Patch sequence writers to remove definition from header when json format is used.

Former-commit-id: a8a74cccb52d577d4ea1c0ad88b121a8e511149d
2025-12-08 16:50:27 +00:00 · 2023-10-05 07:31:31 +02:00
parent d23a911080
commit 0a8f7afb2a
5 changed files with 27 additions and 27 deletions
--- a/pkg/obiformats/fastseq_write_fastq.go
+++ b/pkg/obiformats/fastseq_write_fastq.go
@@ -32,9 +32,8 @@ func FormatFastq(seq *obiseq.BioSequence, quality_shift int, formater FormatHead
 		info = formater(seq)
 	}

-	return fmt.Sprintf("@%s %s %s\n%s\n+\n%s",
+	return fmt.Sprintf("@%s %s\n%s\n+\n%s",
 		seq.Id(), info,
-		seq.Definition(),
 		string(seq.Sequence()),
 		string(ascii),
 	)