Switch to a swissprot based reference database for CDS annotation

Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f
Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a

data/cds/sp_chlorodb/shell/chlN.fst

@@ -0,0 +1,117 @@
+>CHLN_ADICA SP_AC=Q85FG6; EMBL_AC=AAP29450.2; gene=chlN;
+MKTPETLAFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFLQNALGVMIFAE
+PRYAMAELEEGDISAQLNDQKELEKICLQIRDDRNPSVIIWIGTCTTEIIKMDLEGIAPK
+LEKQIGIPIIVARANGLDYAFTQGEDTVLAAMAHRCPEYKHCTTNLKNRTDEMARIDNHT
+TNKSPFEASKLTRFNLVLFGSLSSSIASQLNLELKRQSISVSGWLPSQKYEELPGLGEGI
+YVCGVNPFLSRTATTLMRRRKCKLVGAPFPIGPDGTRAWIEKICSVFDIKSYGLENRESE
+IWENVKDYIQVINGKSVFFMGDNLLEISLARFLIRCGMIVYEVGIPYMDRRYQAAELLFL
+QHTCRKMKTPLPRIVEKPDNYGQIQRMHELKPHLAITGMAHANPLEARNIDTKWSVEFTF
+AQIHGFSSVRDILELVTRPLRRRGVITPGFRSLSKQTTGD
+>CHLN_ANGEV SP_AC=A2T391; EMBL_AC=ABG79658.1; gene=chlN;
+MNTFEILTFECETGNYHTFCPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNALGVMIFAE
+PRYAMAELEEGDISAQLNDHEELKRLCLHIKKDRNPSVIVWIGTCTTEIIKMDLEGIAPK
+VETEIGIPIVVARANGLDYAFTQGEDTVLAAITHRCPEYKSWVDEEDGTEKKVLSVYSER
+NRDETFKSPNHPPLVLFGSVPSTVASQLDSELKRQSIRVSGWLPAQRYTELPSLGEEVYV
+CGVNPFLSRTATTLMRRRKCKLIGAPFPIGPDGTRAWIEKICSVFGIKPQGLEERETQIW
+NNLKDYLDLLRGKSVFFMGDNLLEVSLARFLIRCGMIVYEIGIPYMDKRYQAAELSLLQD
+TCKKMHIPMPRIVEKPDNYNQIQRMRELQPDLAITGMAHANPLEARGINTKWSVEFTFAQ
+IHGFTNAKDVLELVTRPLRRNNSLEHLGWTNLLQPTII
+>CHLN_ANTAG SP_AC=Q85A72; EMBL_AC=BAC55510.1; gene=chlN;
+MSIQISETLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAQLNDYEELKRLCFQIKKDRNPSVIIWIGTCTTEIIKMDLEGMA
+PKLEVELGVPIVVARANGLDYAFTQGEDTVLAAMAHRCPERDLLIDENKVIQNQTIQNIF
+SLFSQKKKEETLKYLELKNHPPLVLFGSLPSTVASQLSLELKRQSIQVSGWLPTQRYTDL
+PSLGDGVYVCGVNPFLSRTATTLIRRRKCKLIGAPFPIGPDGTRAWIEKISSVFGIKTKG
+LEEREQQVWQSLKNYLNLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYMDKRYQ
+AAELALLRNTCREMCTPMPRIVEKPDNYNQIQRMRELQPDLAITGMAHANPLEARGINTK
+WSVEFTFAQIHGFTNAKDVLELVTRPLRRNNSLEDLGWTNLIKKDNKIKVI
+>CHLN_CHAGL SP_AC=Q8LW53; EMBL_AC=AAM96590.1; gene=chlN;
+MNSAISDTLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAQLNDYQELKNICLQIKKDRNPSVIVWIGTCTTEIIKMDLEGMA
+PRLEAEIGIPIVVARANGLDYAFTQGEDTVLAAMAQRCPEISVASKQNQPMGSAFSQTLK
+VSNQQDHPPLVLFGSLPSTVASQLDLELKRQSIEVSGWLPSQRYTDLPLLGEGVHVCGVN
+PFLSRTATTLMRRRKCKLISAPFPIGPDGTRAWIEKICSVFGIQPQGLEERENQIWDGLK
+DYIDLVRGKSVFFMGDNLLEVSLARFLIRCGMVVYEIGIPYMDKRYQAAELALLQKTCQD
+MNVPMPRIVEKPDNYNQVQRMRELQPDLAITGMAHANPLEARGISTKWSVEFTFAQIHGF
+TNARDILELVTRPLRRNHSLQGLGWSSLVKEQNQLIPS
+>CHLN_CHAVU SP_AC=Q1ACE1; EMBL_AC=ABA61904.1; gene=chlN;
+MLEKISDTLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAQLNDYEELKRLCIQIKKDRNPSVIVWIGTCTTEIIKMDLEGMA
+PKLEAEIGIPIVVARANGLDYAFTQGEDTVLAAIVHRCPDYKLQNKTDLTDNDIQEDATR
+FSFLKLRKNNIRSISATNSHPPLVLFGSLPTTVSSQLNLELKRNQIEVSGWLPTQRYTDL
+PSLGEGVYVCGVNPFLSRTATTLMRRKKCKLISAPFPIGPDGTRAWIEKICNVFNIQPTG
+LEERENKIWDGLEDYLDLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYMDKRYQ
+AAELMLLQKTCEMMNVPLPRIVEKPDNYNQIQRIRELKPDLAITGMAHANPLEARGISTK
+WSVEFTFAQIHGFTNARDILELVTRPLRRNQSLHELGWNNLVKVNSQ
+>CHLN_CHLAT SP_AC=Q19V53; EMBL_AC=ABD62180.2; gene=chlN;
+MSAMTSDTLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAQLNDYQELKRLCTQIKQDRNPSVIVWIGTCTTEIIKMDLEGMA
+PKIEQEIKIPIVVARANGLDYAFTQGEDTVLAAMVERCPGETKLSEQSQDKGSSKQNFSS
+TKGLFSILNFNKKAAADTQPQEAEDYIDHPPLVLFGSLPGPVVSQLTLELKRQKIKVSGW
+LPSQRYTDLPAVGKGVYVCGVNPFLSRTATILMRRRKCKLIGAPFPIGPDGTRAWVEKIC
+SVFNVEPIGLAERENKIWEGLEDYLQLVRGKSVFFMGDNLLEVSLARFLTRCGMIVYEIG
+IPYMDKRYQAAELALLEKTCQEMGVPMPRIVEKPDNYNQIQRIRELQPDLAITGMAHANP
+LEARGISTKWSVEFTFAQIHGFTNARDILELVTRPLRRNNSLEGLGWTSLVKEGVLSN
+>CHLN_CYCTA SP_AC=A6H5Q1; EMBL_AC=BAF65017.1; gene=chlN;
+MSAKISETLTFECETGNYHTFCPISCVSWLYQKIEDSFFLMVGTKTCGYFLQNTLGVMIF
+AEPRYAMAELEEGDISAQLNDYEELKRLCIRIKKDRDPNVIIWIGTCTTEIIKMDLEGMA
+PKLESEIGIPIIVARANGLDHAFTQGEDTVLAAMAHRCLEQRLFVRERNGTIQKFPPPLE
+KEGEFIEYGDHPSLALFGSLPSNVASQLSPELRRQSVKVSGWLPAQRYTHLPSLGNGVYV
+CGINPFLSRTAATLVRRERCRLIGAPFPIGPDGTRAWIEKICPVFDIETQGLEEREKQIW
+ESLKDYISLVHGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYMDKRYQAAELALLRD
+TCIKMCVPIPRIVEKPDNYNQLRRIRELQPDLAITGMAHADPLEARGMNTKWSVEFTFAQ
+IHGFANARNVLELVTRPLRCNDNLEDLGRTTLVK
+>CHLN_HUPLU SP_AC=Q5SCY8; EMBL_AC=AAT80754.1; gene=chlN;
+MAVEISETLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFSQNSLGVMIF
+AEPRYAMAELEEGDIPAQLNDYGESKRLCIQIIKNRNPSVIIWIGTCTTEIIKMDLEGIA
+PKLEAEIGVPIVVARANGLDYAFTQGEDTVLAAVTHRCPERKSSVGGQNQPVQDEELQEF
+FSFLPPNDENVKKTVVGSQKNPPLVLFGSLPSAVAHQPSSELKRQSIQISGWIPTERYNN
+LPSLGDEVYVCGVNPFLSRTATSLMRRRKCQLIGAPFPIGPDGTRAWIEKICSVFGIEAQ
+GLEKREKKVWDSLENYLDQVRGKSVFFMGDNPLEISLARFLIRCGMTVYEIGIPYMDKRY
+QAAELYFLQNTCRDMRIPMPRIVEKPDNYNQLQRMYELQPDLVFTGMAHANPLQARGINT
+RWSIEFTFAQIHGFTNAKEILKLIIRPLKDNNDFKNFDWTNLVRKDNNSLN
+>CHLN_MESVI SP_AC=Q9MUM1; EMBL_AC=AAF43877.1; gene=chlN;
+MSAVTSDTITFECETGNYHTFCPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAQLNDYKELTRLCNQIKKDRNPSVIVWIGTCTTEIIKMDLEGMA
+PKIELEINTPIVVARANGLDYAFTQGEDTVLAAMVERCPAKISLDSNSNKESKNPESEQA
+PLVLFGSLPSTVASQLNLELKRQGINVSGWLPAQRYTDLPILEKGTYVCGINPFLSRTAT
+ILMRRRKCKLIGAPFPIGPDGTRAWIEKICSVFNIQPQNLDERENQVWQSLEDYLQLVRG
+KSVFFMGDNLLEISLARFLIKCGMIVYEIGIPYMDKRYQAAELALLEKHCNDMNVPMPRI
+VEKPDNYNQIQRIKELQPDLAITGMAHANPLEARGISTKWSVEFTFAQIHGFTNARDILE
+LVTRPLRRNNSLEGLGWNSLVKENIK
+>CHLN_PHYPA SP_AC=Q6YXP4; EMBL_AC=BAC85097.1; gene=chlN;
+MSNKISETLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAQLNDYKELKRLCLQIKKDRNPSVIIWIGTCTTEIIKMDLEGMA
+PKLENELGIPIVVARANGLDYAFTQGEDTVLAAMAHRCPEQNTLLDNKKVIQQDSTIQDF
+FSFLSLEKKEETRNNSSIKSKKHPPLVLFGSLPSTVASQLSSELKRQSVQVSGWLPAQRY
+TDLPSLGDQVYVCGVNPFLSRTATTLMRRRKCKLIGAPFPIGPDGTRAWIEKICSVFNIK
+TKDLEQREQQIWENLKDYLDLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYLDK
+RYQAAELLFLQNTCKSMGIPMPRIVEKPDNYNQIQRMRELQPDLAITGMAHANPLEARGI
+NTKWSVEFTFAQIHGFTNARDVLELVTRPLRRNNNLENLGWNDLTKKEKQIKFN
+>CHLN_PINKO SP_AC=Q85WU5; EMBL_AC=AAO74124.1; gene=chlN;
+MSTKIDETITFECETGNYHTFCPISCVSWLYQKIEDSFFLVVGTKTCGYFLQNALGVMIF
+AEPRYAMAELEEGDISAHLNDYEELKTLCIRIRKDRDPSVIIWIGTCTTEIIKMDLEGMA
+PKLEYEIGVPILVARANGLDYAFTQGEDTVLAVMAHRCPEQEFPIGESKETKTKTKLFPF
+PLLKEKKLVEYANHPPLVIFGSLPSNLVSQLDTELRRQFIKVSGWLPAQRYADLPSLGDG
+VYVCGVNPFLSRTATTLIRRKKCELIVAPFPIGPDGTRAWIERICPVFGIEAQSLEEREE
+RIWESLKDYLDLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYMDKRYQAAELAL
+LKDTCIRMCIPIPRIVEKPDNSNQIRRMRELQPDLAITGMAHANPLGARGIGTKWSVEFT
+FAQIHGFANARDVLELVTRPLRRNENLDNLDRTTLVRNNNEFYTSTPTPR
+>CHLN_STAPU SP_AC=Q32RZ8; EMBL_AC=AAX45693.1; gene=chlN;
+MYFQKKETFFMPLTKDTLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFL
+QNALGVMIFAEPRYAMAELEEGDISAQLNDYEELKRLCSQIKKDRNPSVIVWIGTCTTEI
+IKMDLEGMAPRLEAEIDIPIVVARANGLDYAFTQGEDTVLAAMAHRCPDINSVTQNINIE
+DNGRERLLSFLPSKEKASNERKNESTHPPLVLFGSLPSNVTSQLTLELKKQNIDVSGWLP
+SQRYAELPSVGEGVYVCGVNPFLSRTATTLMRRRKCKLIGAPFPIGPDGTRAWIEKICSV
+FGIQPIGLEEREKQIWNSLQDYLNLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIP
+YMDKRYQAAELALLEKTCQEMNVSLPRIVEKPDNYNQVQRMRELQPDLAITGMAHANPLE
+ARGISTKWSVEFTFAQIHGFTNARDILELVTRPLRRNLSLEQLGWTGLVKRNKLTA
+>CHLN_ZYGCR SP_AC=Q32RK6; EMBL_AC=AAX45806.1; gene=chlN;
+MSSKQVPDTLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVVGTKTCGYFLQNALGVMI
+FAEPRYAMAELEEGDISAQLNDYEELKRLCVQIKKDRNPSVIVWIGTCTTEIIKMDLEGM
+APRLEAEIDIPIVVARANGLDYAFTQGEDTVLAAMANRCPEWIQNAQNNNDQDQAIQGLM
+SFFPLKNTKLSSEPTLLSNHPPLVLFGSLPSNVASQITLELKRQNIHVSGWLPAQRYSEL
+PSVGEGVYVCGVNPFLSRTATTLMRRRKCKLIGAPFPIGPDGTRAWIEKICSVFGIEPQG
+LEEREAQVWKGLQDYLDLVRGKSVFFMGDNLLEVSLARFLIRCGMIVYEIGIPYMDKRYQ
+AAELALLQQTCEQMGTPMPRIVEKPDNYNQVQRMRELQPDLAITGMAHANPLEARGISTK
+WSVEFTFAQIHGFTNARDILELVTRPLRRNLSLEDLGWSALVKRDKINLV