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Refactoring related to iterators

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This commit is contained in:
Eric Coissac
2022-11-16 17:13:03 +01:00
parent 6f853da9df
commit 09fc426b67
29 changed files with 95 additions and 93 deletions
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6
pkg/obitools/obidistribute/distribute.go
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@@ -40,11 +40,11 @@ func DistributeSequence(sequences obiiter.IBioSequenceBatch) {
switch obiconvert.CLIOutputFormat() {
case "fastq":
formater = obiformats.WriteFastqBatchToFile
formater = obiformats.WriteFastqToFile
case "fasta":
formater = obiformats.WriteFastaBatchToFile
formater = obiformats.WriteFastaToFile
default:
formater = obiformats.WriteSequencesBatchToFile
formater = obiformats.WriteSequencesToFile
}
dispatcher := sequences.Distribute(CLISequenceClassifier(),