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Initial version of ecoPCR

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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@5 60f365c0-8329-0410-b2a4-ec073aeeaa1d
This commit is contained in:
Eric Coissac
2007-02-15 13:33:32 +00:00
parent f3d2273d8d
commit ebe8c0b516
39 changed files with 5568 additions and 0 deletions
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src/libapat/libstki.h
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/* ==================================================== */
/* Copyright (c) Atelier de BioInformatique */
/* Mar. 92 */
/* File: libstki.h */
/* Purpose: library of dynamic stacks holding */
/* integer values */
/* History: */
/* 00/03/92 : <Gloup> first draft */
/* 07/07/93 : <Gloup> complete revision */
/* 10/03/94 : <Gloup> added xxxVector funcs */
/* 14/05/99 : <Gloup> last revision */
/* ==================================================== */
#ifndef _H_Gtypes
#include "Gtypes.h"
#endif
#define _H_libstki
/* ==================================================== */
/* Constantes de dimensionnement */
/* ==================================================== */
#ifndef kMinStackiSize
#define kMinStackiSize 2 /* taille mini stack */
#endif
#define kStkiNoErr 0 /* ok */
#define kStkiMemErr 1 /* not enough memory */
#define kStkiReset Vrai
#define kStkiGet Faux
/* ==================================================== */
/* Macros standards */
/* ==================================================== */
#ifndef NEW
#define NEW(typ) (typ*)malloc(sizeof(typ))
#define NEWN(typ, dim) (typ*)malloc((unsigned long)(dim) * sizeof(typ))
#define REALLOC(typ, ptr, dim) (typ*)realloc((void *) (ptr), (unsigned long)(dim) * sizeof(typ))
#define FREE(ptr) free((Ptr) ptr)
#endif
/* ==================================================== */
/* Types & Structures de donnees */
/* ==================================================== */
/* -------------------- */
/* structure : pile */
/* -------------------- */
typedef struct Stacki {
/* ---------------------*/
Int32 size; /* stack size */
Int32 top; /* current free pos. */
Int32 cursor; /* current cursor */
Int32 *val; /* values */
/* ---------------------*/
} Stacki, *StackiPtr, **StackiHdle;
/* ==================================================== */
/* Prototypes (generated by mproto) */
/* ==================================================== */
/* libstki.c */
Int16 StkiError (Bool reset );
StackiPtr NewStacki (Int32 size );
StackiPtr FreeStacki (StackiPtr stki );
StackiHdle NewStackiVector (Int32 vectSize, Int32 stackSize );
StackiHdle FreeStackiVector (StackiHdle stkh, Int32 vectSize );
Int32 ResizeStacki (StackiHdle stkh , Int32 size );
Bool PushiIn (StackiHdle stkh , Int32 val );
Bool PopiOut (StackiHdle stkh , Int32 *val );
Bool ReadiDown (StackiPtr stki , Int32 *val );
Bool ReadiUp (StackiPtr stki , Int32 *val );
void CursiToTop (StackiPtr stki );
void CursiToBottom (StackiPtr stki );
void CursiSwap (StackiPtr stki );
Bool SearchDownStacki (StackiPtr stki , Int32 sval );
Bool BinSearchStacki (StackiPtr stki , Int32 sval );
Bool SameStacki (StackiPtr stki1 , StackiPtr stki2 );
Bool ReverseStacki (StackiPtr stki );