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First version including the rRNA detector

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Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77
Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
This commit is contained in:
Eric Coissac
2015-10-12 07:15:08 -03:00
parent bff0beaeee
commit 01c5880ace
530 changed files with 140563 additions and 19944 deletions
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data/rrna/RRNA_23S/00001_RRNA23S_NC_020438_505.align.fasta Normal file
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>RRNA23S_NC_020438_505 count=1; cluster_weight=1; cluster=RRNA23S_NC_020438_505; cluster_score=1.000000; cluster_center=True;
AATCCCGAGTAGCATGGGGCACGTGAAATCCCGTGTGAATCAGCGAGGACCACCTCGTAA
GGCTAAATACTCCTGAGTGACCGATAGCGAAATAGTACCACGAGGGAACGGTGAAAAGAA
CCCCTGTTGGGGAGTGAAATAGAACATGAAACCGTATGCTGACAAGCAGTGGGAGCAAGA
TAAAGCTTGTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTATAGGGAGTGGCTGG
GTTAAGGAGTAAAATCCGGAGCCCAAGCGAAAGCGAGTCTGAATAGGGCGTAAATGGTCA
CTTCTTATGGACCCGAACCCGGGTGATCTATTCATGGCCAGGATGAAGCTTGGGTAACAC
CAAGTGGAGGTCCGAACCGACCGATGTTGAAAAATCGGCGGATGAGCTGTGAATAGGGGA
GAAATTCCAATCGAACTCGGAGCTAGCTGGATCTCCCCGAAATGCGTTGAGGCGCAGCGG
TAACGATGAACAATCTTGGGGTAAAGCTACTGTTTCGATGCGGGCTGCGAAAGTGGTACC
AAGTCGTGGCAAACTCAGAATACAAGATATGTCTTCCGTAAACCAGTGAGACAGTGGGAG
ATAAGTTTCATTGTCAAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCCCTAAATGGTC
ACTAAGTGGAAAAGGATGTGAGAATGCTGAAACAACCAGGAGGTTTGCTTAGAAGCAGCC
ACCCTTCAAAGAGTGCGTAATAGCTCACTGGTAAAGCGTTCTTGCGCCGATAATGGCCGG
GACTAAGTGACCTGCCGAAGCTGTGATATAATTTATTTAGGCAAAAAAATGGCCTTTAAA
GAAATTATAGGTAGGGGAGCGTTCCGCTCTCGGGTGAAGTTTTCACGTAAGTGGGGATGG
ACGAAGCGGAAGTGAGAATGTCGGCTTGAGTAACGAAAACATTGGTGAGAATCCAATGCC
CCGAAAACCTAAGGGTTCCTCCACTAGGTTCGTCCATGGGGGGTTAGTCAGGTCCTAAGA
CTAGGCCAAAAGGCGTCGTCGATGGAAAACAGGTTAATATTCCTGTACTAATTAAAGTAT
GATCTGAGGGACGAAGGAGGCTAAACTAGAACTGTTTTTGGATTGCAGTGGAAGCGTTTA
GACGTTGAGAGATAGAACAAAAGCTATCTTGAGTGGAGACGTAATCCCTATTTGATGGTT
CGCCGTCGAGTAGCTAGTGATGTCATACTTCCAAGAAAAGCTCATACATCTTTATACTTT
AATTACCTGTACCTGAAACCGACACAGGTAGGTTGGTAGAGAATACCAAGGGGCGCGAGA
GAACTCTCTCTAAGGAACTCGGCAAACTGGCCCCGTAACTTCGGAAGAAGGGGCGCCCTC
TTAAAAGGGGGGTCGCAGTGACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCC
GCAAAGTCGTAAGACAATATATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTTAAGGAA
GTTGGTTATTTCGTAAGAAAAAAGCTGACGACCGAAGCCCCGGTGAACGGCGGTCGTAAC
TATAACGATCCTAAGGTAGCGAAATTCATTGTCGAGTAAGTTTCGACCTGCACGAAAGGC
GTAACGATCTGGGCGCTGTCTCGGAGAGAGGCTCGGTGAAATAGACTTGTCCCGTGAAGA
TGCGGACTACCTACACCTGGACAGAAAGACCCTATGAAGCTTGACTGTATCTTGGAATTG
GGTTTGGGCTTTTCTTGCGCAGCCTAGGTGGGAGGCTATGAAGATTACCTTCCGGGGTAT
TTGGAGCCGTCATTGAGAGACCACTCTGGAAGAGCTAGAATCCTAATGGGGATCCTTGAA
TCAGGACCCTTGACAGTTTCAGGTGGGCAGTTTATTTGGGGCGAATGCCTCCTAAAAGGT
AACGGAGGCGTGCAAAGGTTCCCTCAGTCTGGACGGAAATCAGACATTGAGTGTAAAGGC
AAAAGGGAGCTTGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGA
TCCGACGGTGCCGTGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAAC
AGGCTGATCTTCCCCAAGAGTTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTC
ATCACATCCTCGGTCTGTAGTAGGTCCGAAGGGTTGGGCTGTTCGCCCATTAAAGTGGTA
CGTGAGCTGGGTTCAAAACGTCGTGAGACAGTTTGGTCCATATCCGGTGTAGGCGCTAGA
GCATTGAGAGTAGCCTTTCATAGTACGAGAGGACCTGAAAGGACATGCCAATTGTGTACC
AGTTCTCATTCCAATGGGAAACGCTGGGTAGCTACGCATGGATAGATAACTGCTGAAAGC
ATCTAAGTAGGAAGCTAAACTCAAGATGAGTGCTCTCTAAGGCCGCGGCTAGACAAGCCG
TTATATAGGTATCAGGTGTACAGTCAGCAATGGCTTCAGCCGAGATATACTAAAGGCCGT
TTGATTTTGACCTT