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add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column

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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@11 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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Eric Coissac
2007-03-27 16:29:20 +00:00
parent b2c307e611
commit 8c91d3d8f3
3 changed files with 34 additions and 4 deletions
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src/libecoPCR/ecoPCR.h
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@@ -224,6 +224,7 @@ char *getSubSequence(char* nucAcSeq,int32_t begin,int32_t end);
ecotx_t *eco_getspecies(ecotx_t *taxon,ecotaxonomy_t *taxonomy);
ecotx_t *eco_getgenus(ecotx_t *taxon,ecotaxonomy_t *taxonomy);
ecotx_t *eco_getfamily(ecotx_t *taxon,ecotaxonomy_t *taxonomy);
ecotx_t *eco_getkingdom(ecotx_t *taxon,ecotaxonomy_t *taxonomy);
ecotx_t *eco_getsuperkingdom(ecotx_t *taxon,ecotaxonomy_t *taxonomy);
#endif /*ECOPCR_H_*/