttcgctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtagtcaaaagcgtcatttcgcccttgtcccaacccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaaccctggagagggagtgaaaaagaccatgaaaccgtaagcttacaagcggtgggagggggcttgaacccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggcacggctaaggcgatgcacgccgaaaccgtagcgaaagcaagtctgacaagggcccatgtcatcgtttatggacccgaacccgagtgatctaaccatggccagggtgaagctttggtgagactgagtggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgttcgagggtgggccaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactggccctgcttgccgaacaccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggctaaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcccgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgtaaaaagcatcggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagggcgcagccgatggacaacaggcatacattcctgtacctctccgggctggggacgagggacggagcaggctcggttggccgagggatggtatctcggttgaagggttcaaggcgcgatgggggcagtgatcctggccctagctaaggcccgagttagtaaagcgtcaaggcgctgaagaaacctatgccatgcttccaagaaaagctcgtacctcttcaggctcggagggcctgtacccgagaccgacacaggtgggtgggtagagaatacctaggggcgcgaggcaaccctctctaaggaactcggcaaaatagcctcgtaacttcgggagaagaggtgctcccctctttgggggggagccgcagggaccaggcccaagcgactgtttaccaaaaacacaggtctccgccaagttgaaaaacgatgtaagggggctgacgcctgcccagtgctggaaggttaaggaagttggtggccctctccttgagagaggggaagctggcaaccgaagccccagtcaacggcggtcgtaactataacgatcctaaggtagcgaaattcattgtcaggtaagttctgacccgcacgaaaggcgtaacgatttgggcgctgtctcggagaggggctcggtgaaatagacatgcctgtgaagatgcgggctacctccactgggacagaaagaccctatgaagctttactgttccctggcattgggtctcggccctccctgcgcagcctaggtgggaggcacagaagcccttcttccgggaagggccaagccatccgtgagagaccaccctggaagggctaagatcctaaaccgatgccctatgataggcgttggaaccgtgccaggcagacagtttctctggggcagaggcctcccaaagagtaatggaggcgtgcaaaggttccctcaggctggacgggaatcagttgtagagtgtaaaggcagaagggagcttgactgcaagaccaacaagtcgagcagggacgaaagtcggccttagtgatccgacggtgccgcgtggaagggccgtcgcttatcggataaaagttactctagggataacaggctgatcttccccaagagtccacatcgacgggaaggtttggcacctcgatgtcggcttaacacatcctggggcggtagcacgtcccaagggttgggctgttcgcccatcaaagtgttacatgagctgggttcagaacgtcgtgagacagtttggtccatatctagtggaggcgtgagagcattgaggggccatctccctagtacgagaggaccgggaggcacgcaccgctggtgtgccagttctcgtgccaacgggacacgctgggtagccatgtgcggaacggatcactgctgaaagcatctaagtaggaagcctaccccaagatgagtgctc

48
data/rrna/RRNA_23S/00001_RRNA23S_NC_024168_518.align.fasta Normal file
View File

@@ -0,0 +1,48 @@
>RRNA23S_NC_024168_518 count=1; cluster_weight=1; cluster=RRNA23S_NC_024168_518; cluster_score=1.000000; cluster_center=True;
AGGAGAGCACTCATCTTGAGGTGGGCTTCCTACTTAGATGCTTTCAGCAGTTATCCGCTC
CGCACTTGGCTACCCAGCGTGTACCGTGGGCACGATAACTGGTACACCAGCGGTGCGTCC
CTCCCGGTCCTCTCGTACTAGGGAGAGGCCCTCTCAATGCTCTAGCGCCCGCACCGGATA
TGGACCAAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAAC
AGCCCAACCCTTGGCACGTACTACCGCGCCAGGTGGCGAAGAGCCGACATCGAGGTGCCA
AACCTTCCCGTCGATGTGAACTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTT
TATCCGTTGAGCGACGGCCCTTCCACTCGGAACCGTCGGATCACTAAGGCCGACTTTCGT
CCCTGCTCGACGGGTAGGTCTCGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAAGGCTG
ATTTCCGTCCAGCCTGAGGAAACCTTTGCACGCCTCCGTTACCCTTTGGGAGGCCTACGC
CCCATAGAAACTGTCTACCTGGGACTGTCCCCTAGCCTTCTTCTAGGTCTAAGGTTAGAA
TCCTAGCCCTTCTAGGGTGGTCTCTCATCTTCGGCTCGAGTTTCCCCGGAAAGAAACCGT
CTTCGCCTCCCACCTAGACTGCGCAAGAAGGGCCCAAACCCAATCCCAGGGAACAGTAAA
GCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATT
TCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAC
TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGG
GGCTTCGGTCGCCAGCTTCCCCGTATTCGGGTCACCGACTTCCTTAACCTTCCGGCACTG
GGCAGGCGTCAGCCCCCATACGTCGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA
ACAGTCGCCTGGGCCTGGTCACTGCGGCCTCCTTTTGAAAGGAGGCACCCCTTCTCCCGA
AGTTACGGGGCCATCTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTC
TCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTGCCTGCTTGCTTTTTTAAAAGGCG
TAAGAGCTTTTCTTGGGAGCGTGGCATCAGCTACTTCAGCCCCCGTAGGTGCCTAGTACT
CAGGTTTTTTTGCCCTTGAACCGATGACCATTCTTCGGCTAGCTTAGCCTCCTCCGTCCC
TCTTATTGCCAGCAAGAGGCAGTACAGGAATTTTGACCTGTTGTCCATCGACTGCGCCGT
TCGGCCTGATCTTAGGTCCTGACTCACCCTCCGTGGACGAGCCTTGCGGAGGAAACCTTG
GGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCACTT
CCGCTTCGTCCACACCTGCTTACGCTGATGCTTCTCCCTAATGCGGAACGCTCCCCTACC
GATGTCTTCAAAAGACATCCCACAGCCTCGGCAGACCGCTTAGTCCCGTTCATCTTCGGC
GCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCA
AACCTCCTGGCTGTCTTTGCACTCTCACCTCCTTTGCCACTGAGCGGTCATTTAGGGGCC
TTAGCTGGTGGTCTGGGCTGTTTCCCTTTTGACGATGAAGCTTATCCCCCACCGTCTTAC
TGGCTGACCGCTGGCCGTGCCCAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTTTCGC
AGCCCGCACCGAAACAGTGCTTTACCCCTGGGCAGTCCAGTCAACCGCTGCGCCTCAACG
CATTTCGGGGAGAACCAGCTAGCTCCGAGTTCGAGTGGCATTTCACCCCTAACCACAGCT
CATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTTGGCTTCACCCAAGCTTC
ACCCTGGCCATGGATAGATCACCCGGGTTCGGGTCCATAAGCAGTGACATTCGCCCGAAA
AAGACTCGCTTTCGCTACGGCTCCGGAAAACCTTAACCAGGCCACTGCCTATAAGTCGCC
GGCTCATTCTTCAACAGGCACGCGGTCAGAGATCCCATTCTCCTCCCACTGCTTGGAGGC
TTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCTTTCCCTCACGG
TACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTACGAGGTGGTCCTCGCTGATT
CACACGGGATTTCACGTGCCCCATGCTACTCGGGTTAGAGCGTAAGCTAGAATTACTTTC
GGCTACTGGACTATCACCATCTAAGGTGCAGGACTCAGCTGCTTCGCCTAGGAACTCTTT
GCTCGTGTCGCCCTCCCACAACCCCGCTTATCCAAGAAGGAAGCGGTTTAGGCTGTTCCC
ATTTCGCTCGCCACTACTCAGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGAT
GTTTCAGTTCACCAGGTTGTCTCTTTCCTGCCTATGTATTCAGCAGGTAGTCTTATAGGT
TCCCCTATTCGGGCATCTCCGGATCTGTGCTTGTTCTCAGCTCCCCGAAGCATTTCGTCG
CTTGCTACGCCCTTCGTCGTCTCTGGGTGCCTAGGTATCCACCATAAGCCCTTATTCATT
TGAA

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_024168_518.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_024168_518 count=1; cluster_weight=1; cluster=RRNA23S_NC_024168_518; cluster_score=1.000000; cluster_center=True;
aggagagcactcatcttgaggtgggcttcctacttagatgctttcagcagttatccgctccgcacttggctacccagcgtgtaccgtgggcacgataactggtacaccagcggtgcgtccctcccggtcctctcgtactagggagaggccctctcaatgctctagcgcccgcaccggatatggaccaaactgtctcacgacgttctgaacccagctcacgtaccgctttaatgggcgaacagcccaacccttggcacgtactaccgcgccaggtggcgaagagccgacatcgaggtgccaaaccttcccgtcgatgtgaactcttggggaagatcagcctgttatccctagagtaacttttatccgttgagcgacggcccttccactcggaaccgtcggatcactaaggccgactttcgtccctgctcgacgggtaggtctcgcagtcaagctcccttctgcctttgcactcgaaggctgatttccgtccagcctgaggaaacctttgcacgcctccgttaccctttgggaggcctacgccccatagaaactgtctacctgggactgtcccctagccttcttctaggtctaaggttagaatcctagcccttctagggtggtctctcatcttcggctcgagtttccccggaaagaaaccgtcttcgcctcccacctagactgcgcaagaagggcccaaacccaatcccagggaacagtaaagcttcatagggtctttctgtccaggtgcaggtagtccgcatcttcacagacaagtctatttcaccgagtctctctccgagacagtgcccagatcgttacgcctttcgtgcgggtcggaacttacccgacaaggaatttcgctaccttaggaccgttatagttacggccgccgttcaccggggcttcggtcgccagcttccccgtattcgggtcaccgacttccttaaccttccggcactgggcaggcgtcagcccccatacgtcgtcttacgactttgcggagacctgtgtttttggtaaacagtcgcctgggcctggtcactgcggcctccttttgaaaggaggcaccccttctcccgaagttacggggccatcttgccgagttccttagagagagttgtctcgcgcccctaggtattctctacctacccacctgtgtcggtttcgggtacaggtgcctgcttgcttttttaaaaggcgtaagagcttttcttgggagcgtggcatcagctacttcagcccccgtaggtgcctagtactcaggtttttttgcccttgaaccgatgaccattcttcggctagcttagcctcctccgtccctcttattgccagcaagaggcagtacaggaattttgacctgttgtccatcgactgcgccgttcggcctgatcttaggtcctgactcaccctccgtggacgagccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccacacctgcttacgctgatgcttctccctaatgcggaacgctcccctaccgatgtcttcaaaagacatcccacagcctcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactctttcaagggtggctgcttctaggcaaacctcctggctgtctttgcactctcacctcctttgccactgagcggtcatttaggggccttagctggtggtctgggctgtttcccttttgacgatgaagcttatcccccaccgtcttactggctgaccgctggccgtgcccagtattcagagtttgcctcgatttggtaccgctttcgcagcccgcaccgaaacagtgctttacccctgggcagtccagtcaaccgctgcgcctcaacgcatttcggggagaaccagctagctccgagttcgagtggcatttcacccctaaccacagctcatccgctgatttttcaacatcagtcggttcggacctccacttggcttcacccaagcttcaccctggccatggatagatcacccgggttcgggtccataagcagtgacattcgcccgaaaaagactcgctttcgctacggctccggaaaaccttaaccaggccactgcctataagtcgccggctcattcttcaacaggcacgcggtcagagatcccattctcctcccactgcttggaggcttacggtttcatgttctatttcactccccgatgggggttcttttcacctttccctcacggtactacttcactatcggtcacccaggagtatttagccttacgaggtggtcctcgctgattcacacgggatttcacgtgccccatgctactcgggttagagcgtaagctagaattactttcggctactggactatcaccatctaaggtgcaggactcagctgcttcgcctaggaactctttgctcgtgtcgccctcccacaaccccgcttatccaagaaggaagcggtttaggctgttcccatttcgctcgccactactcagggaatcgcttttgctttcttttcctctggctactaagatgtttcagttcaccaggttgtctctttcctgcctatgtattcagcaggtagtcttataggttcccctattcgggcatctccggatctgtgcttgttctcagctccccgaagcatttcgtcgcttgctacgcccttcgtcgtctctgggtgcctaggtatccaccataagcccttattcatttgaa

50
data/rrna/RRNA_23S/00001_RRNA23S_NC_024169_68.align.fasta Normal file
View File

@@ -0,0 +1,50 @@
>RRNA23S_NC_024169_68 count=1; cluster_weight=1; cluster=RRNA23S_NC_024169_68; cluster_score=1.000000; cluster_center=True;
CAAGGGCTTATGGTGGATACCTAGGCACCCAGAGACGAAGAAGGGCGTGGTCAGCGACGA
AATGCTCCGGGGAGCCGATAGCCTGCTTTGATCCGGAGATTCCCGAATGGGGTAACCTCT
TGAACTCCTGCTGAATCTATAGGCAGGGAAGAGCCAACCTGGCAAACTGAAACATCTTAG
TAGCCAGAGGAACAGAAAGCAAAAGCGATTCCCGAAGTAGTGGCGAGCGAAATGGGAACA
GCCTAAACCGTGTAAGCGGGGTTGTGGGGGGATCTGTTAAAATCAGGAAGATATAGCTGA
AGGTGAAGCAGCTGAGTCCTGCACCCAAGATGGTGAGAGTCCAGTAACTAAAAGCTTTCC
TGGTTTTAGTCCTAACCCGAGTAACATGGGGCACGTGAAACCCTGTGTGAATCTGCGAGG
ACCACCTCGTAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGAGGGAA
AGGTGAAAAGAACCCCAACCGGGGAGTGAAAAAGAACATGAAACCGTAAGCCTACAAGCA
GTGGGAGGAGAATAGAATCTTTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTATA
GGCAGTGGCCAGGTTAAGGGCAACACCGGAGCCGCAGCGAAAGCGAGTCTAAATAAGGCG
CATGTCACTGTTTATGGACCCGAACCCGGGTGATCTATCCATGGCCAGGATGAAGCTTAG
GTGAAACTACGTGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGCTGTGGA
TAGGGGTGAAATGCCATTCGAACCCGGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGC
GCAGCGGTTAGCCAGGCTGTCTAGGGGTAAAGCACTGTTTCGGTGCGGGCTGCGAGAGCG
GTACCAAATCGAGGCAAACTCTGAATACTAGACATTGCAACGGGCTAGCCAGTGAGACGG
TGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCAGATCACCAGTTAAGGCCCCTAA
ATGACCGCTCAGTGATAAAGGAGGTGAGAGTGCAAAGACAGCCAGGAGGTTTGCCTAGAA
GCAGCTACCCTTAAAAGAGTGCGTAATAGCTCACTGATCAAGCGCTCTCGCACCGAAGAT
GAATGGGACTAAGCGGTCTGCCGAAGCTGTGGGATGCCTGAAAAGGCATCGGTAGGGGAG
CGTTCCGCCATAGGGAGAAGCGCCAGTGAAAGCAGGCGTGGACGAAGCGGAAGTGAGAAT
GTCGGCTTGAGTAACGCACACATAGGTGAGAATCCTATGCCCCGAAAACCCAAGGTTTCC
TTTGCAAGGCTCGTCCACGGAGGGTTAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGT
CGATGGACAACAGGTTAATATTCCTGTACCACTTGTTTGTTGGCCATGAGAGGGACGGAG
GAGGCTAGGCTGGCCGAAGATTGGTCATCGGCTCAAGGGTTGAAAGGCCCGAGTACTAGG
TGCTACGGTATCAAAGCAGTTAATGCCACGCTCCCAAGAAAAGCTCTTCAAGCTGTAAAA
GCAAATAAGTGCCTGTACCTAAACCGACACAGGTGGGTAGGTTGAGAATACCTAGGGGCG
CGAGATAACTCTCTCTAAGGAACTCGGCAAGATGGCCCCGTAACCTAGGGAGAAGGGGTG
CCTCCTCTAAGCAAGAGGAGGCCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACA
CAGGTCTCCGCAAAGTCGTAAGACGACGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAG
GTTAAGGAAGTTGGTGACCTGAATACAGGGAAGCTGGCAACCGAAGCCCCGGTGAACGGC
GGCCGTAACTATGACGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGC
ACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGACTCGGTGAAATAGACTTGTC
TGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTTACTGTTCCC
TGGGATGGGCTTTGGGCCCTTCTTGCGCAGCTTAGGTGGAAGGCTAAGAAGGCTTTCTTC
CGGGAAAGCCAGAGCCAACAGTGAGATACCACCCTAGAAGGGCTAGGATTCTAACCTTAC
GCCTACAAGCAGGCTAAGGGACAGTCCCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCC
CAAAAAGTAACGGAGGCGTGCAAAGGTTTCCTCAGGCTGGACGGAAATCAGCCCTCGAGT
GCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACAAGTCGAGCAGGGACGAAAGTCGGC
CTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTA
GGGATAACAGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGAT
GTCGGCTCTTCGCCACCTGGCGCGGTAGTACGTGCCAAGGGTTGGGCTGTTCGCCCATTA
AAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTTGGTCCATATCCGGTGCAG
GCGTTAGAGCATTGAGGGGATCCCTCCTTAGTACGAGAGGACCGGGAGGGACGCACCGCT
GGTGTACCAGTTATCGTGCCAACGGTACACGCTGGGTAGCCAAGTGCGGAGCGGATAACT
GCTGAAAGCATCTAAGTAGGAAGCCCACCCCAAGATGAGTGCTCTCCATATCTAAGCTAA
CCTTCCTTAGGTCGGTTTGCTGAAATACAAGGTCACGGCAAGACTAGCCGTTACAAAGAT
AGGCGACAAGTAGAAGCACAGCAATGTGTGCAGCTGAGTCGTCCTAACAGACCGAGAGGT
TTGAAC

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_024169_68.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_024169_68 count=1; cluster_weight=1; cluster=RRNA23S_NC_024169_68; cluster_score=1.000000; cluster_center=True;
caagggcttatggtggatacctaggcacccagagacgaagaagggcgtggtcagcgacgaaatgctccggggagccgatagcctgctttgatccggagattcccgaatggggtaacctcttgaactcctgctgaatctataggcagggaagagccaacctggcaaactgaaacatcttagtagccagaggaacagaaagcaaaagcgattcccgaagtagtggcgagcgaaatgggaacagcctaaaccgtgtaagcggggttgtggggggatctgttaaaatcaggaagatatagctgaaggtgaagcagctgagtcctgcacccaagatggtgagagtccagtaactaaaagctttcctggttttagtcctaacccgagtaacatggggcacgtgaaaccctgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccccaaccggggagtgaaaaagaacatgaaaccgtaagcctacaagcagtgggaggagaatagaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggccaggttaagggcaacaccggagccgcagcgaaagcgagtctaaataaggcgcatgtcactgtttatggacccgaacccgggtgatctatccatggccaggatgaagcttaggtgaaactacgtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggataggggtgaaatgccattcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttagccaggctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagacattgcaacgggctagccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagttaaggcccctaaatgaccgctcagtgataaaggaggtgagagtgcaaagacagccaggaggtttgcctagaagcagctacccttaaaagagtgcgtaatagctcactgatcaagcgctctcgcaccgaagatgaatgggactaagcggtctgccgaagctgtgggatgcctgaaaaggcatcggtaggggagcgttccgccatagggagaagcgccagtgaaagcaggcgtggacgaagcggaagtgagaatgtcggcttgagtaacgcacacataggtgagaatcctatgccccgaaaacccaaggtttcctttgcaaggctcgtccacggagggttagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtaccacttgtttgttggccatgagagggacggaggaggctaggctggccgaagattggtcatcggctcaagggttgaaaggcccgagtactaggtgctacggtatcaaagcagttaatgccacgctcccaagaaaagctcttcaagctgtaaaagcaaataagtgcctgtacctaaaccgacacaggtgggtaggttgagaatacctaggggcgcgagataactctctctaaggaactcggcaagatggccccgtaacctagggagaaggggtgcctcctctaagcaagaggaggccgcagtgaccaggcccaggcgactgtttaccaaaaacacaggtctccgcaaagtcgtaagacgacgtatgggggctgacgcctgcccagtgccggaaggttaaggaagttggtgacctgaatacagggaagctggcaaccgaagccccggtgaacggcggccgtaactatgacggtcctaaggtagcgaaattccttgtcgggtaagttccgacccgcacgaaaggcgtaacgatctgggcactgtctcggagagagactcggtgaaatagacttgtctgtgaagatgcggactacctgcacctggacagaaagaccctatgaagctttactgttccctgggatgggctttgggcccttcttgcgcagcttaggtggaaggctaagaaggctttcttccgggaaagccagagccaacagtgagataccaccctagaagggctaggattctaaccttacgcctacaagcaggctaagggacagtcccaggtagacagtttctatggggcgtaggcctcccaaaaagtaacggaggcgtgcaaaggtttcctcaggctggacggaaatcagccctcgagtgcaaaggcagaagggagcttgactgcaagacccacaagtcgagcagggacgaaagtcggccttagtgatccgacggtgccgagtggaagggccgtcgctcaacggataaaagttactctagggataacaggctgatcttccccaagagttcacatcgacgggaaggtttggcacctcgatgtcggctcttcgccacctggcgcggtagtacgtgccaagggttgggctgttcgcccattaaagcggtacgtgagctgggttcagaacgtcgtgagacagtttggtccatatccggtgcaggcgttagagcattgaggggatccctccttagtacgagaggaccgggagggacgcaccgctggtgtaccagttatcgtgccaacggtacacgctgggtagccaagtgcggagcggataactgctgaaagcatctaagtaggaagcccaccccaagatgagtgctctccatatctaagctaaccttccttaggtcggtttgctgaaatacaaggtcacggcaagactagccgttacaaagataggcgacaagtagaagcacagcaatgtgtgcagctgagtcgtcctaacagaccgagaggtttgaac

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_024817_116.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_024817_116 count=1; cluster_weight=1; cluster=RRNA23S_NC_024817_116; cluster_score=1.000000; cluster_center=True;
GTAATCGTGCTTCAAGCGCAAAGGAACCACACTATTCCATCTCGAACTAGCCTGTGAAAC
TTTGTAGCGAGGAACAAGGTATGGGGGACACCCCATGTAAACATTCCTTCAGTGCGATTT
T

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_024817_116.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_024817_116 count=1; cluster_weight=1; cluster=RRNA23S_NC_024817_116; cluster_score=1.000000; cluster_center=True;
gtaatcgtgcttcaagcgcaaaggaaccacactattccatctcgaactagcctgtgaaactttgtagcgaggaacaaggtatgggggacaccccatgtaaacattccttcagtgcgatttt

26
data/rrna/RRNA_23S/00001_RRNA23S_NC_024829_52.align.fasta Normal file
View File

@@ -0,0 +1,26 @@
>RRNA23S_NC_024829_52 count=1; cluster_weight=1; cluster=RRNA23S_NC_024829_52; cluster_score=1.000000; cluster_center=True;
AGGGTGCATAAGGATGTTATGCTCAGCTTGGAATACGATCATGAAGTTGAACGTTCCGGA
GATACCTAGAGGCATACCATCAGAGAAAGAACCCTGACCGATTGGGTAGATCAAGAAAAC
TGCGAATGCAGCTGCAACTGGTGCAGAGTAAGCAACAGCAATCCAAGGACGCATACCTAG
ACGGAAAGATAGTTCCCACTCACGACCCATGTAAGCACAGATTCCGATTAGGAAGTGACA
AAGGATTAGTAGGTAAGGCCCACCGTTGTAAAGCCACTCATCAAGGGAAGCAGCTTCCCA
GATTGGGTAGAAGTGCATACCGATTGCGTTACTCATAGGAATAACAGCACCAGAAATAAT
GTTGTTCCCGTAAAGAAGGGAACCAGAAACTGGCTCACGGATACCATCAATATCTACAGG
AGGAGCTGCAACGAATGCAATGATGAATACGGAGATAGCAGTCAATAGGCAAGGAATCAT
CAAAACACCAAACCAACCAATGTATAGGCGGTTCTCAGTACTAGTGATCCAATCACAGAA
ACGACCCCATAAGCTGGAGCTTTCACGTCTTTCTAAAATAGCAGTCATGATTAATTAAGT
TTTTACGAATGTAGAGATTTTCCCAAGCTTCCAAGAAAACTTGTTCTTTATAGTATACCA
CATCTAGAGGCCAACAAAGAAAAAAGAAAAATAAATAACAAGAAAAAATAAATATTAAAA
AATAAATTAATTTTGTGTGCTTTTTAGAATACCGCTGGTCGGACTCGAACCGACACGGGA
AGCCCACTACATTTTGAGTGTAGCGTGTCTACCAATTCCACCACAGCGGCATATTAGTAG
TATATCGGAAAGAATCCAGTCCTTCCAACTTTAATTTAAGTATGGATTGCCTGGTGATCC
AGGCAATCCATACTTAAATTAAAGTTGGAGTTTGAGAAGTGCTTAAACGAGCTAACTCAA
ATAAGGAATCACCAGCTATTCCTGCCAAGACAGTACTAATGACACAAACTAAAATACCAA
CCTCAAGAGGTTGGAGGATCTGTTGGGCCCATCCTCGAGGTGGGTACTGAAGAACCGAAA
GAGACATTTCTTCCGAAGACTTGACCAACATAATTTTAATAGCTAAAAAAACAATAAACT
GTTTGGTTTATTAGTTGGTTATTTCAGAAGAAAAATCTTAAGTTACTTTGGCATGTACAC
AATGAGAAACCAATTACCAGCTCCCTTTATATCTGGATAATTTACATAAATTAGGATTTT
AGGTAAGCCATGCACAATAGTTGACTATATATTCCTTGACTCTTTATTCTATGTAACTTT
ATGATTTAACACACTAATGATTTACTTAAAACAAAATACCAATCACTGTTGTACACTTTC
CAAACTAATTGAGGGTTGTAATTCGGAAAAGAGTCCAATAGATACAACTAGACAGCCTTT
TGAATGTAAACCCTCTTTTTAAGAGAATTACAAT

2
data/rrna/RRNA_23S/00001_RRNA23S_NC_024829_52.fasta Normal file
View File

@@ -0,0 +1,2 @@
>RRNA23S_NC_024829_52 count=1; cluster_weight=1; cluster=RRNA23S_NC_024829_52; cluster_score=1.000000; cluster_center=True;
agggtgcataaggatgttatgctcagcttggaatacgatcatgaagttgaacgttccggagatacctagaggcataccatcagagaaagaaccctgaccgattgggtagatcaagaaaactgcgaatgcagctgcaactggtgcagagtaagcaacagcaatccaaggacgcatacctagacggaaagatagttcccactcacgacccatgtaagcacagattccgattaggaagtgacaaaggattagtaggtaaggcccaccgttgtaaagccactcatcaagggaagcagcttcccagattgggtagaagtgcataccgattgcgttactcataggaataacagcaccagaaataatgttgttcccgtaaagaagggaaccagaaactggctcacggataccatcaatatctacaggaggagctgcaacgaatgcaatgatgaatacggagatagcagtcaataggcaaggaatcatcaaaacaccaaaccaaccaatgtataggcggttctcagtactagtgatccaatcacagaaacgaccccataagctggagctttcacgtctttctaaaatagcagtcatgattaattaagtttttacgaatgtagagattttcccaagcttccaagaaaacttgttctttatagtataccacatctagaggccaacaaagaaaaaagaaaaataaataacaagaaaaaataaatattaaaaaataaattaattttgtgtgctttttagaataccgctggtcggactcgaaccgacacgggaagcccactacattttgagtgtagcgtgtctaccaattccaccacagcggcatattagtagtatatcggaaagaatccagtccttccaactttaatttaagtatggattgcctggtgatccaggcaatccatacttaaattaaagttggagtttgagaagtgcttaaacgagctaactcaaataaggaatcaccagctattcctgccaagacagtactaatgacacaaactaaaataccaacctcaagaggttggaggatctgttgggcccatcctcgaggtgggtactgaagaaccgaaagagacatttcttccgaagacttgaccaacataattttaatagctaaaaaaacaataaactgtttggtttattagttggttatttcagaagaaaaatcttaagttactttggcatgtacacaatgagaaaccaattaccagctccctttatatctggataatttacataaattaggattttaggtaagccatgcacaatagttgactatatattccttgactctttattctatgtaactttatgatttaacacactaatgatttacttaaaacaaaataccaatcactgttgtacactttccaaactaattgagggttgtaattcggaaaagagtccaatagatacaactagacagccttttgaatgtaaaccctctttttaagagaattacaat

4
data/rrna/RRNA_23S/00001_RRNA23S_NC_025524_488.align.fasta Normal file
View File

@@ -0,0 +1,4 @@
>RRNA23S_NC_025524_488 count=1; cluster_weight=1; cluster=RRNA23S_NC_025524_488; cluster_score=1.000000; cluster_center=True;
AAAGCTGGTGGCCTAGCCAGGTTGGTCCCATGGCAATCCATCCCGAACTTGCACATGAAA
CGGCCTGGGAGTGACAATACTTGTACCGAAGGGTACTGGAAAGATAACTTGTTGCCAGCA
TT

Some files were not shown because too many files have changed in this diff Show More