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Switch to a swissprot based reference database for CDS annotation

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Former-commit-id: 3da31ce8a135394ecac041291134d61f11f06d8f
Former-commit-id: 406f41a7cb2db14ea832480b86f72a11d3b0ab4a
This commit is contained in:
Eric Coissac
2022-02-16 22:50:17 +01:00
parent 90b3ee9b04
commit 831669433e
644 changed files with 25433 additions and 485597 deletions
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data/cds/sp_chlorodb/shell/ftsI.fst Normal file
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>FTSIH_CHLAT SP_AC=A2CI41; EMBL_AC=ABM87954.1; gene=ftsI;
MKPYEPKSWVTRVFLVWWLTALSCFFISGRLIYLQLLKGKWLKEKALKQQTVTLKTFQPR
RNICDRNGIPLAIDTLAYDVFAHPLYFSISIEEVANKLSPILCIDSLSIQKLLKPTSTGI
CLASQLPENTGKLIASLRLDGIDLIKHPKRYYPYKEIVGNVIGYVDTSHQGQAGIELSCQ
ESLQLNSPTLTSSIDGRGVLISHQIPKELFIQDNLSLQLTLDLELQKIAYKALKQGLENC
KGKRGTVLILDPKTGGILTLVALPSYDPNIYYDFPIERFKPWPVTDLYEPGSTFKPLNIA
IALETKAISPEDSFYDEGCIRVGDSIITNNDYNSYKPLPCLPNTYNKIVKLLANSSNVGM
VHILERIAPEIYHSWLSKLDLGHAASPLETDLPWASESSLKDINEFVCYEIEPAAASFGQ
GLAMTPIKLAQLYASLANGGILVKPYLVTGLANAAEDTQKAKGIDLPSYNIRKKNLGNHL
SWHKAEPSYLFLKRSGIRVTDLLRHIKAEGRFALPFRKNLLQLFTQDAHRTTELQLEPKA
HQPQLLRPTRHAVYATNQSKRVFSHETTKLLLDMLEDVIWNGTGSSCFVEGYRIGGKTGT
SQKHTQEGGYSKTKIITSFAAIFPTEDPQYVILTVIDEPNIPLSFGSNTAAPIVKSIIES
LIDIKKMKPTIPIIKVKKD
>FTSIH_MESVI SP_AC=Q9MUV9; EMBL_AC=AAF43792.1; gene=ftsI;
MNKKKIFGFSRIVLVWILFFSGSSLLLGRLFYLQVMKGSWLTNKAKNQQTIILNTFQPRR
TICDRNGIPLAIDTLAYDIFAHPLHFKKSTFDIANELYSILNLDVEYLQNLFIKNTTGIC
IAHQAPEQIANQIIAKNIEGIELVQHPKRYYPYKQLCADVIGYVNTLHEGQAGLELSCQE
SLQLQSPEVVSAIDGRGFLINDGIPRELFKQDSLCLQLTIDLDLQKASYLAIYDGIKKCN
AKRGTVIILDPYTGAILALVTAPSYDPNVYYDFPIERFKNWPVIDLYEPGSTFKPINMAI
ALEAKAIKKNDFFYDEGCIQISDTIITNNNYYNKQFACDKNSHLNITDVLSNSSNVGMVH
ILQRLAPEIYYQWIQKLGLGNNVFLETDFPLSSYSSLKNILEFTSYNIESAVTSFGQGLA
MTPIKLAQLYACLSNGGNIIRPYIVDGLFDIQNEKLFTLNNNIFDQNISLKRKLLKTKVF
SPSTTEIVLDMLEEVIFNGTGSSCFLPGYRIGGKTGTSQKHAEQGGYSTKHILTSFAAIF
PINNPQYVILSVIDEPSIPLSFGSNTAGPVVRSIIESLIRIKKIPPSIPTLTHHYYCK