PhyloSkims/annotate
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

First version including the rRNA detector

Browse Source 
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77
Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
This commit is contained in:
Eric Coissac
2015-10-12 07:15:08 -03:00
parent bff0beaeee
commit 01c5880ace
530 changed files with 140563 additions and 19944 deletions
Download Patch File Download Diff File Expand all files Collapse all files

27
data/rrna/RRNA_23S/00001_RRNA23S_NC_012101_60.align.fasta Normal file
View File

@@ -0,0 +1,27 @@
>RRNA23S_NC_012101_60 count=1; cluster_weight=1; cluster=RRNA23S_NC_012101_60; cluster_score=1.000000; cluster_center=True;
ATCGATTAATTCAACTTGCTTTACCACGTATTCGAGATTTTCAAGGTTTAAGCCAACAAA
GTTTTGATGGTCATGGAAACTATACCTTAGGTTTAAAAGAACAATTAATGTTCCCAGAAA
TTGATTACGACAAAATCGAAAAATCTCGAGGGATGGATATTTCAATCGTTACTTCAGCCA
AAAATGATCAAGATGCTTTTTTGCTCTTAAAAGCATTAGGAATGCCATTTAAAGCTGCTT
AAAATTAACTTCTTTTATTTCTTTAAAATTAAAATTTCTTTTACTGTAATTACAAGTTGA
AATATTAAATTTGTTCTTTTGCCGTTTTCGGAGGAAAGAAGTTCTCCCTTTTGCAACTCA
TCGGCTTGAATGTTTTTGTAAAGAGAATAGAAATGAAGTTTACTTTGTTGCTCTTTCTAA
GCAAACTGTATACCCTTCTCTCTGGAGGACCAAAGGGCCAAAGGCCTCCCCCTTCGGGGG
AGGAACGGAGTTCTTCCCACGCGATCCTCCCCCCATTTGCGGGGAGGCCTTCGGCCCTCA
AGGGGAAACCCAGCTCGTCCCCCTTCCACTTTGACCTGGTGTGCTTCAGCGCTTTGACCT
GGTGTGCTTCAGAGCTTTGACCTTTCAGGCCATAAATAAAAGCTCACCCCTTTGAGACCT
TTGGTCCTACGGTCCTTTCAAGTAATAAATAAAGCTCAAGCACACCAGGTCAAAGCGCGC
AAATGAACAAGGTCCTCAAAAGTAAAAACTATCCAGAGGAAACAAGTTTATAAAAACTTA
AAGAAAAAAACGAAGCACAGGGGGGAAATTAAAACGAAAGCTCCAACGATCAAATAATCT
AAAAAACAAAAAATATAAAACTGATATTACTTTAAAAATCTAGAAATAAATATATTACTG
GTTAACAATTCATATGGTGAATTACGCTGTAAGCGATATGCTTACTCGAATCCGAAACGG
AATTCGAGTTAAAAAAACAAAAGTTTCTGTTATTTCAACAAATTTAACAAGAAGTATTGC
TGAAATTTTAAAACGTGAAGGTTTTATTGAAAATTTCGCTACAACTCAAATGACAAAACC
TTCCGTTGGAAATTTAGCAACTACCGGAAATAAAAACTCTACTTTAGATATTTATCTAAA
ATGGTCTCAAAAAGACGGCTTAGGAAAAGCACAAAAAAATGTCTTAACAAACCTAAAGTG
TATTAGTCGTCCAGGTGTTCGCATTTATGCAAATGCCAATAATATTCCCCAAGTTCTTGG
TGGATTAGGCATCACAATTCTATCTACTTCAAAAGGCATCTTAACTGATTATGAAGCAAG
AAATCAAAAAGTTGGTGGAGAAGTTCTATGTATGCTTTGGTAAAACCTATTTAACTAGCC
AATTGCTGAACAACCTTACACTCAAGGGGTTTGAGCGGTTTGACCTGGTGTGCTTAAGCG
CTTGGACCTGGTGTGATTGAGCGGACCTTTTAGGTCATATATTAAGCTCAATCACACCAG
AGCTGGGGGGCCCCTTCAGGCCTTCGGCCCTCAAAGGGGTGAGCGCTTT