PhyloSkims/annotate
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

First version including the rRNA detector

Browse Source 
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77
Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
This commit is contained in:
Eric Coissac
2015-10-12 07:15:08 -03:00
parent bff0beaeee
commit 01c5880ace
530 changed files with 140563 additions and 19944 deletions
Download Patch File Download Diff File Expand all files Collapse all files

48
data/rrna/RRNA_23S/00001_RRNA23S_NC_024168_518.align.fasta Normal file
View File

@@ -0,0 +1,48 @@
>RRNA23S_NC_024168_518 count=1; cluster_weight=1; cluster=RRNA23S_NC_024168_518; cluster_score=1.000000; cluster_center=True;
AGGAGAGCACTCATCTTGAGGTGGGCTTCCTACTTAGATGCTTTCAGCAGTTATCCGCTC
CGCACTTGGCTACCCAGCGTGTACCGTGGGCACGATAACTGGTACACCAGCGGTGCGTCC
CTCCCGGTCCTCTCGTACTAGGGAGAGGCCCTCTCAATGCTCTAGCGCCCGCACCGGATA
TGGACCAAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAAC
AGCCCAACCCTTGGCACGTACTACCGCGCCAGGTGGCGAAGAGCCGACATCGAGGTGCCA
AACCTTCCCGTCGATGTGAACTCTTGGGGAAGATCAGCCTGTTATCCCTAGAGTAACTTT
TATCCGTTGAGCGACGGCCCTTCCACTCGGAACCGTCGGATCACTAAGGCCGACTTTCGT
CCCTGCTCGACGGGTAGGTCTCGCAGTCAAGCTCCCTTCTGCCTTTGCACTCGAAGGCTG
ATTTCCGTCCAGCCTGAGGAAACCTTTGCACGCCTCCGTTACCCTTTGGGAGGCCTACGC
CCCATAGAAACTGTCTACCTGGGACTGTCCCCTAGCCTTCTTCTAGGTCTAAGGTTAGAA
TCCTAGCCCTTCTAGGGTGGTCTCTCATCTTCGGCTCGAGTTTCCCCGGAAAGAAACCGT
CTTCGCCTCCCACCTAGACTGCGCAAGAAGGGCCCAAACCCAATCCCAGGGAACAGTAAA
GCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACAAGTCTATT
TCACCGAGTCTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAAC
TTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGG
GGCTTCGGTCGCCAGCTTCCCCGTATTCGGGTCACCGACTTCCTTAACCTTCCGGCACTG
GGCAGGCGTCAGCCCCCATACGTCGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAA
ACAGTCGCCTGGGCCTGGTCACTGCGGCCTCCTTTTGAAAGGAGGCACCCCTTCTCCCGA
AGTTACGGGGCCATCTTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTC
TCTACCTACCCACCTGTGTCGGTTTCGGGTACAGGTGCCTGCTTGCTTTTTTAAAAGGCG
TAAGAGCTTTTCTTGGGAGCGTGGCATCAGCTACTTCAGCCCCCGTAGGTGCCTAGTACT
CAGGTTTTTTTGCCCTTGAACCGATGACCATTCTTCGGCTAGCTTAGCCTCCTCCGTCCC
TCTTATTGCCAGCAAGAGGCAGTACAGGAATTTTGACCTGTTGTCCATCGACTGCGCCGT
TCGGCCTGATCTTAGGTCCTGACTCACCCTCCGTGGACGAGCCTTGCGGAGGAAACCTTG
GGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCGACATTCTCACTT
CCGCTTCGTCCACACCTGCTTACGCTGATGCTTCTCCCTAATGCGGAACGCTCCCCTACC
GATGTCTTCAAAAGACATCCCACAGCCTCGGCAGACCGCTTAGTCCCGTTCATCTTCGGC
GCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCA
AACCTCCTGGCTGTCTTTGCACTCTCACCTCCTTTGCCACTGAGCGGTCATTTAGGGGCC
TTAGCTGGTGGTCTGGGCTGTTTCCCTTTTGACGATGAAGCTTATCCCCCACCGTCTTAC
TGGCTGACCGCTGGCCGTGCCCAGTATTCAGAGTTTGCCTCGATTTGGTACCGCTTTCGC
AGCCCGCACCGAAACAGTGCTTTACCCCTGGGCAGTCCAGTCAACCGCTGCGCCTCAACG
CATTTCGGGGAGAACCAGCTAGCTCCGAGTTCGAGTGGCATTTCACCCCTAACCACAGCT
CATCCGCTGATTTTTCAACATCAGTCGGTTCGGACCTCCACTTGGCTTCACCCAAGCTTC
ACCCTGGCCATGGATAGATCACCCGGGTTCGGGTCCATAAGCAGTGACATTCGCCCGAAA
AAGACTCGCTTTCGCTACGGCTCCGGAAAACCTTAACCAGGCCACTGCCTATAAGTCGCC
GGCTCATTCTTCAACAGGCACGCGGTCAGAGATCCCATTCTCCTCCCACTGCTTGGAGGC
TTACGGTTTCATGTTCTATTTCACTCCCCGATGGGGGTTCTTTTCACCTTTCCCTCACGG
TACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCTTACGAGGTGGTCCTCGCTGATT
CACACGGGATTTCACGTGCCCCATGCTACTCGGGTTAGAGCGTAAGCTAGAATTACTTTC
GGCTACTGGACTATCACCATCTAAGGTGCAGGACTCAGCTGCTTCGCCTAGGAACTCTTT
GCTCGTGTCGCCCTCCCACAACCCCGCTTATCCAAGAAGGAAGCGGTTTAGGCTGTTCCC
ATTTCGCTCGCCACTACTCAGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGAT
GTTTCAGTTCACCAGGTTGTCTCTTTCCTGCCTATGTATTCAGCAGGTAGTCTTATAGGT
TCCCCTATTCGGGCATCTCCGGATCTGTGCTTGTTCTCAGCTCCCCGAAGCATTTCGTCG
CTTGCTACGCCCTTCGTCGTCTCTGGGTGCCTAGGTATCCACCATAAGCCCTTATTCATT
TGAA