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install ROBIBarcodes, ROBITAxonomy, ROBITools, ROBIUtils #1

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opened 2016-06-03 06:48:33 +00:00 by lucile.muneret · 1 comment
lucile.muneret commented 2016-06-03 06:48:33 +00:00 (Migrated from git.metabarcoding.org)
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Hi,
When I try to install R packages, R returns this message.
Do you know these errors and a way to contourn them ?

install.packages("~/ROBIBarcodes-master-c79ba4eac9bc0d8e868032671392aff6aba454e6.zip", repos = NULL, type = "win.binary")
Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
library(ROBIBarcodes-master-c79ba4eac9bc0d8e868032671392aff6aba454e6)
Error in library(ROBIBarcodes - master - c79ba4eac9bc0d8e868032671392aff6aba454e6) :
'package' doit être de longueur unaire

install.packages("~/ROBITaxonomy-master-05efb38fed446afa73bcfe159280b0c5ca1a69cd.zip", repos = NULL, type = "win.binary")
Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
library(ROBITaxonomy-master-05efb38fed446afa73bcfe159280b0c5ca1a69cd)
Error: unexpected input in "library(ROBITaxonomy-master-05ef"

install.packages("~/ROBITools-master-ffa9638359dc393da36ded88753129186cf9669b.zip", repos = NULL, type = "win.binary")
Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
Warning in install.packages :
cannot open compressed file 'ROBITools-master-ffa9638359dc393da36ded88753129186cf9669b/DESCRIPTION', probable reason 'No such file or directory'
Error in install.packages : cannot open the connection
library(ROBITools-master-ffa9638359dc393da36ded88753129186cf9669b)
Error in library(ROBITools - master - ffa9638359dc393da36ded88753129186cf9669b) :
'package' doit être de longueur unaire

install.packages("~/ROBIUtils-master-1b1a8daf7393c0d6baa7853fd5a270ebf2f5ec85.zip", repos = NULL, type = "win.binary")
Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’
(as ‘lib’ is unspecified)
libary(ROBIUtils-master-1b1a8daf7393c0d6baa7853fd5a270ebf2f5ec85)
Error: unexpected symbol in "libary(ROBIUtils-master-1b1a8daf7393c0d6baa7853fd5a270ebf2f5ec85"

Thank you for your help,

Lucile Muneret

Hi, When I try to install R packages, R returns this message. Do you know these errors and a way to contourn them ? > install.packages("~/ROBIBarcodes-master-c79ba4eac9bc0d8e868032671392aff6aba454e6.zip", repos = NULL, type = "win.binary") Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’ (as ‘lib’ is unspecified) > library(ROBIBarcodes-master-c79ba4eac9bc0d8e868032671392aff6aba454e6) Error in library(ROBIBarcodes - master - c79ba4eac9bc0d8e868032671392aff6aba454e6) : 'package' doit être de longueur unaire > install.packages("~/ROBITaxonomy-master-05efb38fed446afa73bcfe159280b0c5ca1a69cd.zip", repos = NULL, type = "win.binary") Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’ (as ‘lib’ is unspecified) > library(ROBITaxonomy-master-05efb38fed446afa73bcfe159280b0c5ca1a69cd) Error: unexpected input in "library(ROBITaxonomy-master-05ef" > install.packages("~/ROBITools-master-ffa9638359dc393da36ded88753129186cf9669b.zip", repos = NULL, type = "win.binary") Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’ (as ‘lib’ is unspecified) Warning in install.packages : cannot open compressed file 'ROBITools-master-ffa9638359dc393da36ded88753129186cf9669b/DESCRIPTION', probable reason 'No such file or directory' Error in install.packages : cannot open the connection > library(ROBITools-master-ffa9638359dc393da36ded88753129186cf9669b) Error in library(ROBITools - master - ffa9638359dc393da36ded88753129186cf9669b) : 'package' doit être de longueur unaire > install.packages("~/ROBIUtils-master-1b1a8daf7393c0d6baa7853fd5a270ebf2f5ec85.zip", repos = NULL, type = "win.binary") Installing package into ‘C:/Users/Lucile/Documents/R/win-library/3.2’ (as ‘lib’ is unspecified) > libary(ROBIUtils-master-1b1a8daf7393c0d6baa7853fd5a270ebf2f5ec85) Error: unexpected symbol in "libary(ROBIUtils-master-1b1a8daf7393c0d6baa7853fd5a270ebf2f5ec85" Thank you for your help, Lucile Muneret
hpgaxis commented 2017-02-18 15:14:58 +00:00 (Migrated from git.metabarcoding.org)
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I have the same problem. I cannot seem to install ROBITools, Barcodes and Taxonomy. Utils installed with no issue!
Have you been able to sort this problem out?
Whenever I try to install one of these packages, I get the error message "package ‘X' is not available (for R version 3.2.3)" .
Is there a specific version of R that I should use?

I have the same problem. I cannot seem to install ROBITools, Barcodes and Taxonomy. Utils installed with no issue! Have you been able to sort this problem out? Whenever I try to install one of these packages, I get the error message "package ‘X' is not available (for R version 3.2.3)" . Is there a specific version of R that I should use?
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Reference: obitools/ROBIUtils#1