Files
annotate/data/rrna/RRNA_5S/00035_RRNA5S_NC_023113_8.align.fasta
Eric Coissac 01c5880ace First version including the rRNA detector
Former-commit-id: 865e2626c7cd92ea596aedefe2b760b3eaaa9c77
Former-commit-id: 94a2e642328eb679660c6ac5a6cb6803c2083632
2015-10-12 07:15:08 -03:00

57 lines
3.4 KiB
Plaintext

>RRNA5S_NC_024157_213 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.903226; cluster_center=False;
ATCCTGGCGCCGAGCTATTTTCCCGCAGGGCTCCCCCTGCAGTATCGTCACCGCAGTAGA
GTTTCACCACCAAGTTCGGGATGGATCGGTGTGGTTCCTCCACGCCTAAGACACCAGAAT
ATC
>RRNA5S_NC_024845_25 count=2; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.958678; cluster_center=False;
ATCCTGGCGTCGAACTATTTTTCCACAGGACCTCCCCTACAGTATCGTCACCACAGTCGA
GTTTAACCACCAAATTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_024106_13 count=4; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.966942; cluster_center=False;
ATTCTGGCATCGAGCTATTTTGCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAATTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_023356_226 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.983471; cluster_center=False;
ATTCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCCGAAT
A--
>RRNA5S_NC_018541_28 count=2; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991736; cluster_center=False;
ATTCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_019616_219 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.958678; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTCCAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAATTCGG--TGGAT-GGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_012224_217 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.983471; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCTTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
---
>RRNA5S_NC_016736_218 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991736; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCTTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_023102_212 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991736; cluster_center=False;
ATCCTGGCATCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_023464_214 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991736; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAATTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_025641_216 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991736; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGGTTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_016468_220 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991736; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCTCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_023113_8 count=17; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=1.000000; cluster_center=True;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
A--
>RRNA5S_NC_013707_215 count=1; cluster_weight=35; cluster=RRNA5S_NC_023113_8; cluster_score=0.991803; cluster_center=False;
ATCCTGGCGTCGAGCTATTTTTCCGCAGGACCTCCCCTACAGTATCGTCACCGCAGTAGA
GTTTAACCACCAAGTTCGGGATGGATTGGTGTGGTTCCTCTACGCCTAGGACACCAGAAT
AT-