Switch to a swissprot based reference database for CDS annotation

Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f
Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a
This commit is contained in:
2022-02-16 22:50:17 +01:00
parent 90b3ee9b04
commit 831669433e
644 changed files with 25433 additions and 485597 deletions

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>YCX2_ANTAG SP_AC=Q85BU5; EMBL_AC=BAC55474.1; gene=ORF27;
MLFKKISKFVGWLSGSSVGSITSKTHE

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>T214B_ANTAG SP_AC=Q85BK9; EMBL_AC=BAC55508.1; gene=ORF473;
MNKCYLKYLLQSWTPRYSIRSNTRNFLQEILSFNEPQNLTESNWKRWLQCFNRYNLPLQM
WYKISPQQWKSQVSKHWKDRNHFSKNSHRKNQSLLLYKQKEFYSIFASDSSSRYTREIER
LNKRYRCNLFLYSYLDHTKSLNMRRFPVWRSEERETILNNRIKEIRNFHLFNNERNNENS
INSLGKEKNLFFRSNLVLWLVPEFLGKKNIHKTEFIPVFYPSLVRERGEKTIQNRKSLRE
RERHESIRQWRWESKDLEERFKELGDMASVMTFIQNKKNIISLSVKMREDLDLFRLLFRR
DIGLNRLTINSEHRLPRVLDDEILMCKIITTLLKFKSRFQERLDFNIFDESISRIRKFES
ERKTISKSFSLEEILLPKRCKELRILNSLYSKYDINEEAKFDEGSLGKNRGSNEKLVRIN
EEFNTNVNQSIKRFLWPSYRLEDLACMNRFWFNTSNGSRFSMLRIRLYLLIHD

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>YCX1_ANTAG SP_AC=Q85BV1; EMBL_AC=BAC55431.1; gene=ORF51;
MNLIFGFVQLFLYHPLFLLLLYIYLVLFIPLKGAINITNIFPTLLKSIGIK

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>YCF68_EUCGG SP_AC=Q49KT9; EMBL_AC=AAX21087.1; gene=orf134;
MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKPLLRRIDGAIQV
RSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYLSSTGLGSASMGK
>YCF68_SACOF SP_AC=Q6ENQ5; EMBL_AC=BAD27370.1; gene=orf134;
MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHP
LSVYGELSLEHRLRFVLNGKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGL
EKAVINRTSLILPS

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>YCF72_SACOF SP_AC=Q6ENS0; EMBL_AC=BAD27385.1; gene=orf137;
MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR
TSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFLSKNP
FPNCTSFFQSIRLSRCI

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>YCF73_SACOF SP_AC=Q6ENR2; EMBL_AC=BAD27376.1; gene=orf173;
MTKDETLLVFTLVVSSVSIFLFGILLFMVLISATRDFRERTKSKLVKIMIWAGIVVITFA
IAVRIYPIFIFLLKERIKPLVEALYDKLPWIWEVSLSRYWDRLIDFLDRYLWACAQRIQT
GIRKQKGEFVVTFSCRVKKRLYARAIEVGIHLSLLSNLFWILKTTLAVGYRLL

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>RPAL2_PELHO SP_AC=Q06FN4; EMBL_AC=ABI17339.1; gene=orf332;
MSNPNNGAEWQQVEADQLDSGLYYGRFALSPLTAKQASLLKKGLPEALLTEILCLRFTHA
KIQNECVNLMNIVGIQESLDEILKNFGKIILTGKLEEFVGKGPFVAILDVRGPLNAMAVD
IELPPGIKVEIETQHIATITEPIPFVVELKIELVSSTSKGETGITDEEGFSIDPNPPIQK
VDTSIQCYDYQGEPFQTLFLDIWTDRTIHPHEALAQASRKIFGLLSLVFQAEYFQYNELE
NGLRYGKFCLYPMTKEQFQWIQTALNEALALDMSGESKHEGPVTDEEGDSIDPTFTPVQK
WDITMNSYQYSGETFQGLLSRF

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>RPAL3_PELHO SP_AC=Q06FN6; EMBL_AC=ABI17337.1; gene=orf365;
MDFSEFSLEITNNKNFADWDYVECKYFHKDFAYGRFALSPLTAKESRLLKKGLFEALLTE
ILCLRFTHAKIQNECVNLMNIVGIQESLDEILKNFGKIILTGKLEEFVGKGPFVAILDVR
GPLNAMAVDIELPPGIKVEIETQHIATITEPIPFVVELRIELVSSTSKGETGITDEEGFS
IDPNPPIRKVNSSIQGYEYGGQTFERLSIEMLTSLPIIPNEALLLGSMKIMNLFQIVLQA
KYLDYKELEKGIHVGVFCVSALRAEQSKWIKTILEDALYMVGGRKHQGPLTDEEDDSIDS
NFTPVQNLDCRIESYEEEGQTFQRLFLEIWTKSPTEPQEALWEASAKILELFSLFLQTSK
ENEKD

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>RPAL1_PELHO SP_AC=Q06FN2; EMBL_AC=ABI17341.1; gene=orf574;
MTNNKNFADWDSLECKDLHNDLLYGRFALSPLTAKESRLLKKGLREALLTGILCLRFTHA
KIQNACKNLNLMNIVGIQESLDEILKNFGKIILTGKLEEFVGKGPFVAILDVRGPLNAMA
VDIELPPGIKVEIETQHIATITEPIPFVVELRIELVSSTSKGETGITDEEGFSIDPNPPI
QKVNSSIQGYEYGGQTFQTLFIEILSTSPTVPNKALLLVSMKIMNLFQIVLQAKYLDYKE
LEKGIHVGVFCVSALRAEQSKWIKTILEDALYMVGGRKHQGPLTDEEDDSIDSNFTPVQN
LDCRIESYEEEGQTFQRLFLEIWTKSPTEPQEALWEASAKILELFSLFLQTSKENEKDLK
QIIKDWTENKRKHQEVLRLLDSEESGSIGWITKMKLAYMHMTLLSMNAMYILLVHRLKPD
YDRYNSITDQIVQELRASLNKLREIQKGEYSEQRILVHSIAQEIEAALQKYETTYKLDDF
VIKAKKDMITMIWDKERADLESSLIRWESDEDYLNLKKMNPVEMDRSFAELQYQETLRKE
QDEQSSQQQKDQMEKRRWERQNRERERKRGNREF

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>YCF70_SACOF SP_AC=Q6ENX7; EMBL_AC=BAD27279.1; gene=orf81;
MVLYALFYVFLVLFIFFDSFKQESNKLELSGKEERKLGNGGDRLTRDFLDPLYEEFEESS
SESSDVNFHQVNLSIRICFSF
>YCF70_WHEAT SP_AC=Q9XPS5; EMBL_AC=BAA78037.1; gene=orf81;
MALILYAIFYLFLVLLNFFHSFKQESNKLELSQWKKGERGKC

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>YCF76_SACOF SP_AC=Q6ENQ6; EMBL_AC=BAD27371.1; gene=orf85;
MKKILFSMFYSILVGEEPDSVFLKKEGKQNQVKMIWIAPSSCAKDLTISEGTGATFLFNF
HSRVSICFHALFLRPRNMKWTNSFS

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