Switch to a swissprot based reference database for CDS annotation
Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a
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2
data/cds/sp_chlorodb/dust/ORF27.fst
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data/cds/sp_chlorodb/dust/ORF27.fst
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>YCX2_ANTAG SP_AC=Q85BU5; EMBL_AC=BAC55474.1; gene=ORF27;
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MLFKKISKFVGWLSGSSVGSITSKTHE
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data/cds/sp_chlorodb/dust/ORF27.fst.phr
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data/cds/sp_chlorodb/dust/ORF27.fst.phr
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data/cds/sp_chlorodb/dust/ORF27.fst.pin
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data/cds/sp_chlorodb/dust/ORF27.fst.pin
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data/cds/sp_chlorodb/dust/ORF27.fst.psq
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data/cds/sp_chlorodb/dust/ORF27.fst.psq
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data/cds/sp_chlorodb/dust/ORF473.fst
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data/cds/sp_chlorodb/dust/ORF473.fst
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>T214B_ANTAG SP_AC=Q85BK9; EMBL_AC=BAC55508.1; gene=ORF473;
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MNKCYLKYLLQSWTPRYSIRSNTRNFLQEILSFNEPQNLTESNWKRWLQCFNRYNLPLQM
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WYKISPQQWKSQVSKHWKDRNHFSKNSHRKNQSLLLYKQKEFYSIFASDSSSRYTREIER
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LNKRYRCNLFLYSYLDHTKSLNMRRFPVWRSEERETILNNRIKEIRNFHLFNNERNNENS
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INSLGKEKNLFFRSNLVLWLVPEFLGKKNIHKTEFIPVFYPSLVRERGEKTIQNRKSLRE
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RERHESIRQWRWESKDLEERFKELGDMASVMTFIQNKKNIISLSVKMREDLDLFRLLFRR
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DIGLNRLTINSEHRLPRVLDDEILMCKIITTLLKFKSRFQERLDFNIFDESISRIRKFES
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ERKTISKSFSLEEILLPKRCKELRILNSLYSKYDINEEAKFDEGSLGKNRGSNEKLVRIN
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EEFNTNVNQSIKRFLWPSYRLEDLACMNRFWFNTSNGSRFSMLRIRLYLLIHD
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data/cds/sp_chlorodb/dust/ORF473.fst.phr
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data/cds/sp_chlorodb/dust/ORF473.fst.phr
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data/cds/sp_chlorodb/dust/ORF473.fst.pin
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data/cds/sp_chlorodb/dust/ORF473.fst.pin
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data/cds/sp_chlorodb/dust/ORF473.fst.psq
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data/cds/sp_chlorodb/dust/ORF473.fst.psq
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data/cds/sp_chlorodb/dust/ORF51.fst
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data/cds/sp_chlorodb/dust/ORF51.fst
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>YCX1_ANTAG SP_AC=Q85BV1; EMBL_AC=BAC55431.1; gene=ORF51;
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MNLIFGFVQLFLYHPLFLLLLYIYLVLFIPLKGAINITNIFPTLLKSIGIK
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data/cds/sp_chlorodb/dust/ORF51.fst.phr
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data/cds/sp_chlorodb/dust/ORF51.fst.phr
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data/cds/sp_chlorodb/dust/ORF51.fst.pin
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data/cds/sp_chlorodb/dust/ORF51.fst.pin
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data/cds/sp_chlorodb/dust/ORF51.fst.psq
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data/cds/sp_chlorodb/dust/ORF51.fst.psq
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data/cds/sp_chlorodb/dust/orf134.fst
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data/cds/sp_chlorodb/dust/orf134.fst
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>YCF68_EUCGG SP_AC=Q49KT9; EMBL_AC=AAX21087.1; gene=orf134;
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MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTGFETKPLLRRIDGAIQV
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RSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQCMDSYLSSTGLGSASMGK
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>YCF68_SACOF SP_AC=Q6ENQ5; EMBL_AC=BAD27370.1; gene=orf134;
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MAYSSCLNRSLKPNKLLLRRIDGAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHP
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LSVYGELSLEHRLRFVLNGKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFHAFPGGL
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EKAVINRTSLILPS
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data/cds/sp_chlorodb/dust/orf134.fst.phr
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data/cds/sp_chlorodb/dust/orf134.fst.phr
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data/cds/sp_chlorodb/dust/orf134.fst.pin
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data/cds/sp_chlorodb/dust/orf134.fst.pin
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data/cds/sp_chlorodb/dust/orf134.fst.psq
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data/cds/sp_chlorodb/dust/orf134.fst.psq
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data/cds/sp_chlorodb/dust/orf137.fst
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data/cds/sp_chlorodb/dust/orf137.fst
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>YCF72_SACOF SP_AC=Q6ENS0; EMBL_AC=BAD27385.1; gene=orf137;
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MGAFPSPPPWGWSTGFITTPLTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKR
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TSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSFLSKNP
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FPNCTSFFQSIRLSRCI
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data/cds/sp_chlorodb/dust/orf137.fst.phr
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data/cds/sp_chlorodb/dust/orf137.fst.phr
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data/cds/sp_chlorodb/dust/orf137.fst.pin
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data/cds/sp_chlorodb/dust/orf137.fst.pin
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data/cds/sp_chlorodb/dust/orf137.fst.psq
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data/cds/sp_chlorodb/dust/orf137.fst.psq
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data/cds/sp_chlorodb/dust/orf173.fst
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data/cds/sp_chlorodb/dust/orf173.fst
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>YCF73_SACOF SP_AC=Q6ENR2; EMBL_AC=BAD27376.1; gene=orf173;
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MTKDETLLVFTLVVSSVSIFLFGILLFMVLISATRDFRERTKSKLVKIMIWAGIVVITFA
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IAVRIYPIFIFLLKERIKPLVEALYDKLPWIWEVSLSRYWDRLIDFLDRYLWACAQRIQT
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GIRKQKGEFVVTFSCRVKKRLYARAIEVGIHLSLLSNLFWILKTTLAVGYRLL
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data/cds/sp_chlorodb/dust/orf173.fst.phr
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data/cds/sp_chlorodb/dust/orf173.fst.phr
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data/cds/sp_chlorodb/dust/orf173.fst.pin
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data/cds/sp_chlorodb/dust/orf173.fst.pin
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data/cds/sp_chlorodb/dust/orf173.fst.psq
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data/cds/sp_chlorodb/dust/orf173.fst.psq
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data/cds/sp_chlorodb/dust/orf332.fst
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data/cds/sp_chlorodb/dust/orf332.fst
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>RPAL2_PELHO SP_AC=Q06FN4; EMBL_AC=ABI17339.1; gene=orf332;
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MSNPNNGAEWQQVEADQLDSGLYYGRFALSPLTAKQASLLKKGLPEALLTEILCLRFTHA
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KIQNECVNLMNIVGIQESLDEILKNFGKIILTGKLEEFVGKGPFVAILDVRGPLNAMAVD
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IELPPGIKVEIETQHIATITEPIPFVVELKIELVSSTSKGETGITDEEGFSIDPNPPIQK
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VDTSIQCYDYQGEPFQTLFLDIWTDRTIHPHEALAQASRKIFGLLSLVFQAEYFQYNELE
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NGLRYGKFCLYPMTKEQFQWIQTALNEALALDMSGESKHEGPVTDEEGDSIDPTFTPVQK
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WDITMNSYQYSGETFQGLLSRF
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data/cds/sp_chlorodb/dust/orf332.fst.phr
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data/cds/sp_chlorodb/dust/orf332.fst.phr
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data/cds/sp_chlorodb/dust/orf332.fst.pin
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data/cds/sp_chlorodb/dust/orf332.fst.pin
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data/cds/sp_chlorodb/dust/orf332.fst.psq
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data/cds/sp_chlorodb/dust/orf332.fst.psq
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data/cds/sp_chlorodb/dust/orf365.fst
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data/cds/sp_chlorodb/dust/orf365.fst
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>RPAL3_PELHO SP_AC=Q06FN6; EMBL_AC=ABI17337.1; gene=orf365;
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MDFSEFSLEITNNKNFADWDYVECKYFHKDFAYGRFALSPLTAKESRLLKKGLFEALLTE
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ILCLRFTHAKIQNECVNLMNIVGIQESLDEILKNFGKIILTGKLEEFVGKGPFVAILDVR
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GPLNAMAVDIELPPGIKVEIETQHIATITEPIPFVVELRIELVSSTSKGETGITDEEGFS
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IDPNPPIRKVNSSIQGYEYGGQTFERLSIEMLTSLPIIPNEALLLGSMKIMNLFQIVLQA
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KYLDYKELEKGIHVGVFCVSALRAEQSKWIKTILEDALYMVGGRKHQGPLTDEEDDSIDS
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NFTPVQNLDCRIESYEEEGQTFQRLFLEIWTKSPTEPQEALWEASAKILELFSLFLQTSK
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ENEKD
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data/cds/sp_chlorodb/dust/orf365.fst.phr
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data/cds/sp_chlorodb/dust/orf365.fst.phr
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data/cds/sp_chlorodb/dust/orf365.fst.pin
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data/cds/sp_chlorodb/dust/orf365.fst.pin
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data/cds/sp_chlorodb/dust/orf365.fst.psq
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data/cds/sp_chlorodb/dust/orf365.fst.psq
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data/cds/sp_chlorodb/dust/orf574.fst
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data/cds/sp_chlorodb/dust/orf574.fst
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>RPAL1_PELHO SP_AC=Q06FN2; EMBL_AC=ABI17341.1; gene=orf574;
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MTNNKNFADWDSLECKDLHNDLLYGRFALSPLTAKESRLLKKGLREALLTGILCLRFTHA
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KIQNACKNLNLMNIVGIQESLDEILKNFGKIILTGKLEEFVGKGPFVAILDVRGPLNAMA
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VDIELPPGIKVEIETQHIATITEPIPFVVELRIELVSSTSKGETGITDEEGFSIDPNPPI
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QKVNSSIQGYEYGGQTFQTLFIEILSTSPTVPNKALLLVSMKIMNLFQIVLQAKYLDYKE
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LEKGIHVGVFCVSALRAEQSKWIKTILEDALYMVGGRKHQGPLTDEEDDSIDSNFTPVQN
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LDCRIESYEEEGQTFQRLFLEIWTKSPTEPQEALWEASAKILELFSLFLQTSKENEKDLK
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QIIKDWTENKRKHQEVLRLLDSEESGSIGWITKMKLAYMHMTLLSMNAMYILLVHRLKPD
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YDRYNSITDQIVQELRASLNKLREIQKGEYSEQRILVHSIAQEIEAALQKYETTYKLDDF
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VIKAKKDMITMIWDKERADLESSLIRWESDEDYLNLKKMNPVEMDRSFAELQYQETLRKE
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QDEQSSQQQKDQMEKRRWERQNRERERKRGNREF
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data/cds/sp_chlorodb/dust/orf574.fst.phr
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data/cds/sp_chlorodb/dust/orf574.fst.phr
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data/cds/sp_chlorodb/dust/orf574.fst.pin
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data/cds/sp_chlorodb/dust/orf574.fst.pin
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data/cds/sp_chlorodb/dust/orf574.fst.psq
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data/cds/sp_chlorodb/dust/orf574.fst.psq
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data/cds/sp_chlorodb/dust/orf81.fst
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data/cds/sp_chlorodb/dust/orf81.fst
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>YCF70_SACOF SP_AC=Q6ENX7; EMBL_AC=BAD27279.1; gene=orf81;
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MVLYALFYVFLVLFIFFDSFKQESNKLELSGKEERKLGNGGDRLTRDFLDPLYEEFEESS
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SESSDVNFHQVNLSIRICFSF
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>YCF70_WHEAT SP_AC=Q9XPS5; EMBL_AC=BAA78037.1; gene=orf81;
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MALILYAIFYLFLVLLNFFHSFKQESNKLELSQWKKGERGKC
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data/cds/sp_chlorodb/dust/orf81.fst.phr
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data/cds/sp_chlorodb/dust/orf81.fst.phr
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data/cds/sp_chlorodb/dust/orf81.fst.pin
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data/cds/sp_chlorodb/dust/orf81.fst.pin
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data/cds/sp_chlorodb/dust/orf81.fst.psq
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data/cds/sp_chlorodb/dust/orf81.fst.psq
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data/cds/sp_chlorodb/dust/orf85.fst
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data/cds/sp_chlorodb/dust/orf85.fst
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>YCF76_SACOF SP_AC=Q6ENQ6; EMBL_AC=BAD27371.1; gene=orf85;
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MKKILFSMFYSILVGEEPDSVFLKKEGKQNQVKMIWIAPSSCAKDLTISEGTGATFLFNF
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HSRVSICFHALFLRPRNMKWTNSFS
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data/cds/sp_chlorodb/dust/orf85.fst.phr
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data/cds/sp_chlorodb/dust/orf85.fst.phr
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data/cds/sp_chlorodb/dust/orf85.fst.pin
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data/cds/sp_chlorodb/dust/orf85.fst.pin
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data/cds/sp_chlorodb/dust/orf85.fst.psq
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data/cds/sp_chlorodb/dust/orf85.fst.psq
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