Switch to a swissprot based reference database for CDS annotation
Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a
This commit is contained in:
75
data/cds/sp_chlorodb/RPS12/rps12.fst
Normal file
75
data/cds/sp_chlorodb/RPS12/rps12.fst
Normal file
@@ -0,0 +1,75 @@
|
||||
>RR12B_OLIPU SP_AC=A4QJX7; EMBL_AC=BAF49985.1; gene=rps12;
|
||||
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYSTITPKKPNSALRKVARVRLTS
|
||||
GFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGV
|
||||
KKPK
|
||||
>RR12B_POPTR SP_AC=A4GYN8; EMBL_AC=ABO36729.1; gene=rps12;
|
||||
MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYSGSKGDLSVNFSTITPKKPNSA
|
||||
LRKVARVRLTSGFEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVK
|
||||
DRQQGRSQYGVKKPK
|
||||
>RR12_ADICA SP_AC=Q85FG4; EMBL_AC=AAP29455.2; gene=rps12;
|
||||
MPTNQQLIRKARQRLESGTKSPALRGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSK
|
||||
FEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDAVGVKDRKKGRSSALQS
|
||||
IVATRIIATIPYQLF
|
||||
>RR12_AGRST SP_AC=A1E9Y6; EMBL_AC=ABK79639.1; gene=rps12;
|
||||
MPTVKQLIRNARQPIRNARKTAALKGCPQRRGTCARVYTINPKKPNSALRKVARVRLTSG
|
||||
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGTLDAVAVKNRQQGRSKYGVK
|
||||
KPKK
|
||||
>RR12_ANGEV SP_AC=A2T357; EMBL_AC=ABG79660.1; gene=rps12;
|
||||
MSTIQQLIRNTRQPIEDRTKSPALRGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRKQGRSQYGVK
|
||||
KPK
|
||||
>RR12_ANTAG SP_AC=Q85BW6; EMBL_AC=BAC55469.1; gene=rps12;
|
||||
MPTIQQLIRSKRQLVKSRTKSPALQGCPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSG
|
||||
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDTVGVKDRKQGRSKYGVK
|
||||
KPK
|
||||
>RR12_CHAGL SP_AC=Q8MA18; EMBL_AC=AAM96595.1; gene=rps12;
|
||||
MPTIQQLIRNRREPIENRTKSPALRSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDSVGVKDRHQGRSKYGAK
|
||||
KPK
|
||||
>RR12_CHAVU SP_AC=Q1ACP3; EMBL_AC=ABA61976.1; gene=rps12;
|
||||
MTTIQQLIRKKRKPIENKTKSPALRNCPQRRGVCIRVYTTTPKKPNSALRKVARVRLTSS
|
||||
FEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDTIGVKDRCQGRSKYGTK
|
||||
RPK
|
||||
>RR12_CHLAT SP_AC=Q19V72; EMBL_AC=ABD62244.2; gene=rps12;
|
||||
MPTIQQLIRSQRKKVEKKTKSPALRGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGILDTAGVKDRSQGRSKYGVK
|
||||
RPK
|
||||
>RR12_HELAN SP_AC=Q1KXY0; EMBL_AC=ABD47206.1; gene=rps12;
|
||||
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG
|
||||
FEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAL
|
||||
>RR12_HUPLU SP_AC=Q5SD27; EMBL_AC=AAT80701.2; gene=rps12;
|
||||
MPTIQQLIRNQRQPVENRTKSPALQGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEITAYIPGIGHNSQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKNRQQGRSKYGVK
|
||||
KPK
|
||||
>RR12_JASNU SP_AC=Q06RA8; EMBL_AC=ABG74674.1; gene=rps12;
|
||||
MPTINQLIRNTRQSIRNVKKSPALQGCPQRRGICTRVYTINPKKPNSATRKVARVRLTSG
|
||||
FEITAYIPGIGHNSQEHSSVLVRGGRVPDLPGVKYHIVRGTLDAVGVKDRQQGRSKYGVK
|
||||
KPKKKK
|
||||
>RR12_MARPO SP_AC=P06368; EMBL_AC=CAA27297.1; gene=rps12;
|
||||
MPTIQQLIRNKRQPIENRTKSPALKGCPQRRGVCTRVYTTTPKKPNSALRKIARVRLTSG
|
||||
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIIRGTLDAVGVKDRQQGRSKYGVK
|
||||
KSK
|
||||
>RR12_MESVI SP_AC=Q9MUP2; EMBL_AC=AAF43858.1; gene=rps12;
|
||||
MPTIQQLIRSERKRVYNKTKSPALKACPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGILDTAGVKDRAQSRSKYGVK
|
||||
RS
|
||||
>RR12_PELHO SP_AC=Q06FR2; EMBL_AC=ABI18376.1; gene=rps12;
|
||||
MPTSNQLLRNSRQPVRKTKKTPALRGCPQRRGRCSKVYIINPKKPNSGNRKVARVRLTSG
|
||||
FEITAYIPGVGHNVQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAAGVKDRKQGRSKYGVK
|
||||
KPK
|
||||
>RR12_PINTH SP_AC=P52762; EMBL_AC=BAA04338.1; gene=rps12;
|
||||
MPTIQQLIRNARQPIENRKKSPALRGCPQRRGVCARVYTITPKKPNSALRKVARVRLTSG
|
||||
FEITAYIPGIDHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAAEVKDRQQGRSKYGVK
|
||||
KQK
|
||||
>RR12_SPIMX SP_AC=P42344; EMBL_AC=AAB01590.1; gene=rps12;
|
||||
MPTIQQLIRNKRQAAENKTKSPALQRSPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDVVGVKDRRKGRSKYGVK
|
||||
RPK
|
||||
>RR12_STAPU SP_AC=Q32S12; EMBL_AC=AAX45751.1; gene=rps12;
|
||||
MPTIQQLIRNSRQPAENRTKSPALRACPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEVTAYIPGIGHNLQEHSVILVRGGRVKDLPGVRYHIVRGTLDAVGVKDRRQGRSKYGVK
|
||||
RPK
|
||||
>RR12_ZYGCR SP_AC=Q32RQ9; EMBL_AC=AAX45866.1; gene=rps12;
|
||||
MPTIQQLIRNTRQPTQNRTKSPALKACPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSG
|
||||
FEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGTLDAVGVKDRHQGRSKYGVK
|
||||
RPK
|
BIN
data/cds/sp_chlorodb/RPS12/rps12.fst.phr
Normal file
BIN
data/cds/sp_chlorodb/RPS12/rps12.fst.phr
Normal file
Binary file not shown.
BIN
data/cds/sp_chlorodb/RPS12/rps12.fst.pin
Normal file
BIN
data/cds/sp_chlorodb/RPS12/rps12.fst.pin
Normal file
Binary file not shown.
BIN
data/cds/sp_chlorodb/RPS12/rps12.fst.psq
Normal file
BIN
data/cds/sp_chlorodb/RPS12/rps12.fst.psq
Normal file
Binary file not shown.
Reference in New Issue
Block a user